RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TSPAN13O95857 204 aa11.23□□□□□ -0.61
SGMS1-208ENST00000608287 S100A2P29034 98 aa11.22□□□□□ -0.61
SGMS1-208ENST00000608287 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
SGMS1-208ENST00000608287 HIST3H2BBQ8N257 126 aa11.21□□□□□ -0.61
SGMS1-208ENST00000608287 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
SGMS1-208ENST00000608287 CDIP1Q9H305 208 aa11.21□□□□□ -0.61
SGMS1-208ENST00000608287 IGLV6-57P01721 117 aa11.2□□□□□ -0.62
SGMS1-208ENST00000608287 AKR1D1P51857 326 aa11.2□□□□□ -0.62
SGMS1-208ENST00000608287 SMCR5Q8TEV8 140 aa11.2□□□□□ -0.62
SGMS1-208ENST00000608287 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
SGMS1-208ENST00000608287 ZNF706Q9Y5V0 76 aaPredicted RBP11.2□□□□□ -0.62
SGMS1-208ENST00000608287 B5MCH6 92 aa11.19□□□□□ -0.62
SGMS1-208ENST00000608287 SCGB1D4Q6XE38 83 aa11.19□□□□□ -0.62
SGMS1-208ENST00000608287 HIST1H2BLQ99880 126 aa11.19□□□□□ -0.62
SGMS1-208ENST00000608287 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
SGMS1-208ENST00000608287 TRAV23DV6A0A075B6W5 121 aa11.18□□□□□ -0.62
SGMS1-208ENST00000608287 S100A6P06703 90 aa11.18□□□□□ -0.62
SGMS1-208ENST00000608287 FSIP2Q5CZC0 6907 aa11.17□□□□□ -0.62
SGMS1-208ENST00000608287 OR13C6PQ8NH95 151 aa11.16□□□□□ -0.62
SGMS1-208ENST00000608287 TPRXLQ17RH7 258 aa11.15□□□□□ -0.62
SGMS1-208ENST00000608287 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.62
SGMS1-208ENST00000608287 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
SGMS1-208ENST00000608287 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
SGMS1-208ENST00000608287 Q6ZRX8 168 aa11.14□□□□□ -0.63
SGMS1-208ENST00000608287 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
SGMS1-208ENST00000608287 ZNF73O43830 326 aaPredicted RBP11.13□□□□□ -0.63
SGMS1-208ENST00000608287 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
SGMS1-208ENST00000608287 SPANXDQ9BXN6 97 aa11.13□□□□□ -0.63
SGMS1-208ENST00000608287 CBY1Q9Y3M2 126 aa11.13□□□□□ -0.63
SGMS1-208ENST00000608287 ERC2-IT1O76042 136 aa11.12□□□□□ -0.63
SGMS1-208ENST00000608287 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
SGMS1-208ENST00000608287 Q9BRP9 147 aa11.12□□□□□ -0.63
SGMS1-208ENST00000608287 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
SGMS1-208ENST00000608287 HINT1P49773 126 aaPredicted RBP11.1□□□□□ -0.63
SGMS1-208ENST00000608287 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
SGMS1-208ENST00000608287 LINC00518Q8N0U6 118 aa11.1□□□□□ -0.63
SGMS1-208ENST00000608287 COPS9Q8WXC6 57 aa11.09□□□□□ -0.63
SGMS1-208ENST00000608287 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
SGMS1-208ENST00000608287 IFITM1P13164 125 aa11.07□□□□□ -0.64
SGMS1-208ENST00000608287 LINC00483Q53H64 154 aa11.07□□□□□ -0.64
SGMS1-208ENST00000608287 Q6ZVH6 145 aa11.07□□□□□ -0.64
SGMS1-208ENST00000608287 CTAG1AP78358 180 aa11.06□□□□□ -0.64
SGMS1-208ENST00000608287 MUC17Q685J3 4493 aa11.06□□□□□ -0.64
SGMS1-208ENST00000608287 MUSTN1Q8IVN3 82 aa11.05□□□□□ -0.64
SGMS1-208ENST00000608287 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
SGMS1-208ENST00000608287 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
SGMS1-208ENST00000608287 SCGB1D1O95968 90 aa11.03□□□□□ -0.64
SGMS1-208ENST00000608287 RETNLBQ9BQ08 111 aa11.03□□□□□ -0.64
SGMS1-208ENST00000608287 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
SGMS1-208ENST00000608287 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
SGMS1-208ENST00000608287 SPAG11AQ6PDA7 123 aa11.02□□□□□ -0.65
SGMS1-208ENST00000608287 Q8NBF4 154 aa11.02□□□□□ -0.65
SGMS1-208ENST00000608287 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
SGMS1-208ENST00000608287 A6NDN8 102 aa11□□□□□ -0.65
SGMS1-208ENST00000608287 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
SGMS1-208ENST00000608287 COX7BP24311 80 aa10.99□□□□□ -0.65
SGMS1-208ENST00000608287 MOBPQ13875 183 aa10.99□□□□□ -0.65
SGMS1-208ENST00000608287 DHRS4-AS1Q9P1J3 65 aa10.99□□□□□ -0.65
SGMS1-208ENST00000608287 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
SGMS1-208ENST00000608287 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
SGMS1-208ENST00000608287 TRAV13-2A0A0B4J235 113 aa10.94□□□□□ -0.66
SGMS1-208ENST00000608287 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
SGMS1-208ENST00000608287 TRBV7-6A0A0J9YX20 115 aa10.93□□□□□ -0.66
SGMS1-208ENST00000608287 SPINK1P00995 79 aa10.92□□□□□ -0.66
SGMS1-208ENST00000608287 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
SGMS1-208ENST00000608287 A4D1N5 150 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 COX8AP10176 69 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 SPRR1BP22528 89 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 ASB16-AS1Q495Z4 193 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
SGMS1-208ENST00000608287 TAL2Q16559 108 aa10.88□□□□□ -0.67
SGMS1-208ENST00000608287 FP248Q71RG6 208 aaPredicted RBP10.88□□□□□ -0.67
SGMS1-208ENST00000608287 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
SGMS1-208ENST00000608287 HIST1H4GQ99525 98 aa10.87□□□□□ -0.67
SGMS1-208ENST00000608287 SEC61BP60468 96 aaKnown RBP10.86□□□□□ -0.67
SGMS1-208ENST00000608287 LAMTOR3Q9UHA4 124 aa10.86□□□□□ -0.67
SGMS1-208ENST00000608287 PAM16Q9Y3D7 125 aa10.86□□□□□ -0.67
SGMS1-208ENST00000608287 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
SGMS1-208ENST00000608287 DLEU1O43261 78 aa10.84□□□□□ -0.67
SGMS1-208ENST00000608287 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
SGMS1-208ENST00000608287 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
SGMS1-208ENST00000608287 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
SGMS1-208ENST00000608287 C12orf57Q99622 126 aa10.83□□□□□ -0.68
SGMS1-208ENST00000608287 VAMP8Q9BV40 100 aa10.83□□□□□ -0.68
SGMS1-208ENST00000608287 VAMP3Q15836 100 aa10.82□□□□□ -0.68
SGMS1-208ENST00000608287 Q1RN00 199 aa10.82□□□□□ -0.68
SGMS1-208ENST00000608287 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
SGMS1-208ENST00000608287 Q8N377 158 aa10.8□□□□□ -0.68
SGMS1-208ENST00000608287 SLC25A20O43772 301 aa10.79□□□□□ -0.68
SGMS1-208ENST00000608287 CFC1BP0CG36 223 aa10.79□□□□□ -0.68
SGMS1-208ENST00000608287 IGLV5-48A0A075B6I7 105 aa10.78□□□□□ -0.68
SGMS1-208ENST00000608287 HRCT1Q6UXD1 115 aa10.77□□□□□ -0.69
SGMS1-208ENST00000608287 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
SGMS1-208ENST00000608287 LINC00575Q6W349 94 aa10.75□□□□□ -0.69
SGMS1-208ENST00000608287 SMIM29Q86T20 159 aa10.75□□□□□ -0.69
SGMS1-208ENST00000608287 KRTAP13-3Q3SY46 172 aa10.74□□□□□ -0.69
SGMS1-208ENST00000608287 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
SGMS1-208ENST00000608287 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
SGMS1-208ENST00000608287 C2orf91Q6ZV80 131 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms