RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
TUBE1-204ENST00000603621 TIMM17BO60830 172 aa8.46□□□□□ -1.06
TUBE1-204ENST00000603621 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
TUBE1-204ENST00000603621 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
TUBE1-204ENST00000603621 HIST3H2BBQ8N257 126 aa8.45□□□□□ -1.06
TUBE1-204ENST00000603621 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
TUBE1-204ENST00000603621 TRAV23DV6A0A075B6W5 121 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 B5MCH6 92 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 S100A6P06703 90 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 PRR4Q16378 134 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
TUBE1-204ENST00000603621 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
TUBE1-204ENST00000603621 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
TUBE1-204ENST00000603621 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
TUBE1-204ENST00000603621 LPAP08519 4548 aa8.42□□□□□ -1.06
TUBE1-204ENST00000603621 PCP2Q8IVA1 136 aa8.42□□□□□ -1.06
TUBE1-204ENST00000603621 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
TUBE1-204ENST00000603621 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
TUBE1-204ENST00000603621 AKR1D1P51857 326 aa8.41□□□□□ -1.06
TUBE1-204ENST00000603621 ZNF73O43830 326 aaPredicted RBP8.4□□□□□ -1.06
TUBE1-204ENST00000603621 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
TUBE1-204ENST00000603621 Q6ZRX8 168 aa8.4□□□□□ -1.06
TUBE1-204ENST00000603621 Q9BRP9 147 aa8.4□□□□□ -1.06
TUBE1-204ENST00000603621 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
TUBE1-204ENST00000603621 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
TUBE1-204ENST00000603621 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
TUBE1-204ENST00000603621 JOSD1Q15040 202 aaPredicted RBP8.37□□□□□ -1.07
TUBE1-204ENST00000603621 CBY1Q9Y3M2 126 aa8.37□□□□□ -1.07
TUBE1-204ENST00000603621 HSBP1L1C9JCN9 74 aa8.36□□□□□ -1.07
TUBE1-204ENST00000603621 LINC00518Q8N0U6 118 aa8.36□□□□□ -1.07
TUBE1-204ENST00000603621 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
TUBE1-204ENST00000603621 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
TUBE1-204ENST00000603621 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
TUBE1-204ENST00000603621 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
TUBE1-204ENST00000603621 A6NJY4 79 aa8.34□□□□□ -1.07
TUBE1-204ENST00000603621 SCGB1D1O95968 90 aa8.34□□□□□ -1.07
TUBE1-204ENST00000603621 IFITM1P13164 125 aa8.34□□□□□ -1.07
TUBE1-204ENST00000603621 RNF213Q63HN8 5207 aa8.34□□□□□ -1.08
TUBE1-204ENST00000603621 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-204ENST00000603621 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
TUBE1-204ENST00000603621 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
TUBE1-204ENST00000603621 Q8NBF4 154 aa8.33□□□□□ -1.08
TUBE1-204ENST00000603621 Q6ZVH6 145 aa8.32□□□□□ -1.08
TUBE1-204ENST00000603621 A6NDN8 102 aa8.31□□□□□ -1.08
TUBE1-204ENST00000603621 C5orf52A6NGY3 159 aa8.31□□□□□ -1.08
TUBE1-204ENST00000603621 MOBPQ13875 183 aa8.31□□□□□ -1.08
TUBE1-204ENST00000603621 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
TUBE1-204ENST00000603621 COX7BP24311 80 aa8.3□□□□□ -1.08
TUBE1-204ENST00000603621 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
TUBE1-204ENST00000603621 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
TUBE1-204ENST00000603621 C9orf153Q5TBE3 101 aa8.28□□□□□ -1.08
TUBE1-204ENST00000603621 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
TUBE1-204ENST00000603621 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
TUBE1-204ENST00000603621 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
TUBE1-204ENST00000603621 CTAG1AP78358 180 aa8.25□□□□□ -1.09
TUBE1-204ENST00000603621 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
TUBE1-204ENST00000603621 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
TUBE1-204ENST00000603621 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
TUBE1-204ENST00000603621 SPINK1P00995 79 aa8.23□□□□□ -1.09
TUBE1-204ENST00000603621 TAL2Q16559 108 aa8.23□□□□□ -1.09
TUBE1-204ENST00000603621 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
TUBE1-204ENST00000603621 A0A1B0GWB2 263 aa8.22□□□□□ -1.09
TUBE1-204ENST00000603621 A4D1N5 150 aa8.22□□□□□ -1.09
TUBE1-204ENST00000603621 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
TUBE1-204ENST00000603621 COX8AP10176 69 aa8.21□□□□□ -1.1
TUBE1-204ENST00000603621 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
TUBE1-204ENST00000603621 HIST1H4GQ99525 98 aa8.21□□□□□ -1.1
TUBE1-204ENST00000603621 SPRR1BP22528 89 aa8.2□□□□□ -1.1
TUBE1-204ENST00000603621 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
TUBE1-204ENST00000603621 C12orf57Q99622 126 aa8.2□□□□□ -1.1
TUBE1-204ENST00000603621 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
TUBE1-204ENST00000603621 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
TUBE1-204ENST00000603621 Q1RN00 199 aa8.19□□□□□ -1.1
TUBE1-204ENST00000603621 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
TUBE1-204ENST00000603621 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
TUBE1-204ENST00000603621 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
TUBE1-204ENST00000603621 HRCT1Q6UXD1 115 aa8.17□□□□□ -1.1
TUBE1-204ENST00000603621 VAMP8Q9BV40 100 aa8.17□□□□□ -1.1
TUBE1-204ENST00000603621 DLEU1O43261 78 aa8.16□□□□□ -1.1
TUBE1-204ENST00000603621 VAMP3Q15836 100 aa8.16□□□□□ -1.1
TUBE1-204ENST00000603621 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
TUBE1-204ENST00000603621 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-204ENST00000603621 Q8N377 158 aa8.15□□□□□ -1.1
TUBE1-204ENST00000603621 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
TUBE1-204ENST00000603621 SLC25A20O43772 301 aa8.14□□□□□ -1.11
TUBE1-204ENST00000603621 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
TUBE1-204ENST00000603621 LINC01547P58512 204 aaPredicted RBP8.13□□□□□ -1.11
TUBE1-204ENST00000603621 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
TUBE1-204ENST00000603621 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
TUBE1-204ENST00000603621 H7C2G1 150 aa8.11□□□□□ -1.11
TUBE1-204ENST00000603621 LINC00575Q6W349 94 aa8.11□□□□□ -1.11
TUBE1-204ENST00000603621 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
TUBE1-204ENST00000603621 RAB37Q96AX2 223 aa8.1□□□□□ -1.11
TUBE1-204ENST00000603621 PRO1933Q9H354 126 aa8.1□□□□□ -1.11
TUBE1-204ENST00000603621 HIGD1BQ9P298 99 aa8.1□□□□□ -1.11
TUBE1-204ENST00000603621 hADV29S1A0JD25 119 aa8.09□□□□□ -1.11
TUBE1-204ENST00000603621 CFC1BP0CG36 223 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms