RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC3-210ENST00000617904 Q8NDZ9 215 aa10.78□□□□□ -0.68
TRAPPC3-210ENST00000617904 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
TRAPPC3-210ENST00000617904 HSPG2P98160 4391 aa10.77□□□□□ -0.68
TRAPPC3-210ENST00000617904 H3BQ85 93 aa10.77□□□□□ -0.69
TRAPPC3-210ENST00000617904 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC3-210ENST00000617904 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
TRAPPC3-210ENST00000617904 A0A096LNI7 61 aa10.76□□□□□ -0.69
TRAPPC3-210ENST00000617904 IGLV5-52A0A0A0MRZ9 124 aa10.76□□□□□ -0.69
TRAPPC3-210ENST00000617904 PRYO14603 147 aa10.76□□□□□ -0.69
TRAPPC3-210ENST00000617904 COX7BP24311 80 aa10.76□□□□□ -0.69
TRAPPC3-210ENST00000617904 TNP2Q05952 138 aa10.76□□□□□ -0.69
TRAPPC3-210ENST00000617904 J3QR89 54 aa10.75□□□□□ -0.69
TRAPPC3-210ENST00000617904 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
TRAPPC3-210ENST00000617904 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
TRAPPC3-210ENST00000617904 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
TRAPPC3-210ENST00000617904 C22orf24Q9Y442 160 aa10.75□□□□□ -0.69
TRAPPC3-210ENST00000617904 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
TRAPPC3-210ENST00000617904 LRP1BQ9NZR2 4599 aa10.73□□□□□ -0.69
TRAPPC3-210ENST00000617904 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
TRAPPC3-210ENST00000617904 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
TRAPPC3-210ENST00000617904 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
TRAPPC3-210ENST00000617904 LINC00167Q96N53 147 aa10.71□□□□□ -0.69
TRAPPC3-210ENST00000617904 ORMDL1Q9P0S3 153 aa10.71□□□□□ -0.69
TRAPPC3-210ENST00000617904 PRO0461Q9UI25 63 aa10.71□□□□□ -0.69
TRAPPC3-210ENST00000617904 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
TRAPPC3-210ENST00000617904 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
TRAPPC3-210ENST00000617904 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
TRAPPC3-210ENST00000617904 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 K7ERU9 68 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 BAALC-AS2P0C853 105 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 INAFM2P0DMQ5 153 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 UBE2BP63146 152 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 LINC01600Q96MT4 127 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
TRAPPC3-210ENST00000617904 A0A087WYN8 130 aa10.68□□□□□ -0.7
TRAPPC3-210ENST00000617904 ETDBQ3ZM63 59 aa10.67□□□□□ -0.7
TRAPPC3-210ENST00000617904 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
TRAPPC3-210ENST00000617904 DHRS4-AS1Q9P1J3 65 aa10.67□□□□□ -0.7
TRAPPC3-210ENST00000617904 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
TRAPPC3-210ENST00000617904 TMEM256-PLSCR3K7ERE1 68 aa10.66□□□□□ -0.7
TRAPPC3-210ENST00000617904 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
TRAPPC3-210ENST00000617904 PPDPFLQ8WWR9 84 aa10.65□□□□□ -0.7
TRAPPC3-210ENST00000617904 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.71
TRAPPC3-210ENST00000617904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC3-210ENST00000617904 SPACA4Q8TDM5 124 aa10.64□□□□□ -0.71
TRAPPC3-210ENST00000617904 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
TRAPPC3-210ENST00000617904 CHTF8P0CG12 524 aa10.63□□□□□ -0.71
TRAPPC3-210ENST00000617904 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC3-210ENST00000617904 DNAH5Q8TE73 4624 aa10.62□□□□□ -0.71
TRAPPC3-210ENST00000617904 LINC00528Q8N1L1 170 aa10.61□□□□□ -0.71
TRAPPC3-210ENST00000617904 SPRR1AP35321 89 aa10.6□□□□□ -0.71
TRAPPC3-210ENST00000617904 Q8N1X5 172 aa10.6□□□□□ -0.71
TRAPPC3-210ENST00000617904 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
TRAPPC3-210ENST00000617904 Q6ZRX8 168 aa10.59□□□□□ -0.71
TRAPPC3-210ENST00000617904 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.71
TRAPPC3-210ENST00000617904 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.71
TRAPPC3-210ENST00000617904 B5MCH6 92 aa10.58□□□□□ -0.72
TRAPPC3-210ENST00000617904 Q6ZQY7 126 aa10.58□□□□□ -0.72
TRAPPC3-210ENST00000617904 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
TRAPPC3-210ENST00000617904 FAM19A1Q7Z5A9 133 aa10.57□□□□□ -0.72
TRAPPC3-210ENST00000617904 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
TRAPPC3-210ENST00000617904 PLAC8Q9NZF1 115 aa10.56□□□□□ -0.72
TRAPPC3-210ENST00000617904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC3-210ENST00000617904 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
TRAPPC3-210ENST00000617904 UBE2AP49459 152 aa10.54□□□□□ -0.72
TRAPPC3-210ENST00000617904 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
TRAPPC3-210ENST00000617904 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC3-210ENST00000617904 H0Y9J4 135 aa10.53□□□□□ -0.72
TRAPPC3-210ENST00000617904 TEX49A0A1B0GTD5 131 aa10.51□□□□□ -0.73
TRAPPC3-210ENST00000617904 BCE1O60756 84 aa10.51□□□□□ -0.73
TRAPPC3-210ENST00000617904 PANO1I0J062 215 aa10.48□□□□□ -0.73
TRAPPC3-210ENST00000617904 ACYP1P07311 99 aa10.48□□□□□ -0.73
TRAPPC3-210ENST00000617904 PDE6GP18545 87 aa10.48□□□□□ -0.73
TRAPPC3-210ENST00000617904 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.733e-8■□□□□ 8.2
TRAPPC3-210ENST00000617904 RBM3P98179 157 aaKnown RBP10.47□□□□□ -0.73
TRAPPC3-210ENST00000617904 DSCR8Q96T75 97 aa10.46□□□□□ -0.73
TRAPPC3-210ENST00000617904 HIGD2AQ9BW72 106 aa10.46□□□□□ -0.73
TRAPPC3-210ENST00000617904 Q9BRP9 147 aa10.45□□□□□ -0.74
TRAPPC3-210ENST00000617904 F8WEM9 126 aa10.44□□□□□ -0.74
TRAPPC3-210ENST00000617904 XGP55808 180 aa10.44□□□□□ -0.74
TRAPPC3-210ENST00000617904 NDUFV3P56181 108 aaKnown RBP10.44□□□□□ -0.74
TRAPPC3-210ENST00000617904 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
TRAPPC3-210ENST00000617904 VPS25Q9BRG1 176 aa10.44□□□□□ -0.74
TRAPPC3-210ENST00000617904 PRLHP81277 87 aa10.43□□□□□ -0.74
TRAPPC3-210ENST00000617904 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
TRAPPC3-210ENST00000617904 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
TRAPPC3-210ENST00000617904 ZNF706Q9Y5V0 76 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC3-210ENST00000617904 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
TRAPPC3-210ENST00000617904 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
TRAPPC3-210ENST00000617904 FAT1Q14517 4588 aa10.4□□□□□ -0.74
TRAPPC3-210ENST00000617904 KRTAP10-1P60331 282 aa10.4□□□□□ -0.74
TRAPPC3-210ENST00000617904 Q6ZSA8 131 aa10.4□□□□□ -0.74
TRAPPC3-210ENST00000617904 C14orf132Q9NPU4 83 aa10.4□□□□□ -0.74
TRAPPC3-210ENST00000617904 C1orf137Q5JT78 98 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms