RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 Q6ZTC4 211 aa11.19□□□□□ -0.62
EWSR1-221ENST00000610553 RETNQ9HD89 108 aa11.19□□□□□ -0.62
EWSR1-221ENST00000610553 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
EWSR1-221ENST00000610553 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
EWSR1-221ENST00000610553 RMI2Q96E14 147 aa11.19□□□□□ -0.62
EWSR1-221ENST00000610553 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
EWSR1-221ENST00000610553 ESRGQ1W209 222 aa11.18□□□□□ -0.62
EWSR1-221ENST00000610553 C4orf26Q17RF5 130 aa11.17□□□□□ -0.62
EWSR1-221ENST00000610553 F8WDY8 70 aa11.17□□□□□ -0.62
EWSR1-221ENST00000610553 SERP1Q9Y6X1 66 aa11.17□□□□□ -0.62
EWSR1-221ENST00000610553 KCNQ1DNQ9H478 68 aa11.16□□□□□ -0.62
EWSR1-221ENST00000610553 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
EWSR1-221ENST00000610553 F8WEM9 126 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 NREPQ16612 68 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 BPY2O14599 106 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
EWSR1-221ENST00000610553 Q8N9L7 120 aa11.13□□□□□ -0.63
EWSR1-221ENST00000610553 SERTAD4-AS1Q5TG53 156 aa11.13□□□□□ -0.63
EWSR1-221ENST00000610553 NDUFC1O43677 76 aa11.12□□□□□ -0.63
EWSR1-221ENST00000610553 NOTCH1P46531 2555 aa11.12□□□□□ -0.63
EWSR1-221ENST00000610553 Q8N377 158 aa11.12□□□□□ -0.63
EWSR1-221ENST00000610553 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
EWSR1-221ENST00000610553 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
EWSR1-221ENST00000610553 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
EWSR1-221ENST00000610553 IGLV5-48A0A075B6I7 105 aa11.1□□□□□ -0.63
EWSR1-221ENST00000610553 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
EWSR1-221ENST00000610553 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
EWSR1-221ENST00000610553 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
EWSR1-221ENST00000610553 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
EWSR1-221ENST00000610553 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
EWSR1-221ENST00000610553 OXLD1Q5BKU9 147 aa11.08□□□□□ -0.64
EWSR1-221ENST00000610553 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
EWSR1-221ENST00000610553 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
EWSR1-221ENST00000610553 TLX1NBP0CAT3 122 aa11.07□□□□□ -0.64
EWSR1-221ENST00000610553 Q6ZRX8 168 aa11.06□□□□□ -0.64
EWSR1-221ENST00000610553 KRTAP4-16G5E9R7 235 aaPredicted RBP11.06□□□□□ -0.64
EWSR1-221ENST00000610553 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
EWSR1-221ENST00000610553 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
EWSR1-221ENST00000610553 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
EWSR1-221ENST00000610553 DNAH10OSP0CZ25 163 aa11.04□□□□□ -0.64
EWSR1-221ENST00000610553 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
EWSR1-221ENST00000610553 DHRS4-AS1Q9P1J3 65 aa11.04□□□□□ -0.64
EWSR1-221ENST00000610553 Q9BRP9 147 aa11.04□□□□□ -0.64
EWSR1-221ENST00000610553 TNP2Q05952 138 aa11.03□□□□□ -0.64
EWSR1-221ENST00000610553 A0A1B0GW54 56 aa11.02□□□□□ -0.64
EWSR1-221ENST00000610553 SPRR1AP35321 89 aa11.02□□□□□ -0.64
EWSR1-221ENST00000610553 IGLV5-37A0A075B6J1 123 aa11.02□□□□□ -0.65
EWSR1-221ENST00000610553 PRYO14603 147 aa11.02□□□□□ -0.65
EWSR1-221ENST00000610553 IGLV1-50A0A075B6I6 118 aa11.01□□□□□ -0.65
EWSR1-221ENST00000610553 RPL37AP8A6NKH3 93 aa11.01□□□□□ -0.65
EWSR1-221ENST00000610553 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
EWSR1-221ENST00000610553 A0A1W2PNM2 257 aa11.01□□□□□ -0.65
EWSR1-221ENST00000610553 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
EWSR1-221ENST00000610553 DNAH3Q8TD57 4116 aa11□□□□□ -0.65
EWSR1-221ENST00000610553 A0A0U1RQV1 116 aa11□□□□□ -0.65
EWSR1-221ENST00000610553 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
EWSR1-221ENST00000610553 FP248Q71RG6 208 aaPredicted RBP11□□□□□ -0.65
EWSR1-221ENST00000610553 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
EWSR1-221ENST00000610553 SMIM26A0A096LP01 95 aa10.99□□□□□ -0.65
EWSR1-221ENST00000610553 KRTAP7-1Q8IUC3 87 aa10.98□□□□□ -0.65
EWSR1-221ENST00000610553 MRAPQ8TCY5 172 aa10.98□□□□□ -0.65
EWSR1-221ENST00000610553 ETDCA0A1B0GVM5 59 aa10.97□□□□□ -0.65
EWSR1-221ENST00000610553 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
EWSR1-221ENST00000610553 ST20-AS1Q8NBB2 130 aa10.97□□□□□ -0.65
EWSR1-221ENST00000610553 Q8NBF4 154 aa10.97□□□□□ -0.65
EWSR1-221ENST00000610553 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.65
EWSR1-221ENST00000610553 CASC10Q5T4H9 136 aa10.96□□□□□ -0.66
EWSR1-221ENST00000610553 SPRR4Q96PI1 79 aa10.95□□□□□ -0.66
EWSR1-221ENST00000610553 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
EWSR1-221ENST00000610553 LINC00588Q9Y4M8 146 aa10.92□□□□□ -0.66
EWSR1-221ENST00000610553 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
EWSR1-221ENST00000610553 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
EWSR1-221ENST00000610553 LINC00474Q9P2X8 69 aa10.91□□□□□ -0.66
EWSR1-221ENST00000610553 LCE6AA0A183 80 aa10.9□□□□□ -0.66
EWSR1-221ENST00000610553 DSCR10P59022 87 aa10.89□□□□□ -0.67
EWSR1-221ENST00000610553 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
EWSR1-221ENST00000610553 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
EWSR1-221ENST00000610553 UBE2BP63146 152 aa10.87□□□□□ -0.67
EWSR1-221ENST00000610553 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
EWSR1-221ENST00000610553 K7EQZ3 153 aa10.85□□□□□ -0.67
EWSR1-221ENST00000610553 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
EWSR1-221ENST00000610553 PRB2P02812 416 aaPredicted RBP10.84□□□□□ -0.67
EWSR1-221ENST00000610553 LINC00476Q8WZB0 136 aa10.83□□□□□ -0.68
EWSR1-221ENST00000610553 PRO0628Q9UI54 55 aa10.82□□□□□ -0.68
EWSR1-221ENST00000610553 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
EWSR1-221ENST00000610553 IGFL1Q6UW32 110 aa10.78□□□□□ -0.68
EWSR1-221ENST00000610553 HUWE1Q7Z6Z7 4374 aaKnown RBP10.78□□□□□ -0.68
EWSR1-221ENST00000610553 HCG22E2RYF7 251 aa10.77□□□□□ -0.69
EWSR1-221ENST00000610553 A0A0G2JQZ4 141 aa10.76□□□□□ -0.69
EWSR1-221ENST00000610553 A0A1W2PNN7 141 aa10.76□□□□□ -0.69
EWSR1-221ENST00000610553 PSCAO43653 123 aa10.76□□□□□ -0.69
EWSR1-221ENST00000610553 IGLV8-61A0A075B6I0 122 aa10.74□□□□□ -0.69
EWSR1-221ENST00000610553 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
EWSR1-221ENST00000610553 A0A096LNI7 61 aa10.74□□□□□ -0.69
EWSR1-221ENST00000610553 PRLHP81277 87 aa10.74□□□□□ -0.69
EWSR1-221ENST00000610553 MPLKIPQ8TAP9 179 aa10.74□□□□□ -0.69
EWSR1-221ENST00000610553 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms