RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 NTM-AS1Q6ZSK4 140 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 H0YGX0 51 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
VRK3-226ENST00000602029 C21orf62-AS1Q17RA5 79 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 CFAP161Q6P656 301 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 REG3GQ6UW15 175 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 C2orf82Q6UX34 121 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 SDIM1Q6ZPB5 146 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 Q8IZM0 81 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 COX7B2Q8TF08 81 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 IMUPQ9GZP8 106 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 CDIP1Q9H305 208 aa3.31□□□□□ -1.88
VRK3-226ENST00000602029 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 H3BQ85 93 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 SNCGO76070 127 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 NDUFC2O95298 119 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 COX6A2Q02221 97 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 SS18Q15532 418 aa3.3□□□□□ -1.88
VRK3-226ENST00000602029 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
VRK3-226ENST00000602029 CNBPP62633 177 aaKnown RBP3.29□□□□□ -1.88
VRK3-226ENST00000602029 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
VRK3-226ENST00000602029 DAND5Q8N907 189 aa3.29□□□□□ -1.88
VRK3-226ENST00000602029 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
VRK3-226ENST00000602029 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
VRK3-226ENST00000602029 PKIGQ9Y2B9 76 aa3.29□□□□□ -1.88
VRK3-226ENST00000602029 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
VRK3-226ENST00000602029 IGLV4-60A0A075B6I1 120 aa3.28□□□□□ -1.88
VRK3-226ENST00000602029 TRBV7-7A0A0K0K1E9 115 aa3.28□□□□□ -1.88
VRK3-226ENST00000602029 LINC00959A0A1B0GUT2 108 aa3.28□□□□□ -1.88
VRK3-226ENST00000602029 DNAL4O96015 105 aa3.28□□□□□ -1.88
VRK3-226ENST00000602029 PRR3P79522 188 aaKnown RBP3.28□□□□□ -1.88
VRK3-226ENST00000602029 H7C2G1 150 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 XCL1P47992 114 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 CKS1BP61024 79 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 GAGE2BQ13066 116 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 GAGE2EQ4V326 116 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 CD164L2Q6UWJ8 174 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
VRK3-226ENST00000602029 SND1-IT1Q9HBX3 110 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 GAGE2DQ9UEU5 116 aa3.27□□□□□ -1.89
VRK3-226ENST00000602029 A0A096LNI7 61 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 TEX49A0A1B0GTD5 131 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 F8WDY8 70 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 ZNF561-AS1K7EIQ3 104 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 SLPIP03973 132 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 MALP21145 153 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 C6orf226Q5I0X4 101 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 SPINK6Q6UWN8 80 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 SOSTDC1Q6X4U4 206 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 Q6ZRP5 223 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 LINC00643Q86TS7 51 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 LINC00526Q96FQ7 95 aa3.26□□□□□ -1.89
VRK3-226ENST00000602029 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
VRK3-226ENST00000602029 JMJD7-PLA2G4BH0Y9G9 81 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 MT-ATP8P03928 68 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 LINC00158P58513 81 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
VRK3-226ENST00000602029 S100A7L2Q5SY68 101 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 C15orf56Q8N910 161 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 CLEC2BQ92478 149 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 OBSCN-AS1Q96MR7 158 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 TMEM126AQ9H061 195 aa3.25□□□□□ -1.89
VRK3-226ENST00000602029 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 BAALC-AS2P0C853 105 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 NPC2P61916 151 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 C1orf137Q5JT78 98 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 ATP5EP2Q5VTU8 51 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 LINC00337Q8N6G1 96 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 ANAPC13Q9BS18 74 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 TOMM7Q9P0U1 55 aa3.24□□□□□ -1.89
VRK3-226ENST00000602029 TRBV7-6A0A0J9YX20 115 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 TMEM256-PLSCR3K7ERE1 68 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 PDE6GP18545 87 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
VRK3-226ENST00000602029 SYCNQ0VAF6 134 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 PRR4Q16378 134 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 XP32Q5T750 250 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 ORMDL1Q9P0S3 153 aa3.23□□□□□ -1.89
VRK3-226ENST00000602029 A0A0U1RQV1 116 aa3.22□□□□□ -1.89
VRK3-226ENST00000602029 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
VRK3-226ENST00000602029 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
VRK3-226ENST00000602029 UBE2BP63146 152 aa3.21□□□□□ -1.9
VRK3-226ENST00000602029 C5orf38Q86SI9 138 aa3.21□□□□□ -1.9
VRK3-226ENST00000602029 DIRC1Q969H9 104 aa3.21□□□□□ -1.9
VRK3-226ENST00000602029 TRBV10-3A0A0K0K1G6 114 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 A0A0U1RRA0 63 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 ATOX1O00244 68 aa3.2□□□□□ -1.9
VRK3-226ENST00000602029 PFN2P35080 140 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms