RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LINC00158P58513 81 aa3.36□□□□□ -1.87
MUC1-227ENST00000615517 Q75L30 129 aa3.36□□□□□ -1.87
MUC1-227ENST00000615517 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
MUC1-227ENST00000615517 CST9LQ9H4G1 147 aa3.36□□□□□ -1.87
MUC1-227ENST00000615517 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 S100A8P05109 93 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 CD164Q04900 197 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 Q1RN00 199 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 ALKAL2Q6UX46 152 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 ERASQ7Z444 233 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 SCGB3A1Q96QR1 104 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 LAMTOR2Q9Y2Q5 125 aa3.35□□□□□ -1.87
MUC1-227ENST00000615517 TRBV20-1A0A075B6N2 111 aa3.34□□□□□ -1.87
MUC1-227ENST00000615517 H3BRM9 83 aa3.34□□□□□ -1.87
MUC1-227ENST00000615517 K7EMI3 77 aa3.34□□□□□ -1.87
MUC1-227ENST00000615517 ZNF22P17026 224 aaPredicted RBP3.34□□□□□ -1.87
MUC1-227ENST00000615517 SPRR1BP22528 89 aa3.34□□□□□ -1.87
MUC1-227ENST00000615517 PMVKQ15126 192 aa3.34□□□□□ -1.87
MUC1-227ENST00000615517 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
MUC1-227ENST00000615517 SRP19P09132 144 aaKnown RBP3.33□□□□□ -1.88
MUC1-227ENST00000615517 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
MUC1-227ENST00000615517 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 DDTP30046 118 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 ADIRFQ15847 76 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 C10orf91Q5T1B1 145 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 OBSCN-AS1Q96MR7 158 aa3.32□□□□□ -1.88
MUC1-227ENST00000615517 NXT2Q9NPJ8 142 aaKnown RBP3.32□□□□□ -1.88
MUC1-227ENST00000615517 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
MUC1-227ENST00000615517 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
MUC1-227ENST00000615517 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
MUC1-227ENST00000615517 G0S2P27469 103 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 S100A12P80511 92 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 JOSD1Q15040 202 aaPredicted RBP3.3□□□□□ -1.88
MUC1-227ENST00000615517 C6orf99Q4VX62 202 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 ATP5L2Q7Z4Y8 100 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 PRO1933Q9H354 126 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 LAMTOR3Q9UHA4 124 aa3.3□□□□□ -1.88
MUC1-227ENST00000615517 SLC25A34Q6PIV7 304 aa3.29□□□□□ -1.88
MUC1-227ENST00000615517 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
MUC1-227ENST00000615517 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
MUC1-227ENST00000615517 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
MUC1-227ENST00000615517 SLC51BQ86UW2 128 aa3.28□□□□□ -1.88
MUC1-227ENST00000615517 NAT8Q9UHE5 227 aa3.28□□□□□ -1.88
MUC1-227ENST00000615517 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
MUC1-227ENST00000615517 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 A6NN06 94 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 C9JQL5 133 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 ATP6V1G1O75348 118 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 HRES1P13985 223 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 AKR1D1P51857 326 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
MUC1-227ENST00000615517 LINC01546A6NGU7 62 aa3.26□□□□□ -1.89
MUC1-227ENST00000615517 ZNF73O43830 326 aaPredicted RBP3.26□□□□□ -1.89
MUC1-227ENST00000615517 MEIG1Q5JSS6 88 aa3.26□□□□□ -1.89
MUC1-227ENST00000615517 Q96NJ1 140 aa3.26□□□□□ -1.89
MUC1-227ENST00000615517 A8MUU9 505 aa3.25□□□□□ -1.89
MUC1-227ENST00000615517 NDUFA6P56556 154 aa3.25□□□□□ -1.89
MUC1-227ENST00000615517 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
MUC1-227ENST00000615517 LINC01549A6NIU2 74 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 TCL1BO95988 128 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 Q6ZVH6 145 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 FA2HQ7L5A8 372 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 DEFB105AQ8NG35 78 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 SPANXB1Q9NS25 103 aaPredicted RBP3.24□□□□□ -1.89
MUC1-227ENST00000615517 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
MUC1-227ENST00000615517 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
MUC1-227ENST00000615517 SPRR2EP22531 72 aa3.23□□□□□ -1.89
MUC1-227ENST00000615517 SPRR2BP35325 72 aa3.23□□□□□ -1.89
MUC1-227ENST00000615517 SPRR2AP35326 72 aa3.23□□□□□ -1.89
MUC1-227ENST00000615517 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
MUC1-227ENST00000615517 A0A096LNJ9 63 aa3.22□□□□□ -1.89
MUC1-227ENST00000615517 A8MWP4 228 aa3.22□□□□□ -1.89
MUC1-227ENST00000615517 TAL2Q16559 108 aa3.22□□□□□ -1.89
MUC1-227ENST00000615517 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
MUC1-227ENST00000615517 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
MUC1-227ENST00000615517 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
MUC1-227ENST00000615517 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
MUC1-227ENST00000615517 NDUFC2O95298 119 aa3.2□□□□□ -1.9
MUC1-227ENST00000615517 HERV-K104P63124 156 aa3.2□□□□□ -1.9
MUC1-227ENST00000615517 MT1BP07438 61 aa3.19□□□□□ -1.9
MUC1-227ENST00000615517 HINT1P49773 126 aaPredicted RBP3.19□□□□□ -1.9
MUC1-227ENST00000615517 RGS21Q2M5E4 152 aa3.19□□□□□ -1.9
MUC1-227ENST00000615517 SOSTDC1Q6X4U4 206 aa3.19□□□□□ -1.9
MUC1-227ENST00000615517 BAGE3Q86Y29 109 aa3.19□□□□□ -1.9
MUC1-227ENST00000615517 MAP1LC3CQ9BXW4 147 aa3.19□□□□□ -1.9
MUC1-227ENST00000615517 LINC00587B1AMM8 73 aa3.18□□□□□ -1.9
MUC1-227ENST00000615517 HBDP02042 147 aa3.18□□□□□ -1.9
MUC1-227ENST00000615517 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
MUC1-227ENST00000615517 URB1-AS1Q96HZ7 61 aa3.18□□□□□ -1.9
MUC1-227ENST00000615517 IGLV5-48A0A075B6I7 105 aa3.17□□□□□ -1.9
MUC1-227ENST00000615517 MYMXA0A1B0GTQ4 84 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms