RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 M0R378 163 aa6.41□□□□□ -1.38
UPF1-213ENST00000601981 CHTF8P0CG12 524 aa6.41□□□□□ -1.38
UPF1-213ENST00000601981 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
UPF1-213ENST00000601981 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
UPF1-213ENST00000601981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
UPF1-213ENST00000601981 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 C9JAW5 83 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 TRACP01848 142 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
UPF1-213ENST00000601981 XGP55808 180 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 LINC01600Q96MT4 127 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
UPF1-213ENST00000601981 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
UPF1-213ENST00000601981 A0A087WYN8 130 aa6.39□□□□□ -1.39
UPF1-213ENST00000601981 SLC25A20O43772 301 aa6.39□□□□□ -1.39
UPF1-213ENST00000601981 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
UPF1-213ENST00000601981 CIRBP-AS1Q8TBR5 109 aa6.39□□□□□ -1.39
UPF1-213ENST00000601981 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
UPF1-213ENST00000601981 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 H3BT86 120 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 HAMPP81172 84 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 NKAPP1Q8N9T2 125 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 HSPG2P98160 4391 aa6.38□□□□□ -1.39
UPF1-213ENST00000601981 TRAV23DV6A0A075B6W5 121 aa6.37□□□□□ -1.39
UPF1-213ENST00000601981 A0A1B0GX51 115 aa6.37□□□□□ -1.39
UPF1-213ENST00000601981 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
UPF1-213ENST00000601981 PANO1I0J062 215 aa6.37□□□□□ -1.39
UPF1-213ENST00000601981 C7orf33Q8WU49 177 aa6.37□□□□□ -1.39
UPF1-213ENST00000601981 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
UPF1-213ENST00000601981 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
UPF1-213ENST00000601981 ANKRD29Q8N6D5 301 aa6.36□□□□□ -1.39
UPF1-213ENST00000601981 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 SMR3BP02814 79 aaPredicted RBP6.35□□□□□ -1.39
UPF1-213ENST00000601981 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 OCIAD2Q56VL3 154 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 Q8N1X5 172 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
UPF1-213ENST00000601981 HERC1Q15751 4861 aa6.34□□□□□ -1.39
UPF1-213ENST00000601981 EPM2AB3EWF7 344 aa6.34□□□□□ -1.39
UPF1-213ENST00000601981 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.39
UPF1-213ENST00000601981 DNAL4O96015 105 aa6.34□□□□□ -1.39
UPF1-213ENST00000601981 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
UPF1-213ENST00000601981 FAM19A5Q7Z5A7 132 aaPredicted RBP6.34□□□□□ -1.39
UPF1-213ENST00000601981 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
UPF1-213ENST00000601981 K7ERU9 68 aa6.33□□□□□ -1.4
UPF1-213ENST00000601981 SNCGO76070 127 aa6.33□□□□□ -1.4
UPF1-213ENST00000601981 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
UPF1-213ENST00000601981 A0A1W2PNN7 141 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 PRYO14603 147 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
UPF1-213ENST00000601981 Q5VSD8 79 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 LINC00575Q6W349 94 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
UPF1-213ENST00000601981 COX7BP24311 80 aa6.31□□□□□ -1.4
UPF1-213ENST00000601981 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
UPF1-213ENST00000601981 UBE2BP63146 152 aa6.31□□□□□ -1.4
UPF1-213ENST00000601981 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
UPF1-213ENST00000601981 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
UPF1-213ENST00000601981 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
UPF1-213ENST00000601981 J3QR89 54 aa6.3□□□□□ -1.4
UPF1-213ENST00000601981 BAALC-AS2P0C853 105 aa6.3□□□□□ -1.4
UPF1-213ENST00000601981 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
UPF1-213ENST00000601981 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
UPF1-213ENST00000601981 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
UPF1-213ENST00000601981 H3BQ85 93 aa6.28□□□□□ -1.4
UPF1-213ENST00000601981 SPRR1AP35321 89 aa6.28□□□□□ -1.4
UPF1-213ENST00000601981 TEX49A0A1B0GTD5 131 aa6.26□□□□□ -1.41
UPF1-213ENST00000601981 RPL37AP8A6NKH3 93 aa6.26□□□□□ -1.41
UPF1-213ENST00000601981 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
UPF1-213ENST00000601981 INAFM2P0DMQ5 153 aa6.26□□□□□ -1.41
UPF1-213ENST00000601981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
UPF1-213ENST00000601981 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
UPF1-213ENST00000601981 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
UPF1-213ENST00000601981 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 B5MCH6 92 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 GHRHP01286 108 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 Q6ZQY7 126 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 Q6ZRX8 168 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
UPF1-213ENST00000601981 FAT1Q14517 4588 aa6.23□□□□□ -1.41
UPF1-213ENST00000601981 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
UPF1-213ENST00000601981 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
UPF1-213ENST00000601981 JMJD7-PLA2G4BH0Y9G9 81 aa6.21□□□□□ -1.42
UPF1-213ENST00000601981 LCE2BO14633 110 aa6.21□□□□□ -1.42
UPF1-213ENST00000601981 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
UPF1-213ENST00000601981 Q9BRP9 147 aa6.2□□□□□ -1.42
UPF1-213ENST00000601981 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
UPF1-213ENST00000601981 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
UPF1-213ENST00000601981 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
UPF1-213ENST00000601981 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
UPF1-213ENST00000601981 VPS25Q9BRG1 176 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms