RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 MIEN1Q9BRT3 115 aa5.38□□□□□ -1.55
VRK3-224ENST00000601849 TRBV10-3A0A0K0K1G6 114 aa5.37□□□□□ -1.55
VRK3-224ENST00000601849 B5MCH6 92 aa5.37□□□□□ -1.55
VRK3-224ENST00000601849 DDTP30046 118 aa5.37□□□□□ -1.55
VRK3-224ENST00000601849 HINT1P49773 126 aaPredicted RBP5.37□□□□□ -1.55
VRK3-224ENST00000601849 S100A7L2Q5SY68 101 aa5.37□□□□□ -1.55
VRK3-224ENST00000601849 TRBV10-2A0A0K0K1G8 114 aa5.36□□□□□ -1.55
VRK3-224ENST00000601849 C5orf52A6NGY3 159 aa5.36□□□□□ -1.55
VRK3-224ENST00000601849 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
VRK3-224ENST00000601849 C9orf153Q5TBE3 101 aa5.36□□□□□ -1.55
VRK3-224ENST00000601849 Q8N377 158 aa5.36□□□□□ -1.55
VRK3-224ENST00000601849 CBY1Q9Y3M2 126 aa5.36□□□□□ -1.55
VRK3-224ENST00000601849 LEPROTL1O95214 131 aa5.35□□□□□ -1.55
VRK3-224ENST00000601849 FABP4P15090 132 aa5.35□□□□□ -1.55
VRK3-224ENST00000601849 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
VRK3-224ENST00000601849 Q6ZRX8 168 aa5.34□□□□□ -1.55
VRK3-224ENST00000601849 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
VRK3-224ENST00000601849 XP32Q5T750 250 aa5.33□□□□□ -1.56
VRK3-224ENST00000601849 SLC25A34Q6PIV7 304 aa5.33□□□□□ -1.56
VRK3-224ENST00000601849 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
VRK3-224ENST00000601849 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
VRK3-224ENST00000601849 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
VRK3-224ENST00000601849 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
VRK3-224ENST00000601849 H0Y8G0 127 aa5.32□□□□□ -1.56
VRK3-224ENST00000601849 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
VRK3-224ENST00000601849 HERVK_113P61574 105 aa5.32□□□□□ -1.56
VRK3-224ENST00000601849 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
VRK3-224ENST00000601849 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 LEPROTO15243 131 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 NDUFC2O95298 119 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 PLNP26678 52 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 NMUP48645 174 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 AKR1D1P51857 326 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 Q9BRP9 147 aa5.31□□□□□ -1.56
VRK3-224ENST00000601849 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
VRK3-224ENST00000601849 LGALS3P17931 250 aaKnown RBP5.3□□□□□ -1.56
VRK3-224ENST00000601849 KRTDAPP60985 99 aa5.3□□□□□ -1.56
VRK3-224ENST00000601849 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
VRK3-224ENST00000601849 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
VRK3-224ENST00000601849 C20orf202A1L168 122 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 SYS1-DBNDD2H3BUS1 97 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 J3QQQ9 107 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
VRK3-224ENST00000601849 GHRHP01286 108 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 IGLV6-57P01721 117 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
VRK3-224ENST00000601849 DPM2O94777 84 aa5.28□□□□□ -1.56
VRK3-224ENST00000601849 C3orf79P0CE67 100 aa5.28□□□□□ -1.56
VRK3-224ENST00000601849 LINC01545Q5VT33 79 aa5.28□□□□□ -1.56
VRK3-224ENST00000601849 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
VRK3-224ENST00000601849 LAMTOR3Q9UHA4 124 aa5.28□□□□□ -1.56
VRK3-224ENST00000601849 IGLV8-61A0A075B6I0 122 aa5.27□□□□□ -1.57
VRK3-224ENST00000601849 SCGB1D1O95968 90 aa5.27□□□□□ -1.57
VRK3-224ENST00000601849 IGKCP01834 107 aa5.27□□□□□ -1.57
VRK3-224ENST00000601849 DHRS4-AS1Q9P1J3 65 aa5.27□□□□□ -1.57
VRK3-224ENST00000601849 LOC105371267A0A1B0GV96 52 aa5.26□□□□□ -1.57
VRK3-224ENST00000601849 OR13C6PQ8NH95 151 aa5.26□□□□□ -1.57
VRK3-224ENST00000601849 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
VRK3-224ENST00000601849 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
VRK3-224ENST00000601849 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
VRK3-224ENST00000601849 C9orf92A6NGG3 77 aa5.24□□□□□ -1.57
VRK3-224ENST00000601849 EIF4EBP3O60516 100 aaPredicted RBP5.24□□□□□ -1.57
VRK3-224ENST00000601849 TSPEAR-AS2P59090 65 aa5.24□□□□□ -1.57
VRK3-224ENST00000601849 NPC2P61916 151 aa5.24□□□□□ -1.57
VRK3-224ENST00000601849 TAL2Q16559 108 aa5.24□□□□□ -1.57
VRK3-224ENST00000601849 M0R2T5 61 aa5.23□□□□□ -1.57
VRK3-224ENST00000601849 SPRR1BP22528 89 aa5.23□□□□□ -1.57
VRK3-224ENST00000601849 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
VRK3-224ENST00000601849 SPANXCQ9NY87 97 aa5.23□□□□□ -1.57
VRK3-224ENST00000601849 A0A0J9YXY3 114 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 HSBP1L1C9JCN9 74 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 E9PLD3 99 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 H7C2G1 150 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 CD164Q04900 197 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 LINC00518Q8N0U6 118 aa5.22□□□□□ -1.57
VRK3-224ENST00000601849 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
VRK3-224ENST00000601849 PYY3Q5JQD4 70 aa5.21□□□□□ -1.58
VRK3-224ENST00000601849 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
VRK3-224ENST00000601849 ATOH7Q8N100 152 aa5.21□□□□□ -1.58
VRK3-224ENST00000601849 DEFB105AQ8NG35 78 aa5.21□□□□□ -1.58
VRK3-224ENST00000601849 TEX49A0A1B0GTD5 131 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 COX7BP24311 80 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 MT1HP80294 61 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 VAMP8Q9BV40 100 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 SPANXDQ9BXN6 97 aa5.2□□□□□ -1.58
VRK3-224ENST00000601849 SOSTDC1Q6X4U4 206 aa5.19□□□□□ -1.58
VRK3-224ENST00000601849 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
VRK3-224ENST00000601849 TIMM17BO60830 172 aa5.18□□□□□ -1.58
VRK3-224ENST00000601849 SMCPP49901 116 aaPredicted RBP5.18□□□□□ -1.58
VRK3-224ENST00000601849 Q1RN00 199 aa5.18□□□□□ -1.58
VRK3-224ENST00000601849 COPS9Q8WXC6 57 aa5.18□□□□□ -1.58
VRK3-224ENST00000601849 TCL1BO95988 128 aa5.17□□□□□ -1.58
VRK3-224ENST00000601849 ELOF1P60002 83 aaKnown RBP5.17□□□□□ -1.58
VRK3-224ENST00000601849 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
VRK3-224ENST00000601849 Q5XG85 94 aa5.17□□□□□ -1.58
VRK3-224ENST00000601849 C12orf57Q99622 126 aa5.17□□□□□ -1.58
VRK3-224ENST00000601849 PAM16Q9Y3D7 125 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms