RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
GGA3-221ENST00000614198 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
GGA3-221ENST00000614198 C6orf99Q4VX62 202 aa6.72□□□□□ -1.33
GGA3-221ENST00000614198 TRAV10A0A0B4J240 114 aa6.72□□□□□ -1.33
GGA3-221ENST00000614198 KMT2AQ03164 3969 aa6.71□□□□□ -1.33
GGA3-221ENST00000614198 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
GGA3-221ENST00000614198 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
GGA3-221ENST00000614198 LINC01547P58512 204 aaPredicted RBP6.7□□□□□ -1.34
GGA3-221ENST00000614198 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
GGA3-221ENST00000614198 C9orf116Q5BN46 136 aaPredicted RBP6.7□□□□□ -1.34
GGA3-221ENST00000614198 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
GGA3-221ENST00000614198 ESRGQ1W209 222 aa6.7□□□□□ -1.34
GGA3-221ENST00000614198 Q6ZQT0 140 aa6.7□□□□□ -1.34
GGA3-221ENST00000614198 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
GGA3-221ENST00000614198 IGHV3OR16-9A0A0B4J2B5 98 aa6.68□□□□□ -1.34
GGA3-221ENST00000614198 ANGP03950 147 aaKnown RBP6.68□□□□□ -1.34
GGA3-221ENST00000614198 CXCL6P80162 114 aa6.67□□□□□ -1.34
GGA3-221ENST00000614198 Q6ZVQ6 151 aa6.67□□□□□ -1.34
GGA3-221ENST00000614198 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
GGA3-221ENST00000614198 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
GGA3-221ENST00000614198 KLK12Q9UKR0 248 aa6.67□□□□□ -1.34
GGA3-221ENST00000614198 Q6ZQY7 126 aa6.66□□□□□ -1.34
GGA3-221ENST00000614198 M0R2N4 97 aa6.65□□□□□ -1.34
GGA3-221ENST00000614198 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.35
GGA3-221ENST00000614198 C6orf223Q8N319 242 aa6.65□□□□□ -1.35
GGA3-221ENST00000614198 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
GGA3-221ENST00000614198 PSPHP1O15172 72 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 REG3AQ06141 175 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 B9D2Q9BPU9 175 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 PDE6GP18545 87 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 LINC00575Q6W349 94 aa6.63□□□□□ -1.35
GGA3-221ENST00000614198 LELP1Q5T871 98 aa6.62□□□□□ -1.35
GGA3-221ENST00000614198 Q8N9L7 120 aa6.62□□□□□ -1.35
GGA3-221ENST00000614198 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
GGA3-221ENST00000614198 NREPQ16612 68 aa6.62□□□□□ -1.35
GGA3-221ENST00000614198 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
GGA3-221ENST00000614198 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
GGA3-221ENST00000614198 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
GGA3-221ENST00000614198 A0A1B0GUV1 79 aa6.6□□□□□ -1.35
GGA3-221ENST00000614198 Q8IZM0 81 aa6.6□□□□□ -1.35
GGA3-221ENST00000614198 BPY2O14599 106 aa6.59□□□□□ -1.36
GGA3-221ENST00000614198 UNQ6190/PRO20217Q6UXQ8 127 aa6.59□□□□□ -1.36
GGA3-221ENST00000614198 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
GGA3-221ENST00000614198 H3BQ85 93 aa6.58□□□□□ -1.36
GGA3-221ENST00000614198 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
GGA3-221ENST00000614198 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
GGA3-221ENST00000614198 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
GGA3-221ENST00000614198 MUC7Q8TAX7 377 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 HYDINQ4G0P3 5121 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 PRYO14603 147 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 COX17Q14061 63 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 PRR4Q16378 134 aa6.57□□□□□ -1.36
GGA3-221ENST00000614198 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
GGA3-221ENST00000614198 DEFB105AQ8NG35 78 aa6.56□□□□□ -1.36
GGA3-221ENST00000614198 KRTAP1-5Q9BYS1 174 aa6.56□□□□□ -1.36
GGA3-221ENST00000614198 C3orf84H3BNL1 204 aa6.56□□□□□ -1.36
GGA3-221ENST00000614198 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
GGA3-221ENST00000614198 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
GGA3-221ENST00000614198 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
GGA3-221ENST00000614198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.55□□□□□ -1.36
GGA3-221ENST00000614198 H3BNG1 76 aa6.55□□□□□ -1.36
GGA3-221ENST00000614198 Q8NDZ9 215 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 A8MU10 97 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 OCR1Q9BZK8 76 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 PRR34Q9NV39 138 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 IGKV2D-24A0A075B6R9 120 aa6.54□□□□□ -1.36
GGA3-221ENST00000614198 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
GGA3-221ENST00000614198 Q6ZRU5 148 aa6.53□□□□□ -1.36
GGA3-221ENST00000614198 KIAA0087Q14695 138 aa6.53□□□□□ -1.36
GGA3-221ENST00000614198 COX7BP24311 80 aa6.52□□□□□ -1.37
GGA3-221ENST00000614198 CD164Q04900 197 aa6.52□□□□□ -1.37
GGA3-221ENST00000614198 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
GGA3-221ENST00000614198 APLNQ9ULZ1 77 aa6.52□□□□□ -1.37
GGA3-221ENST00000614198 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
GGA3-221ENST00000614198 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 Q1T7F1 81 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 hDV103S1A0JD37 113 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 LINC01556Q5JQF7 62 aa6.5□□□□□ -1.37
GGA3-221ENST00000614198 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
GGA3-221ENST00000614198 UBE2DNLQ8IWF7 75 aa6.49□□□□□ -1.37
GGA3-221ENST00000614198 DNAH10OSP0CZ25 163 aa6.48□□□□□ -1.37
GGA3-221ENST00000614198 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
GGA3-221ENST00000614198 C15orf56Q8N910 161 aa6.48□□□□□ -1.37
GGA3-221ENST00000614198 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
GGA3-221ENST00000614198 Q6ZRP5 223 aa6.47□□□□□ -1.37
GGA3-221ENST00000614198 RBM12B-AS1Q9P1G2 102 aa6.47□□□□□ -1.37
GGA3-221ENST00000614198 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.37
GGA3-221ENST00000614198 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.37
GGA3-221ENST00000614198 CAMK2N2Q96S95 79 aa6.46□□□□□ -1.37
GGA3-221ENST00000614198 A8MUN3 132 aa6.46□□□□□ -1.38
GGA3-221ENST00000614198 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.38
GGA3-221ENST00000614198 LCE6AA0A183 80 aa6.45□□□□□ -1.38
GGA3-221ENST00000614198 C1orf64Q8NEQ6 169 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms