RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 IGKV2D-28P01615 120 aa8.5□□□□□ -1.05
SSBP4-214ENST00000607020 LITAFQ99732 161 aa8.5□□□□□ -1.05
SSBP4-214ENST00000607020 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
SSBP4-214ENST00000607020 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
SSBP4-214ENST00000607020 M0R378 163 aa8.49□□□□□ -1.05
SSBP4-214ENST00000607020 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
SSBP4-214ENST00000607020 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
SSBP4-214ENST00000607020 NCR3O14931 201 aa8.47□□□□□ -1.05
SSBP4-214ENST00000607020 NPC2P61916 151 aa8.47□□□□□ -1.05
SSBP4-214ENST00000607020 SOSTDC1Q6X4U4 206 aa8.47□□□□□ -1.05
SSBP4-214ENST00000607020 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
SSBP4-214ENST00000607020 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
SSBP4-214ENST00000607020 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
SSBP4-214ENST00000607020 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
SSBP4-214ENST00000607020 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
SSBP4-214ENST00000607020 NDUFC2O95298 119 aa8.45□□□□□ -1.06
SSBP4-214ENST00000607020 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
SSBP4-214ENST00000607020 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
SSBP4-214ENST00000607020 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
SSBP4-214ENST00000607020 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
SSBP4-214ENST00000607020 PRLHP81277 87 aa8.44□□□□□ -1.06
SSBP4-214ENST00000607020 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
SSBP4-214ENST00000607020 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
SSBP4-214ENST00000607020 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
SSBP4-214ENST00000607020 TRBV10-3A0A0K0K1G6 114 aa8.42□□□□□ -1.06
SSBP4-214ENST00000607020 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
SSBP4-214ENST00000607020 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
SSBP4-214ENST00000607020 PRYO14603 147 aa8.41□□□□□ -1.06
SSBP4-214ENST00000607020 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SSBP4-214ENST00000607020 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
SSBP4-214ENST00000607020 DDTP30046 118 aa8.4□□□□□ -1.06
SSBP4-214ENST00000607020 Q6ZVH6 145 aa8.4□□□□□ -1.06
SSBP4-214ENST00000607020 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
SSBP4-214ENST00000607020 IFITM1P13164 125 aa8.39□□□□□ -1.07
SSBP4-214ENST00000607020 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
SSBP4-214ENST00000607020 SPINK1P00995 79 aa8.38□□□□□ -1.07
SSBP4-214ENST00000607020 SPRR1AP35321 89 aa8.38□□□□□ -1.07
SSBP4-214ENST00000607020 S100A12P80511 92 aa8.38□□□□□ -1.07
SSBP4-214ENST00000607020 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
SSBP4-214ENST00000607020 COX8AP10176 69 aa8.37□□□□□ -1.07
SSBP4-214ENST00000607020 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
SSBP4-214ENST00000607020 VAMP8Q9BV40 100 aa8.37□□□□□ -1.07
SSBP4-214ENST00000607020 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
SSBP4-214ENST00000607020 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
SSBP4-214ENST00000607020 SPATA45Q537H7 98 aa8.36□□□□□ -1.07
SSBP4-214ENST00000607020 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
SSBP4-214ENST00000607020 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
SSBP4-214ENST00000607020 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
SSBP4-214ENST00000607020 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
SSBP4-214ENST00000607020 XP32Q5T750 250 aa8.35□□□□□ -1.07
SSBP4-214ENST00000607020 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
SSBP4-214ENST00000607020 TRAV23DV6A0A075B6W5 121 aa8.34□□□□□ -1.07
SSBP4-214ENST00000607020 ETDCA0A1B0GVM5 59 aa8.34□□□□□ -1.07
SSBP4-214ENST00000607020 DLEU1O43261 78 aa8.34□□□□□ -1.07
SSBP4-214ENST00000607020 Q8NBF4 154 aa8.34□□□□□ -1.07
SSBP4-214ENST00000607020 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
SSBP4-214ENST00000607020 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
SSBP4-214ENST00000607020 MT1HP80294 61 aa8.33□□□□□ -1.08
SSBP4-214ENST00000607020 OR13C6PQ8NH95 151 aa8.33□□□□□ -1.08
SSBP4-214ENST00000607020 C14orf144Q96I85 54 aa8.33□□□□□ -1.08
SSBP4-214ENST00000607020 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
SSBP4-214ENST00000607020 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
SSBP4-214ENST00000607020 B5MCH6 92 aa8.31□□□□□ -1.08
SSBP4-214ENST00000607020 ZNF73O43830 326 aaPredicted RBP8.31□□□□□ -1.08
SSBP4-214ENST00000607020 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
SSBP4-214ENST00000607020 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
SSBP4-214ENST00000607020 Q6ZRX8 168 aa8.29□□□□□ -1.08
SSBP4-214ENST00000607020 Q8N377 158 aa8.28□□□□□ -1.08
SSBP4-214ENST00000607020 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SSBP4-214ENST00000607020 HIST1H4GQ99525 98 aa8.28□□□□□ -1.08
SSBP4-214ENST00000607020 TRAV13-2A0A0B4J235 113 aa8.27□□□□□ -1.09
SSBP4-214ENST00000607020 A6NDN8 102 aa8.27□□□□□ -1.09
SSBP4-214ENST00000607020 HIGD1BQ9P298 99 aa8.27□□□□□ -1.09
SSBP4-214ENST00000607020 A4D1N5 150 aa8.26□□□□□ -1.09
SSBP4-214ENST00000607020 SLC25A20O43772 301 aa8.26□□□□□ -1.09
SSBP4-214ENST00000607020 HINT1P49773 126 aaPredicted RBP8.26□□□□□ -1.09
SSBP4-214ENST00000607020 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
SSBP4-214ENST00000607020 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
SSBP4-214ENST00000607020 Q9BRP9 147 aa8.26□□□□□ -1.09
SSBP4-214ENST00000607020 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
SSBP4-214ENST00000607020 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
SSBP4-214ENST00000607020 C6orf99Q4VX62 202 aa8.24□□□□□ -1.09
SSBP4-214ENST00000607020 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
SSBP4-214ENST00000607020 ELOF1P60002 83 aaKnown RBP8.22□□□□□ -1.09
SSBP4-214ENST00000607020 TRBV7-6A0A0J9YX20 115 aa8.21□□□□□ -1.1
SSBP4-214ENST00000607020 COX7BP24311 80 aa8.21□□□□□ -1.1
SSBP4-214ENST00000607020 C12orf57Q99622 126 aa8.21□□□□□ -1.1
SSBP4-214ENST00000607020 TAL2Q16559 108 aa8.2□□□□□ -1.1
SSBP4-214ENST00000607020 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
SSBP4-214ENST00000607020 DHRS4-AS1Q9P1J3 65 aa8.2□□□□□ -1.1
SSBP4-214ENST00000607020 A0A1B0GWB2 263 aa8.18□□□□□ -1.1
SSBP4-214ENST00000607020 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SSBP4-214ENST00000607020 CEND1Q8N111 149 aa8.18□□□□□ -1.1
SSBP4-214ENST00000607020 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
SSBP4-214ENST00000607020 MOBPQ13875 183 aa8.17□□□□□ -1.1
SSBP4-214ENST00000607020 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
SSBP4-214ENST00000607020 IGLV8-61A0A075B6I0 122 aa8.16□□□□□ -1.1
SSBP4-214ENST00000607020 CFC1P0CG37 223 aa8.16□□□□□ -1.1
SSBP4-214ENST00000607020 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
SSBP4-214ENST00000607020 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms