RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
SMN2-213ENST00000614240 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
SMN2-213ENST00000614240 NPC2P61916 151 aa9.84□□□□□ -0.83
SMN2-213ENST00000614240 YPEL4Q96NS1 127 aa9.84□□□□□ -0.83
SMN2-213ENST00000614240 DPM2O94777 84 aa9.83□□□□□ -0.84
SMN2-213ENST00000614240 PMCHL2Q9BQD1 86 aa9.82□□□□□ -0.84
SMN2-213ENST00000614240 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
SMN2-213ENST00000614240 FABP4P15090 132 aa9.81□□□□□ -0.84
SMN2-213ENST00000614240 HRCT1Q6UXD1 115 aa9.81□□□□□ -0.84
SMN2-213ENST00000614240 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
SMN2-213ENST00000614240 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
SMN2-213ENST00000614240 SERF1AO75920 110 aa9.8□□□□□ -0.84
SMN2-213ENST00000614240 IGKCP01834 107 aa9.8□□□□□ -0.84
SMN2-213ENST00000614240 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
SMN2-213ENST00000614240 SLC25A34Q6PIV7 304 aa9.79□□□□□ -0.84
SMN2-213ENST00000614240 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
SMN2-213ENST00000614240 CRCT1Q9UGL9 99 aa9.79□□□□□ -0.84
SMN2-213ENST00000614240 TRGC2P03986 189 aa9.78□□□□□ -0.84
SMN2-213ENST00000614240 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
SMN2-213ENST00000614240 ADAMTSL4-AS1Q5T5F5 129 aa9.78□□□□□ -0.84
SMN2-213ENST00000614240 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
SMN2-213ENST00000614240 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
SMN2-213ENST00000614240 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
SMN2-213ENST00000614240 LCE2CQ5TA81 110 aa9.77□□□□□ -0.85
SMN2-213ENST00000614240 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
SMN2-213ENST00000614240 C9orf92A6NGG3 77 aa9.76□□□□□ -0.85
SMN2-213ENST00000614240 LAMTOR3Q9UHA4 124 aa9.76□□□□□ -0.85
SMN2-213ENST00000614240 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
SMN2-213ENST00000614240 LINC00310P59036 64 aa9.74□□□□□ -0.85
SMN2-213ENST00000614240 SPRR1BP22528 89 aa9.73□□□□□ -0.85
SMN2-213ENST00000614240 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
SMN2-213ENST00000614240 FSIP2Q5CZC0 6907 aa9.72□□□□□ -0.85
SMN2-213ENST00000614240 E9PLD3 99 aa9.71□□□□□ -0.86
SMN2-213ENST00000614240 CFC1BP0CG36 223 aa9.71□□□□□ -0.86
SMN2-213ENST00000614240 MT1HP80294 61 aa9.7□□□□□ -0.86
SMN2-213ENST00000614240 TAL2Q16559 108 aa9.7□□□□□ -0.86
SMN2-213ENST00000614240 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
SMN2-213ENST00000614240 KRTAP19-2Q3LHN2 52 aa9.69□□□□□ -0.86
SMN2-213ENST00000614240 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
SMN2-213ENST00000614240 COX7BP24311 80 aa9.68□□□□□ -0.86
SMN2-213ENST00000614240 Q1RN00 199 aa9.68□□□□□ -0.86
SMN2-213ENST00000614240 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
SMN2-213ENST00000614240 PRO1933Q9H354 126 aa9.67□□□□□ -0.86
SMN2-213ENST00000614240 H7C2G1 150 aa9.65□□□□□ -0.86
SMN2-213ENST00000614240 TIMM17BO60830 172 aa9.65□□□□□ -0.86
SMN2-213ENST00000614240 CD164Q04900 197 aa9.65□□□□□ -0.86
SMN2-213ENST00000614240 LITAFQ99732 161 aa9.65□□□□□ -0.86
SMN2-213ENST00000614240 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
SMN2-213ENST00000614240 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
SMN2-213ENST00000614240 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
SMN2-213ENST00000614240 TEX49A0A1B0GTD5 131 aa9.63□□□□□ -0.87
SMN2-213ENST00000614240 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
SMN2-213ENST00000614240 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
SMN2-213ENST00000614240 M0R2T5 61 aa9.61□□□□□ -0.87
SMN2-213ENST00000614240 AKR1D1P51857 326 aa9.61□□□□□ -0.87
SMN2-213ENST00000614240 C1orf195Q5TG92 126 aa9.58□□□□□ -0.88
SMN2-213ENST00000614240 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
SMN2-213ENST00000614240 Q5XG85 94 aa9.57□□□□□ -0.88
SMN2-213ENST00000614240 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
SMN2-213ENST00000614240 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
SMN2-213ENST00000614240 A0A0G2JQZ4 141 aa9.55□□□□□ -0.88
SMN2-213ENST00000614240 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
SMN2-213ENST00000614240 COLCA2A8K830 154 aa9.55□□□□□ -0.88
SMN2-213ENST00000614240 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
SMN2-213ENST00000614240 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
SMN2-213ENST00000614240 A0A1B0GWB2 263 aa9.54□□□□□ -0.88
SMN2-213ENST00000614240 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
SMN2-213ENST00000614240 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
SMN2-213ENST00000614240 A6NDN8 102 aa9.53□□□□□ -0.88
SMN2-213ENST00000614240 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
SMN2-213ENST00000614240 SCGB1D4Q6XE38 83 aa9.53□□□□□ -0.88
SMN2-213ENST00000614240 COPS9Q8WXC6 57 aa9.53□□□□□ -0.88
SMN2-213ENST00000614240 IGLV5-48A0A075B6I7 105 aa9.5□□□□□ -0.89
SMN2-213ENST00000614240 TCL1BO95988 128 aa9.5□□□□□ -0.89
SMN2-213ENST00000614240 NHP2Q9NX24 153 aaKnown RBP9.48□□□□□ -0.89
SMN2-213ENST00000614240 A4D1N5 150 aa9.47□□□□□ -0.89
SMN2-213ENST00000614240 IFITM1P13164 125 aa9.47□□□□□ -0.89
SMN2-213ENST00000614240 F8WEM9 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
SMN2-213ENST00000614240 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
SMN2-213ENST00000614240 KRTDAPP60985 99 aa9.44□□□□□ -0.9
SMN2-213ENST00000614240 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
SMN2-213ENST00000614240 SLC7A5P1Q8MH63 180 aa9.44□□□□□ -0.9
SMN2-213ENST00000614240 Q6ZVH6 145 aa9.43□□□□□ -0.9
SMN2-213ENST00000614240 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
SMN2-213ENST00000614240 C20orf202A1L168 122 aa9.41□□□□□ -0.9
SMN2-213ENST00000614240 Q6Q795 121 aa9.41□□□□□ -0.9
SMN2-213ENST00000614240 PCP2Q8IVA1 136 aa9.41□□□□□ -0.9
SMN2-213ENST00000614240 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
SMN2-213ENST00000614240 VAMP3Q15836 100 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms