RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 FAM218AQ96MZ4 157 aa11.34□□□□□ -0.59
VRK3-225ENST00000601912 TRACP01848 142 aa11.33□□□□□ -0.6
VRK3-225ENST00000601912 COX7BP24311 80 aa11.33□□□□□ -0.6
VRK3-225ENST00000601912 UBE2BP63146 152 aa11.33□□□□□ -0.6
VRK3-225ENST00000601912 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.6
VRK3-225ENST00000601912 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
VRK3-225ENST00000601912 FAT2Q9NYQ8 4349 aa11.32□□□□□ -0.6
VRK3-225ENST00000601912 A0A1B0GX51 115 aa11.32□□□□□ -0.6
VRK3-225ENST00000601912 C9JAW5 83 aa11.31□□□□□ -0.6
VRK3-225ENST00000601912 F8W1H4 67 aa11.31□□□□□ -0.6
VRK3-225ENST00000601912 DNAL4O96015 105 aa11.31□□□□□ -0.6
VRK3-225ENST00000601912 ELOF1P60002 83 aaKnown RBP11.31□□□□□ -0.6
VRK3-225ENST00000601912 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
VRK3-225ENST00000601912 PLAC8Q9NZF1 115 aa11.31□□□□□ -0.6
VRK3-225ENST00000601912 SLC25A20O43772 301 aa11.3□□□□□ -0.6
VRK3-225ENST00000601912 LINC00575Q6W349 94 aa11.3□□□□□ -0.6
VRK3-225ENST00000601912 ETDCA0A1B0GVM5 59 aa11.3□□□□□ -0.6
VRK3-225ENST00000601912 SPRR1AP35321 89 aa11.3□□□□□ -0.6
VRK3-225ENST00000601912 hADV29S1A0JD25 119 aa11.28□□□□□ -0.6
VRK3-225ENST00000601912 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
VRK3-225ENST00000601912 DNAH11Q96DT5 4516 aa11.28□□□□□ -0.6
VRK3-225ENST00000601912 KRTAP10-1P60331 282 aa11.27□□□□□ -0.6
VRK3-225ENST00000601912 PRO0461Q9UI25 63 aa11.27□□□□□ -0.6
VRK3-225ENST00000601912 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.61
VRK3-225ENST00000601912 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
VRK3-225ENST00000601912 RYR2Q92736 4967 aa11.25□□□□□ -0.61
VRK3-225ENST00000601912 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
VRK3-225ENST00000601912 B5MCH6 92 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 Q6ZRX8 168 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 Q6ZSA8 131 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 FAM30AQ9NZY2 134 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 A0A1B0GVY2 172 aa11.24□□□□□ -0.61
VRK3-225ENST00000601912 H3BT86 120 aa11.23□□□□□ -0.61
VRK3-225ENST00000601912 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
VRK3-225ENST00000601912 PKD1P98161 4303 aa11.22□□□□□ -0.61
VRK3-225ENST00000601912 KRTAP11-1Q8IUC1 163 aa11.22□□□□□ -0.61
VRK3-225ENST00000601912 DHRS4-AS1Q9P1J3 65 aa11.22□□□□□ -0.61
VRK3-225ENST00000601912 BAALC-AS2P0C853 105 aa11.21□□□□□ -0.61
VRK3-225ENST00000601912 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
VRK3-225ENST00000601912 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
VRK3-225ENST00000601912 CIRBP-AS1Q8TBR5 109 aa11.21□□□□□ -0.61
VRK3-225ENST00000601912 ORMDL1Q9P0S3 153 aa11.21□□□□□ -0.61
VRK3-225ENST00000601912 DNAH5Q8TE73 4624 aa11.2□□□□□ -0.62
VRK3-225ENST00000601912 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.19□□□□□ -0.62
VRK3-225ENST00000601912 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
VRK3-225ENST00000601912 Q6ZQY7 126 aa11.18□□□□□ -0.62
VRK3-225ENST00000601912 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
VRK3-225ENST00000601912 BCE1O60756 84 aa11.17□□□□□ -0.62
VRK3-225ENST00000601912 GHRHP01286 108 aa11.17□□□□□ -0.62
VRK3-225ENST00000601912 Q9BRP9 147 aa11.17□□□□□ -0.62
VRK3-225ENST00000601912 H0Y9J4 135 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 H3BQ85 93 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 UBE2AP49459 152 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 PRLHP81277 87 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
VRK3-225ENST00000601912 TMEM256-PLSCR3K7ERE1 68 aa11.15□□□□□ -0.62
VRK3-225ENST00000601912 PSORS1C2Q9UIG4 136 aa11.14□□□□□ -0.63
VRK3-225ENST00000601912 TEN1Q86WV5 123 aa11.13□□□□□ -0.63
VRK3-225ENST00000601912 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
VRK3-225ENST00000601912 HIGD2AQ9BW72 106 aa11.12□□□□□ -0.63
VRK3-225ENST00000601912 HAMPP81172 84 aa11.11□□□□□ -0.63
VRK3-225ENST00000601912 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
VRK3-225ENST00000601912 DNAH8Q96JB1 4490 aa11.1□□□□□ -0.63
VRK3-225ENST00000601912 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
VRK3-225ENST00000601912 KRTAP13-1Q8IUC0 172 aa11.08□□□□□ -0.64
VRK3-225ENST00000601912 PKHD1P08F94 4074 aa11.07□□□□□ -0.64
VRK3-225ENST00000601912 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
VRK3-225ENST00000601912 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
VRK3-225ENST00000601912 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
VRK3-225ENST00000601912 ST20-AS1Q8NBB2 130 aa11.05□□□□□ -0.64
VRK3-225ENST00000601912 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
VRK3-225ENST00000601912 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
VRK3-225ENST00000601912 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
VRK3-225ENST00000601912 ZNF861PO60384 105 aa11.03□□□□□ -0.64
VRK3-225ENST00000601912 IGLV7-43P04211 117 aa11.02□□□□□ -0.64
VRK3-225ENST00000601912 Q8N377 158 aa11.02□□□□□ -0.64
VRK3-225ENST00000601912 LINC01547P58512 204 aaPredicted RBP11.01□□□□□ -0.65
VRK3-225ENST00000601912 RYR3Q15413 4870 aa11□□□□□ -0.65
VRK3-225ENST00000601912 J3QR89 54 aa11□□□□□ -0.65
VRK3-225ENST00000601912 XGP55808 180 aa11□□□□□ -0.65
VRK3-225ENST00000601912 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
VRK3-225ENST00000601912 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
VRK3-225ENST00000601912 LRP1BQ9NZR2 4599 aa11□□□□□ -0.65
VRK3-225ENST00000601912 A0A1B0GV72 72 aa10.98□□□□□ -0.65
VRK3-225ENST00000601912 K7ERU9 68 aa10.98□□□□□ -0.65
VRK3-225ENST00000601912 RBM3P98179 157 aaKnown RBP10.98□□□□□ -0.65
VRK3-225ENST00000601912 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
VRK3-225ENST00000601912 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
VRK3-225ENST00000601912 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.66
VRK3-225ENST00000601912 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
VRK3-225ENST00000601912 SPRR1BP22528 89 aa10.93□□□□□ -0.66
VRK3-225ENST00000601912 C3orf22Q8N5N4 141 aa10.93□□□□□ -0.66
VRK3-225ENST00000601912 DSCR8Q96T75 97 aa10.93□□□□□ -0.66
VRK3-225ENST00000601912 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
VRK3-225ENST00000601912 F8WEM9 126 aa10.92□□□□□ -0.66
VRK3-225ENST00000601912 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
VRK3-225ENST00000601912 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
VRK3-225ENST00000601912 SMIM29Q86T20 159 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms