RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
PCDHGA9-202ENST00000616887 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
PCDHGA9-202ENST00000616887 IBA57-AS1B1ANH7 110 aa7.67□□□□□ -1.18
PCDHGA9-202ENST00000616887 NDUFC1O43677 76 aa7.67□□□□□ -1.18
PCDHGA9-202ENST00000616887 LYSTQ99698 3801 aa7.67□□□□□ -1.18
PCDHGA9-202ENST00000616887 Q6ZVQ6 151 aa7.66□□□□□ -1.18
PCDHGA9-202ENST00000616887 Q8IZM0 81 aa7.66□□□□□ -1.18
PCDHGA9-202ENST00000616887 Q6ZQT0 140 aa7.66□□□□□ -1.18
PCDHGA9-202ENST00000616887 C10orf25Q5T742 122 aa7.65□□□□□ -1.18
PCDHGA9-202ENST00000616887 SCXQ7RTU7 201 aa7.65□□□□□ -1.18
PCDHGA9-202ENST00000616887 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.19
PCDHGA9-202ENST00000616887 ATP5EP56381 51 aaPredicted RBP7.65□□□□□ -1.19
PCDHGA9-202ENST00000616887 LAMTOR3Q9UHA4 124 aa7.64□□□□□ -1.19
PCDHGA9-202ENST00000616887 PRR34Q9NV39 138 aa7.64□□□□□ -1.19
PCDHGA9-202ENST00000616887 ESRGQ1W209 222 aa7.63□□□□□ -1.19
PCDHGA9-202ENST00000616887 Q8NDZ9 215 aa7.63□□□□□ -1.19
PCDHGA9-202ENST00000616887 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
PCDHGA9-202ENST00000616887 TMEM254Q8TBM7 123 aa7.63□□□□□ -1.19
PCDHGA9-202ENST00000616887 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
PCDHGA9-202ENST00000616887 C11orf45Q8TAV5 145 aa7.62□□□□□ -1.19
PCDHGA9-202ENST00000616887 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
PCDHGA9-202ENST00000616887 NREPQ16612 68 aa7.62□□□□□ -1.19
PCDHGA9-202ENST00000616887 COL7A1Q02388 2944 aa7.61□□□□□ -1.19
PCDHGA9-202ENST00000616887 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
PCDHGA9-202ENST00000616887 K7EIL1 84 aa7.61□□□□□ -1.19
PCDHGA9-202ENST00000616887 CD164Q04900 197 aa7.61□□□□□ -1.19
PCDHGA9-202ENST00000616887 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
PCDHGA9-202ENST00000616887 CXCL6P80162 114 aa7.6□□□□□ -1.19
PCDHGA9-202ENST00000616887 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
PCDHGA9-202ENST00000616887 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
PCDHGA9-202ENST00000616887 H3BNG1 76 aa7.58□□□□□ -1.2
PCDHGA9-202ENST00000616887 BPY2O14599 106 aa7.58□□□□□ -1.2
PCDHGA9-202ENST00000616887 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
PCDHGA9-202ENST00000616887 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
PCDHGA9-202ENST00000616887 LINC00575Q6W349 94 aa7.57□□□□□ -1.2
PCDHGA9-202ENST00000616887 LRCOL1A6NCL2 159 aa7.56□□□□□ -1.2
PCDHGA9-202ENST00000616887 DNAH1Q9P2D7 4330 aa7.56□□□□□ -1.2
PCDHGA9-202ENST00000616887 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
PCDHGA9-202ENST00000616887 PRYO14603 147 aa7.56□□□□□ -1.2
PCDHGA9-202ENST00000616887 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
PCDHGA9-202ENST00000616887 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
PCDHGA9-202ENST00000616887 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
PCDHGA9-202ENST00000616887 Q8N9L7 120 aa7.55□□□□□ -1.2
PCDHGA9-202ENST00000616887 XAGE1AQ9HD64 81 aa7.55□□□□□ -1.2
PCDHGA9-202ENST00000616887 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
PCDHGA9-202ENST00000616887 PRR15Q8IV56 129 aa7.54□□□□□ -1.2
PCDHGA9-202ENST00000616887 Q6ZQY7 126 aa7.53□□□□□ -1.2
PCDHGA9-202ENST00000616887 C15orf56Q8N910 161 aa7.53□□□□□ -1.2
PCDHGA9-202ENST00000616887 MUC7Q8TAX7 377 aa7.53□□□□□ -1.2
PCDHGA9-202ENST00000616887 COX17Q14061 63 aa7.53□□□□□ -1.2
PCDHGA9-202ENST00000616887 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
PCDHGA9-202ENST00000616887 IGKV2D-24A0A075B6R9 120 aa7.52□□□□□ -1.21
PCDHGA9-202ENST00000616887 Q6ZRU5 148 aa7.52□□□□□ -1.21
PCDHGA9-202ENST00000616887 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
PCDHGA9-202ENST00000616887 LINC00588Q9Y4M8 146 aa7.51□□□□□ -1.21
PCDHGA9-202ENST00000616887 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
PCDHGA9-202ENST00000616887 PDE6GP18545 87 aa7.51□□□□□ -1.21
PCDHGA9-202ENST00000616887 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
PCDHGA9-202ENST00000616887 CAMK2N2Q96S95 79 aa7.5□□□□□ -1.21
PCDHGA9-202ENST00000616887 B9D2Q9BPU9 175 aa7.5□□□□□ -1.21
PCDHGA9-202ENST00000616887 DNAH7Q8WXX0 4024 aa7.5□□□□□ -1.21
PCDHGA9-202ENST00000616887 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
PCDHGA9-202ENST00000616887 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
PCDHGA9-202ENST00000616887 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
PCDHGA9-202ENST00000616887 PSPHP1O15172 72 aa7.49□□□□□ -1.21
PCDHGA9-202ENST00000616887 Q6ZRP5 223 aa7.48□□□□□ -1.21
PCDHGA9-202ENST00000616887 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
PCDHGA9-202ENST00000616887 PRKDCP78527 4128 aaKnown RBP7.48□□□□□ -1.21
PCDHGA9-202ENST00000616887 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
PCDHGA9-202ENST00000616887 DNAH10OSP0CZ25 163 aa7.47□□□□□ -1.21
PCDHGA9-202ENST00000616887 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.21
PCDHGA9-202ENST00000616887 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.22
PCDHGA9-202ENST00000616887 IGKV4-1P06312 121 aa7.46□□□□□ -1.22
PCDHGA9-202ENST00000616887 Q1T7F1 81 aa7.45□□□□□ -1.22
PCDHGA9-202ENST00000616887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.45□□□□□ -1.22
PCDHGA9-202ENST00000616887 C1orf64Q8NEQ6 169 aa7.44□□□□□ -1.22
PCDHGA9-202ENST00000616887 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
PCDHGA9-202ENST00000616887 IGLV6-57P01721 117 aa7.42□□□□□ -1.22
PCDHGA9-202ENST00000616887 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
PCDHGA9-202ENST00000616887 VPREB1P12018 145 aa7.41□□□□□ -1.22
PCDHGA9-202ENST00000616887 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
PCDHGA9-202ENST00000616887 TRAV22A0A0B4J277 110 aa7.41□□□□□ -1.22
PCDHGA9-202ENST00000616887 A8MU10 97 aa7.41□□□□□ -1.22
PCDHGA9-202ENST00000616887 COX7BP24311 80 aa7.4□□□□□ -1.22
PCDHGA9-202ENST00000616887 SYCNQ0VAF6 134 aa7.4□□□□□ -1.22
PCDHGA9-202ENST00000616887 TGP01266 2768 aa7.4□□□□□ -1.23
PCDHGA9-202ENST00000616887 H3BQ85 93 aa7.39□□□□□ -1.23
PCDHGA9-202ENST00000616887 PRR4Q16378 134 aa7.39□□□□□ -1.23
PCDHGA9-202ENST00000616887 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 C3orf84H3BNL1 204 aa7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 DIRC1Q969H9 104 aa7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 DYNC2H1Q8NCM8 4307 aaKnown RBP7.38□□□□□ -1.23
PCDHGA9-202ENST00000616887 A8MUN3 132 aa7.37□□□□□ -1.23
PCDHGA9-202ENST00000616887 H3BS24 57 aa7.37□□□□□ -1.23
PCDHGA9-202ENST00000616887 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
PCDHGA9-202ENST00000616887 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
PCDHGA9-202ENST00000616887 NUPR2A6NF83 97 aa7.33□□□□□ -1.24
PCDHGA9-202ENST00000616887 M0R378 163 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms