RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 COL7A1Q02388 2944 aa13.1□□□□□ -0.31
PCDHA13-203ENST00000617769 TMEM258P61165 79 aa13.09□□□□□ -0.31
PCDHA13-203ENST00000617769 MDFIQ99750 246 aa13.09□□□□□ -0.31
PCDHA13-203ENST00000617769 J3KT08 172 aa13.08□□□□□ -0.32
PCDHA13-203ENST00000617769 LINC01556Q5JQF7 62 aa13.08□□□□□ -0.32
PCDHA13-203ENST00000617769 LYSTQ99698 3801 aa13.08□□□□□ -0.32
PCDHA13-203ENST00000617769 TRAV10A0A0B4J240 114 aa13.07□□□□□ -0.32
PCDHA13-203ENST00000617769 LINC00588Q9Y4M8 146 aa13.06□□□□□ -0.32
PCDHA13-203ENST00000617769 SYCNQ0VAF6 134 aa13.05□□□□□ -0.32
PCDHA13-203ENST00000617769 CXCL6P80162 114 aa13.05□□□□□ -0.32
PCDHA13-203ENST00000617769 SCXQ7RTU7 201 aa13.05□□□□□ -0.32
PCDHA13-203ENST00000617769 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
PCDHA13-203ENST00000617769 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
PCDHA13-203ENST00000617769 DPH3Q96FX2 82 aa13.03□□□□□ -0.32
PCDHA13-203ENST00000617769 SERTAD4-AS1Q5TG53 156 aa13.02□□□□□ -0.33
PCDHA13-203ENST00000617769 RPS28P62857 69 aaKnown RBP13.01□□□□□ -0.33
PCDHA13-203ENST00000617769 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
PCDHA13-203ENST00000617769 NKAPP1Q8N9T2 125 aa13□□□□□ -0.33
PCDHA13-203ENST00000617769 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
PCDHA13-203ENST00000617769 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
PCDHA13-203ENST00000617769 FAM19A5Q7Z5A7 132 aaPredicted RBP12.99□□□□□ -0.33
PCDHA13-203ENST00000617769 TRAV7A0A075B6U4 112 aa12.98□□□□□ -0.33
PCDHA13-203ENST00000617769 C7orf33Q8WU49 177 aa12.98□□□□□ -0.33
PCDHA13-203ENST00000617769 DNAH1Q9P2D7 4330 aa12.98□□□□□ -0.33
PCDHA13-203ENST00000617769 F8WDY8 70 aa12.98□□□□□ -0.33
PCDHA13-203ENST00000617769 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
PCDHA13-203ENST00000617769 BCE1O60756 84 aa12.97□□□□□ -0.33
PCDHA13-203ENST00000617769 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
PCDHA13-203ENST00000617769 OXTP01178 125 aa12.94□□□□□ -0.34
PCDHA13-203ENST00000617769 RPL37AP8A6NKH3 93 aa12.93□□□□□ -0.34
PCDHA13-203ENST00000617769 FAM168BA1KXE4 195 aa12.92□□□□□ -0.34
PCDHA13-203ENST00000617769 Q8N377 158 aa12.92□□□□□ -0.34
PCDHA13-203ENST00000617769 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
PCDHA13-203ENST00000617769 Q8N9L7 120 aa12.91□□□□□ -0.34
PCDHA13-203ENST00000617769 TENM2Q9NT68 2774 aa12.9□□□□□ -0.34
PCDHA13-203ENST00000617769 C3orf84H3BNL1 204 aa12.9□□□□□ -0.34
PCDHA13-203ENST00000617769 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
PCDHA13-203ENST00000617769 H7BZZ5 65 aa12.89□□□□□ -0.35
PCDHA13-203ENST00000617769 SNURFQ9Y675 71 aa12.89□□□□□ -0.35
PCDHA13-203ENST00000617769 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
PCDHA13-203ENST00000617769 NREPQ16612 68 aa12.88□□□□□ -0.35
PCDHA13-203ENST00000617769 KLKP1Q107X0 134 aa12.87□□□□□ -0.35
PCDHA13-203ENST00000617769 Q6ZRX8 168 aa12.87□□□□□ -0.35
PCDHA13-203ENST00000617769 Q9BRP9 147 aa12.87□□□□□ -0.35
PCDHA13-203ENST00000617769 DNAH7Q8WXX0 4024 aa12.86□□□□□ -0.35
PCDHA13-203ENST00000617769 RMI2Q96E14 147 aa12.86□□□□□ -0.35
PCDHA13-203ENST00000617769 PLA2G2DQ9UNK4 145 aa12.86□□□□□ -0.35
PCDHA13-203ENST00000617769 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
PCDHA13-203ENST00000617769 KRTAP4-16G5E9R7 235 aaPredicted RBP12.85□□□□□ -0.35
PCDHA13-203ENST00000617769 IGLV5-48A0A075B6I7 105 aa12.84□□□□□ -0.35
PCDHA13-203ENST00000617769 KRTAP7-1Q8IUC3 87 aa12.84□□□□□ -0.35
PCDHA13-203ENST00000617769 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
PCDHA13-203ENST00000617769 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.35
PCDHA13-203ENST00000617769 IGKV4-1P06312 121 aa12.83□□□□□ -0.35
PCDHA13-203ENST00000617769 FAM236CP0DP71 79 aa12.83□□□□□ -0.35
PCDHA13-203ENST00000617769 BPY2O14599 106 aa12.83□□□□□ -0.36
PCDHA13-203ENST00000617769 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
PCDHA13-203ENST00000617769 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
PCDHA13-203ENST00000617769 ST20-AS1Q8NBB2 130 aa12.82□□□□□ -0.36
PCDHA13-203ENST00000617769 PRYO14603 147 aa12.81□□□□□ -0.36
PCDHA13-203ENST00000617769 SPRR1AP35321 89 aa12.8□□□□□ -0.36
PCDHA13-203ENST00000617769 IGLV5-37A0A075B6J1 123 aa12.8□□□□□ -0.36
PCDHA13-203ENST00000617769 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
PCDHA13-203ENST00000617769 F8WEM9 126 aa12.78□□□□□ -0.36
PCDHA13-203ENST00000617769 A0A1W2PNM2 257 aa12.77□□□□□ -0.37
PCDHA13-203ENST00000617769 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.37
PCDHA13-203ENST00000617769 ERC2-IT1O76042 136 aa12.77□□□□□ -0.37
PCDHA13-203ENST00000617769 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHA13-203ENST00000617769 B9D2Q9BPU9 175 aa12.77□□□□□ -0.37
PCDHA13-203ENST00000617769 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
PCDHA13-203ENST00000617769 TNP2Q05952 138 aa12.75□□□□□ -0.37
PCDHA13-203ENST00000617769 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
PCDHA13-203ENST00000617769 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
PCDHA13-203ENST00000617769 PRKDCP78527 4128 aaKnown RBP12.74□□□□□ -0.37
PCDHA13-203ENST00000617769 DNHD1Q96M86 4753 aa12.73□□□□□ -0.37
PCDHA13-203ENST00000617769 UBE2BP63146 152 aa12.72□□□□□ -0.37
PCDHA13-203ENST00000617769 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
PCDHA13-203ENST00000617769 TMEM254Q8TBM7 123 aa12.72□□□□□ -0.37
PCDHA13-203ENST00000617769 Q5XG85 94 aa12.71□□□□□ -0.37
PCDHA13-203ENST00000617769 OCR1Q9BZK8 76 aa12.71□□□□□ -0.38
PCDHA13-203ENST00000617769 C4orf26Q17RF5 130 aa12.7□□□□□ -0.38
PCDHA13-203ENST00000617769 Q8NBF4 154 aa12.69□□□□□ -0.38
PCDHA13-203ENST00000617769 SERP1Q9Y6X1 66 aa12.69□□□□□ -0.38
PCDHA13-203ENST00000617769 A0A1B0GW54 56 aa12.68□□□□□ -0.38
PCDHA13-203ENST00000617769 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
PCDHA13-203ENST00000617769 PSCAO43653 123 aa12.67□□□□□ -0.38
PCDHA13-203ENST00000617769 NDUFC1O43677 76 aa12.67□□□□□ -0.38
PCDHA13-203ENST00000617769 EPM2AB3EWF7 344 aa12.67□□□□□ -0.38
PCDHA13-203ENST00000617769 STARD9Q9P2P6 4700 aa12.66□□□□□ -0.38
PCDHA13-203ENST00000617769 MEGF8Q7Z7M0 2845 aa12.65□□□□□ -0.38
PCDHA13-203ENST00000617769 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
PCDHA13-203ENST00000617769 C5orf47Q569G3 176 aa12.64□□□□□ -0.39
PCDHA13-203ENST00000617769 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.64□□□□□ -0.39
PCDHA13-203ENST00000617769 IGKV2-24A0A0C4DH68 120 aa12.63□□□□□ -0.39
PCDHA13-203ENST00000617769 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
PCDHA13-203ENST00000617769 A0A096LNI7 61 aa12.62□□□□□ -0.39
PCDHA13-203ENST00000617769 A0A0G2JQZ4 141 aa12.62□□□□□ -0.39
PCDHA13-203ENST00000617769 A0A1W2PNN7 141 aa12.62□□□□□ -0.39
PCDHA13-203ENST00000617769 HRCT1Q6UXD1 115 aa12.62□□□□□ -0.39
PCDHA13-203ENST00000617769 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms