RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 RMI2Q96E14 147 aa14.09□□□□□ -0.15
CLN5-203ENST00000616833 UPK3BQ9BT76 320 aa14.09□□□□□ -0.15
CLN5-203ENST00000616833 IMUPQ9GZP8 106 aa14.09□□□□□ -0.15
CLN5-203ENST00000616833 DSCR8Q96T75 97 aa14.09□□□□□ -0.15
CLN5-203ENST00000616833 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.08□□□□□ -0.15
CLN5-203ENST00000616833 IGKV2-24A0A0C4DH68 120 aa14.08□□□□□ -0.16
CLN5-203ENST00000616833 PSCAO43653 123 aa14.07□□□□□ -0.16
CLN5-203ENST00000616833 Q6JHZ5 121 aa14.07□□□□□ -0.16
CLN5-203ENST00000616833 F8WDY8 70 aa14.06□□□□□ -0.16
CLN5-203ENST00000616833 C3orf22Q8N5N4 141 aa14.05□□□□□ -0.16
CLN5-203ENST00000616833 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
CLN5-203ENST00000616833 TLX1NBP0CAT3 122 aa14.05□□□□□ -0.16
CLN5-203ENST00000616833 KCNQ1DNQ9H478 68 aa14.05□□□□□ -0.16
CLN5-203ENST00000616833 FAM19A1Q7Z5A9 133 aa14.03□□□□□ -0.16
CLN5-203ENST00000616833 TRBV7-6A0A0J9YX20 115 aa14.02□□□□□ -0.16
CLN5-203ENST00000616833 SS18L2Q9UHA2 77 aa14.01□□□□□ -0.17
CLN5-203ENST00000616833 PRKDCP78527 4128 aaKnown RBP14.01□□□□□ -0.17
CLN5-203ENST00000616833 LOC110117498A0A087WWA1 95 aa14.01□□□□□ -0.17
CLN5-203ENST00000616833 UBL5Q9BZL1 73 aa14.01□□□□□ -0.17
CLN5-203ENST00000616833 ST20-AS1Q8NBB2 130 aa14□□□□□ -0.17
CLN5-203ENST00000616833 IGLV1-50A0A075B6I6 118 aa14□□□□□ -0.17
CLN5-203ENST00000616833 B9D2Q9BPU9 175 aa14□□□□□ -0.17
CLN5-203ENST00000616833 Q9BRP9 147 aa14□□□□□ -0.17
CLN5-203ENST00000616833 A0A096LNI7 61 aa13.99□□□□□ -0.17
CLN5-203ENST00000616833 LOC107984640A0A0U1RRK4 108 aa13.99□□□□□ -0.17
CLN5-203ENST00000616833 HAMPP81172 84 aa13.99□□□□□ -0.17
CLN5-203ENST00000616833 SCXQ7RTU7 201 aa13.98□□□□□ -0.17
CLN5-203ENST00000616833 MRPL55Q7Z7F7 128 aaKnown RBP13.98□□□□□ -0.17
CLN5-203ENST00000616833 STARD9Q9P2P6 4700 aa13.97□□□□□ -0.17
CLN5-203ENST00000616833 ETDCA0A1B0GVM5 59 aa13.97□□□□□ -0.17
CLN5-203ENST00000616833 CHTF8P0CG12 524 aa13.96□□□□□ -0.17
CLN5-203ENST00000616833 TRBV7-4A0A0J9YYF1 115 aa13.95□□□□□ -0.18
CLN5-203ENST00000616833 ERC2-IT1O76042 136 aa13.95□□□□□ -0.18
CLN5-203ENST00000616833 Q8N377 158 aa13.95□□□□□ -0.18
CLN5-203ENST00000616833 Q6ZVQ6 151 aa13.95□□□□□ -0.18
CLN5-203ENST00000616833 A0A1W2PNN7 141 aa13.94□□□□□ -0.18
CLN5-203ENST00000616833 Q6ZRX8 168 aa13.94□□□□□ -0.18
CLN5-203ENST00000616833 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
CLN5-203ENST00000616833 DYNC2H1Q8NCM8 4307 aaKnown RBP13.93□□□□□ -0.18
CLN5-203ENST00000616833 DNHD1Q96M86 4753 aa13.93□□□□□ -0.18
CLN5-203ENST00000616833 KRTAP4-16G5E9R7 235 aaPredicted RBP13.93□□□□□ -0.18
CLN5-203ENST00000616833 FUSP35637 526 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLN5-203ENST00000616833 UBE2BP63146 152 aa13.92□□□□□ -0.18
CLN5-203ENST00000616833 SRRM2Q9UQ35 2752 aaKnown RBP13.91□□□□□ -0.18
CLN5-203ENST00000616833 MEGF8Q7Z7M0 2845 aa13.91□□□□□ -0.18
CLN5-203ENST00000616833 IGLV5-37A0A075B6J1 123 aa13.9□□□□□ -0.18
CLN5-203ENST00000616833 LINC01547P58512 204 aaPredicted RBP13.9□□□□□ -0.18
CLN5-203ENST00000616833 C3orf84H3BNL1 204 aa13.89□□□□□ -0.19
CLN5-203ENST00000616833 PRYO14603 147 aa13.89□□□□□ -0.19
CLN5-203ENST00000616833 H3BQ85 93 aa13.87□□□□□ -0.19
CLN5-203ENST00000616833 PRLHP81277 87 aa13.87□□□□□ -0.19
CLN5-203ENST00000616833 SPRR1AP35321 89 aa13.86□□□□□ -0.19
CLN5-203ENST00000616833 GHRHP01286 108 aa13.86□□□□□ -0.19
CLN5-203ENST00000616833 REG3GQ6UW15 175 aa13.86□□□□□ -0.19
CLN5-203ENST00000616833 A0A0G2JQZ4 141 aa13.85□□□□□ -0.19
CLN5-203ENST00000616833 C9orf153Q5TBE3 101 aa13.85□□□□□ -0.19
CLN5-203ENST00000616833 KRTAP11-1Q8IUC1 163 aa13.84□□□□□ -0.19
CLN5-203ENST00000616833 ATOX1O00244 68 aa13.84□□□□□ -0.19
CLN5-203ENST00000616833 PDE6GP18545 87 aa13.84□□□□□ -0.19
CLN5-203ENST00000616833 DHRS4-AS1Q9P1J3 65 aa13.84□□□□□ -0.19
CLN5-203ENST00000616833 C16orf90A8MZG2 172 aa13.83□□□□□ -0.2
CLN5-203ENST00000616833 PHF5AQ7RTV0 110 aaKnown RBP13.83□□□□□ -0.2
CLN5-203ENST00000616833 NBDYA0A0U1RRE5 68 aa13.82□□□□□ -0.2
CLN5-203ENST00000616833 Q8N9L7 120 aa13.82□□□□□ -0.2
CLN5-203ENST00000616833 CNBPP62633 177 aaKnown RBP13.82□□□□□ -0.2
CLN5-203ENST00000616833 ATP5EP2Q5VTU8 51 aa13.81□□□□□ -0.2
CLN5-203ENST00000616833 CYSTM1Q9H1C7 97 aa13.81□□□□□ -0.2
CLN5-203ENST00000616833 COX7CP15954 63 aa13.8□□□□□ -0.2
CLN5-203ENST00000616833 PANO1I0J062 215 aa13.79□□□□□ -0.2
CLN5-203ENST00000616833 UQCRQO14949 82 aa13.79□□□□□ -0.2
CLN5-203ENST00000616833 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
CLN5-203ENST00000616833 KMT2AQ03164 3969 aa13.78□□□□□ -0.2
CLN5-203ENST00000616833 LRCOL1A6NCL2 159 aa13.78□□□□□ -0.2
CLN5-203ENST00000616833 NUPR2A6NF83 97 aa13.78□□□□□ -0.2
CLN5-203ENST00000616833 DPH3Q96FX2 82 aa13.75□□□□□ -0.21
CLN5-203ENST00000616833 TGP01266 2768 aa13.74□□□□□ -0.21
CLN5-203ENST00000616833 C1orf137Q5JT78 98 aa13.73□□□□□ -0.21
CLN5-203ENST00000616833 A0A1W2PNM2 257 aa13.72□□□□□ -0.21
CLN5-203ENST00000616833 IGLV5-48A0A075B6I7 105 aa13.72□□□□□ -0.21
CLN5-203ENST00000616833 Q6ZRN7 208 aaPredicted RBP13.72□□□□□ -0.21
CLN5-203ENST00000616833 VPS13DQ5THJ4 4388 aa13.72□□□□□ -0.21
CLN5-203ENST00000616833 NREPQ16612 68 aa13.71□□□□□ -0.21
CLN5-203ENST00000616833 SERP2Q8N6R1 65 aa13.71□□□□□ -0.21
CLN5-203ENST00000616833 C14orf177Q52M58 125 aa13.7□□□□□ -0.22
CLN5-203ENST00000616833 BPY2O14599 106 aa13.69□□□□□ -0.22
CLN5-203ENST00000616833 C9orf163Q8N9P6 203 aa13.69□□□□□ -0.22
CLN5-203ENST00000616833 TNP2Q05952 138 aa13.68□□□□□ -0.22
CLN5-203ENST00000616833 SMIM29Q86T20 159 aa13.68□□□□□ -0.22
CLN5-203ENST00000616833 CXCL6P80162 114 aa13.67□□□□□ -0.22
CLN5-203ENST00000616833 DNAH2Q9P225 4427 aa13.66□□□□□ -0.22
CLN5-203ENST00000616833 EPM2AB3EWF7 344 aa13.63□□□□□ -0.23
CLN5-203ENST00000616833 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
CLN5-203ENST00000616833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.63□□□□□ -0.23
CLN5-203ENST00000616833 CRYGAP11844 174 aa13.61□□□□□ -0.23
CLN5-203ENST00000616833 Q8NBF4 154 aa13.59□□□□□ -0.23
CLN5-203ENST00000616833 DEFB116Q30KQ4 102 aa13.59□□□□□ -0.23
CLN5-203ENST00000616833 C20orf197Q8N268 126 aa13.59□□□□□ -0.23
CLN5-203ENST00000616833 F8WEM9 126 aa13.58□□□□□ -0.24
CLN5-203ENST00000616833 IGKV4-1P06312 121 aa13.58□□□□□ -0.24
CLN5-203ENST00000616833 HECTD4Q9Y4D8 3996 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms