RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 JMJD7-PLA2G4BH0Y9G9 81 aa9.72□□□□□ -0.85
CCDC12-211ENST00000604367 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
CCDC12-211ENST00000604367 LAMTOR3Q9UHA4 124 aa9.71□□□□□ -0.85
CCDC12-211ENST00000604367 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.86
CCDC12-211ENST00000604367 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
CCDC12-211ENST00000604367 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
CCDC12-211ENST00000604367 V9GYY9 64 aa9.7□□□□□ -0.86
CCDC12-211ENST00000604367 KCNQ1DNQ9H478 68 aa9.7□□□□□ -0.86
CCDC12-211ENST00000604367 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
CCDC12-211ENST00000604367 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
CCDC12-211ENST00000604367 IGKV2-24A0A0C4DH68 120 aa9.68□□□□□ -0.86
CCDC12-211ENST00000604367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
CCDC12-211ENST00000604367 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
CCDC12-211ENST00000604367 M0R2N4 97 aa9.66□□□□□ -0.86
CCDC12-211ENST00000604367 CCKP06307 115 aa9.66□□□□□ -0.86
CCDC12-211ENST00000604367 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
CCDC12-211ENST00000604367 A0A096LNI7 61 aa9.66□□□□□ -0.86
CCDC12-211ENST00000604367 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
CCDC12-211ENST00000604367 LINC00643Q86TS7 51 aa9.66□□□□□ -0.86
CCDC12-211ENST00000604367 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
CCDC12-211ENST00000604367 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
CCDC12-211ENST00000604367 CNBPP62633 177 aaKnown RBP9.65□□□□□ -0.86
CCDC12-211ENST00000604367 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
CCDC12-211ENST00000604367 J3KT08 172 aa9.64□□□□□ -0.87
CCDC12-211ENST00000604367 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
CCDC12-211ENST00000604367 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
CCDC12-211ENST00000604367 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
CCDC12-211ENST00000604367 Q6Q795 121 aa9.62□□□□□ -0.87
CCDC12-211ENST00000604367 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 H3BQ85 93 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 PRYO14603 147 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 ETDCA0A1B0GVM5 59 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 GHRHP01286 108 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
CCDC12-211ENST00000604367 VPS13DQ5THJ4 4388 aa9.6□□□□□ -0.87
CCDC12-211ENST00000604367 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
CCDC12-211ENST00000604367 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
CCDC12-211ENST00000604367 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
CCDC12-211ENST00000604367 Q6ZQT0 140 aa9.6□□□□□ -0.87
CCDC12-211ENST00000604367 Q6ZRX8 168 aa9.6□□□□□ -0.87
CCDC12-211ENST00000604367 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
CCDC12-211ENST00000604367 Q9BRP9 147 aa9.59□□□□□ -0.87
CCDC12-211ENST00000604367 SPRR1AP35321 89 aa9.58□□□□□ -0.88
CCDC12-211ENST00000604367 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
CCDC12-211ENST00000604367 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
CCDC12-211ENST00000604367 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
CCDC12-211ENST00000604367 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
CCDC12-211ENST00000604367 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
CCDC12-211ENST00000604367 TGP01266 2768 aa9.56□□□□□ -0.88
CCDC12-211ENST00000604367 IMUPQ9GZP8 106 aa9.55□□□□□ -0.88
CCDC12-211ENST00000604367 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
CCDC12-211ENST00000604367 UBE2BP63146 152 aa9.55□□□□□ -0.88
CCDC12-211ENST00000604367 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
CCDC12-211ENST00000604367 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
CCDC12-211ENST00000604367 Q8N377 158 aa9.54□□□□□ -0.88
CCDC12-211ENST00000604367 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
CCDC12-211ENST00000604367 C4orf26Q17RF5 130 aa9.54□□□□□ -0.88
CCDC12-211ENST00000604367 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
CCDC12-211ENST00000604367 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
CCDC12-211ENST00000604367 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
CCDC12-211ENST00000604367 ERC2-IT1O76042 136 aa9.53□□□□□ -0.88
CCDC12-211ENST00000604367 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 Q6JHZ5 121 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
CCDC12-211ENST00000604367 PDE6GP18545 87 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 FUSP35637 526 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC12-211ENST00000604367 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 C9orf153Q5TBE3 101 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 UBL5Q9BZL1 73 aa9.52□□□□□ -0.89
CCDC12-211ENST00000604367 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
CCDC12-211ENST00000604367 PRLHP81277 87 aa9.51□□□□□ -0.89
CCDC12-211ENST00000604367 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
CCDC12-211ENST00000604367 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
CCDC12-211ENST00000604367 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
CCDC12-211ENST00000604367 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
CCDC12-211ENST00000604367 PANO1I0J062 215 aa9.49□□□□□ -0.89
CCDC12-211ENST00000604367 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
CCDC12-211ENST00000604367 A0A087WTM6 91 aa9.48□□□□□ -0.89
CCDC12-211ENST00000604367 A0A087WVE0 104 aa9.47□□□□□ -0.89
CCDC12-211ENST00000604367 HIST1H4AP62805 103 aaKnown RBP9.46□□□□□ -0.89
CCDC12-211ENST00000604367 Q6ZR54 194 aa9.46□□□□□ -0.89
CCDC12-211ENST00000604367 LY6G6CO95867 125 aa9.46□□□□□ -0.9
CCDC12-211ENST00000604367 Q5XG85 94 aa9.46□□□□□ -0.9
CCDC12-211ENST00000604367 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
CCDC12-211ENST00000604367 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
CCDC12-211ENST00000604367 Q6ZVQ6 151 aa9.45□□□□□ -0.9
CCDC12-211ENST00000604367 OXTP01178 125 aa9.44□□□□□ -0.9
CCDC12-211ENST00000604367 HAMPP81172 84 aa9.44□□□□□ -0.9
CCDC12-211ENST00000604367 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
CCDC12-211ENST00000604367 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
CCDC12-211ENST00000604367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
CCDC12-211ENST00000604367 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
CCDC12-211ENST00000604367 ATP5EP2Q5VTU8 51 aa9.42□□□□□ -0.9
CCDC12-211ENST00000604367 UQCRQO14949 82 aa9.41□□□□□ -0.9
CCDC12-211ENST00000604367 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
CCDC12-211ENST00000604367 C3orf84H3BNL1 204 aa9.41□□□□□ -0.9
CCDC12-211ENST00000604367 RTL8CO15255 209 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms