RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	TENM1	Q9UKZ4	2725 aa		10.94	□□□□□ -0.66
CAPN12-211	ENST00000601685		A0A0U1RQV1	116 aa		10.93	□□□□□ -0.66
CAPN12-211	ENST00000601685	PRY	O14603	147 aa		10.92	□□□□□ -0.66
CAPN12-211	ENST00000601685	TRRAP	Q9Y4A5	3859 aa		10.91	□□□□□ -0.66
CAPN12-211	ENST00000601685	INAFM1	C9JVW0	142 aa		10.91	□□□□□ -0.66
CAPN12-211	ENST00000601685	C15orf56	Q8N910	161 aa		10.91	□□□□□ -0.66
CAPN12-211	ENST00000601685	WFDC10B	Q8IUB3	73 aa		10.9	□□□□□ -0.66
CAPN12-211	ENST00000601685	OTOG	Q6ZRI0	2925 aa		10.9	□□□□□ -0.66
CAPN12-211	ENST00000601685	C3orf84	H3BNL1	204 aa		10.89	□□□□□ -0.67
CAPN12-211	ENST00000601685		Q6ZRP5	223 aa		10.88	□□□□□ -0.67
CAPN12-211	ENST00000601685	FAM229B	Q4G0N7	80 aa		10.87	□□□□□ -0.67
CAPN12-211	ENST00000601685		Q8N377	158 aa		10.87	□□□□□ -0.67
CAPN12-211	ENST00000601685	ATR	Q13535	2644 aa		10.87	□□□□□ -0.67
CAPN12-211	ENST00000601685	IGLV5-48	A0A075B6I7	105 aa		10.86	□□□□□ -0.67
CAPN12-211	ENST00000601685	FUS	P35637	526 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CAPN12-211	ENST00000601685	KCNQ1DN	Q9H478	68 aa		10.86	□□□□□ -0.67
CAPN12-211	ENST00000601685	DEFB105A	Q8NG35	78 aa		10.85	□□□□□ -0.67
CAPN12-211	ENST00000601685	HIVEP1	P15822	2718 aa		10.85	□□□□□ -0.67
CAPN12-211	ENST00000601685	HIGD2A	Q9BW72	106 aa		10.85	□□□□□ -0.67
CAPN12-211	ENST00000601685	NSD1	Q96L73	2696 aa	Predicted RBP	10.85	□□□□□ -0.67
CAPN12-211	ENST00000601685	BAHCC1	Q9P281	2608 aa		10.85	□□□□□ -0.67
CAPN12-211	ENST00000601685	KPRP	Q5T749	579 aa	Predicted RBP	10.84	□□□□□ -0.67
CAPN12-211	ENST00000601685		Q6ZTC4	211 aa		10.84	□□□□□ -0.67
CAPN12-211	ENST00000601685		A0A1B0GW54	56 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685		F8WDY8	70 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685		H3BNG1	76 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685	ESRG	Q1W209	222 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685	NKAPP1	Q8N9T2	125 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685	C7orf33	Q8WU49	177 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685	C1orf43	Q9BWL3	253 aa		10.81	□□□□□ -0.68
CAPN12-211	ENST00000601685	SERTAD4-AS1	Q5TG53	156 aa		10.8	□□□□□ -0.68
CAPN12-211	ENST00000601685	SMIM29	Q86T20	159 aa		10.8	□□□□□ -0.68
CAPN12-211	ENST00000601685	TEP1	Q99973	2627 aa	Known RBP	10.8	□□□□□ -0.68
CAPN12-211	ENST00000601685	SYCN	Q0VAF6	134 aa		10.79	□□□□□ -0.68
CAPN12-211	ENST00000601685	MPLKIP	Q8TAP9	179 aa		10.79	□□□□□ -0.68
CAPN12-211	ENST00000601685		A0A1W2PNM2	257 aa		10.79	□□□□□ -0.68
CAPN12-211	ENST00000601685	FAM30A	Q9NZY2	134 aa		10.79	□□□□□ -0.68
CAPN12-211	ENST00000601685	LCE6A	A0A183	80 aa		10.78	□□□□□ -0.68
CAPN12-211	ENST00000601685	BRK1	Q8WUW1	75 aa		10.77	□□□□□ -0.68
CAPN12-211	ENST00000601685	DHRS4-AS1	Q9P1J3	65 aa		10.77	□□□□□ -0.68
CAPN12-211	ENST00000601685	TNP2	Q05952	138 aa		10.76	□□□□□ -0.69
CAPN12-211	ENST00000601685	RETN	Q9HD89	108 aa		10.76	□□□□□ -0.69
CAPN12-211	ENST00000601685		Q6ZRX8	168 aa		10.76	□□□□□ -0.69
CAPN12-211	ENST00000601685	IGKV2D-24	A0A075B6R9	120 aa		10.75	□□□□□ -0.69
CAPN12-211	ENST00000601685	C1orf137	Q5JT78	98 aa		10.74	□□□□□ -0.69
CAPN12-211	ENST00000601685		Q9BRP9	147 aa		10.74	□□□□□ -0.69
CAPN12-211	ENST00000601685	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.74	□□□□□ -0.69
CAPN12-211	ENST00000601685		Q8NBF4	154 aa		10.74	□□□□□ -0.69
CAPN12-211	ENST00000601685	PKIG	Q9Y2B9	76 aa		10.73	□□□□□ -0.69
CAPN12-211	ENST00000601685	PKD1L1	Q8TDX9	2849 aa		10.73	□□□□□ -0.69
CAPN12-211	ENST00000601685	PLA2G2D	Q9UNK4	145 aa		10.73	□□□□□ -0.69
CAPN12-211	ENST00000601685	LINC01556	Q5JQF7	62 aa		10.72	□□□□□ -0.69
CAPN12-211	ENST00000601685	OXLD1	Q5BKU9	147 aa		10.72	□□□□□ -0.69
CAPN12-211	ENST00000601685	SPRR4	Q96PI1	79 aa		10.72	□□□□□ -0.69
CAPN12-211	ENST00000601685	hDV103S1	A0JD37	113 aa		10.71	□□□□□ -0.69
CAPN12-211	ENST00000601685	RPL37AP8	A6NKH3	93 aa		10.71	□□□□□ -0.69
CAPN12-211	ENST00000601685	TLX1NB	P0CAT3	122 aa		10.71	□□□□□ -0.69
CAPN12-211	ENST00000601685	SPRR1A	P35321	89 aa		10.71	□□□□□ -0.69
CAPN12-211	ENST00000601685	DSCR10	P59022	87 aa		10.71	□□□□□ -0.69
CAPN12-211	ENST00000601685	ST20-AS1	Q8NBB2	130 aa		10.71	□□□□□ -0.7
CAPN12-211	ENST00000601685	ZCCHC13	Q8WW36	166 aa	Known RBP	10.7	□□□□□ -0.7
CAPN12-211	ENST00000601685	IGLV1-50	A0A075B6I6	118 aa		10.7	□□□□□ -0.7
CAPN12-211	ENST00000601685	ETDC	A0A1B0GVM5	59 aa		10.69	□□□□□ -0.7
CAPN12-211	ENST00000601685	IGLV5-37	A0A075B6J1	123 aa		10.68	□□□□□ -0.7
CAPN12-211	ENST00000601685	FAM168B	A1KXE4	195 aa		10.67	□□□□□ -0.7
CAPN12-211	ENST00000601685		K7EQZ3	153 aa		10.67	□□□□□ -0.7
CAPN12-211	ENST00000601685	KRTAP10-11	P60412	298 aa		10.66	□□□□□ -0.7
CAPN12-211	ENST00000601685	C1orf64	Q8NEQ6	169 aa		10.65	□□□□□ -0.71
CAPN12-211	ENST00000601685	ANK2	Q01484	3957 aa		10.64	□□□□□ -0.71
CAPN12-211	ENST00000601685	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.63	□□□□□ -0.71
CAPN12-211	ENST00000601685	KRTAP7-1	Q8IUC3	87 aa		10.63	□□□□□ -0.71
CAPN12-211	ENST00000601685	TENM3	Q9P273	2699 aa		10.62	□□□□□ -0.71
CAPN12-211	ENST00000601685		Q1T7F1	81 aa		10.61	□□□□□ -0.71
CAPN12-211	ENST00000601685	HCG22	E2RYF7	251 aa		10.61	□□□□□ -0.71
CAPN12-211	ENST00000601685	DNAH10OS	P0CZ25	163 aa		10.61	□□□□□ -0.71
CAPN12-211	ENST00000601685	C1orf195	Q5TG92	126 aa		10.61	□□□□□ -0.71
CAPN12-211	ENST00000601685	LRCOL1	A6NCL2	159 aa		10.6	□□□□□ -0.71
CAPN12-211	ENST00000601685	DEFB131B	A0A096LNP1	70 aa		10.6	□□□□□ -0.71
CAPN12-211	ENST00000601685	UBE2B	P63146	152 aa		10.59	□□□□□ -0.71
CAPN12-211	ENST00000601685	MRPL55	Q7Z7F7	128 aa	Known RBP	10.59	□□□□□ -0.71
CAPN12-211	ENST00000601685	CYP4F30P	Q9H0H9	118 aa		10.59	□□□□□ -0.71
CAPN12-211	ENST00000601685	LINC00476	Q8WZB0	136 aa		10.58	□□□□□ -0.72
CAPN12-211	ENST00000601685	PSCA	O43653	123 aa		10.57	□□□□□ -0.72
CAPN12-211	ENST00000601685	F8	P00451	2351 aa		10.56	□□□□□ -0.72
CAPN12-211	ENST00000601685	C11orf45	Q8TAV5	145 aa		10.56	□□□□□ -0.72
CAPN12-211	ENST00000601685	CASC10	Q5T4H9	136 aa		10.56	□□□□□ -0.72
CAPN12-211	ENST00000601685	REG3G	Q6UW15	175 aa		10.54	□□□□□ -0.72
CAPN12-211	ENST00000601685	MAST4	O15021	2626 aa		10.54	□□□□□ -0.72
CAPN12-211	ENST00000601685	IGFL1	Q6UW32	110 aa		10.53	□□□□□ -0.72
CAPN12-211	ENST00000601685		A0A0G2JQZ4	141 aa		10.53	□□□□□ -0.72
CAPN12-211	ENST00000601685		A0A1W2PNN7	141 aa		10.53	□□□□□ -0.72
CAPN12-211	ENST00000601685	NDUFB1	O75438	58 aa		10.52	□□□□□ -0.73
CAPN12-211	ENST00000601685	PRR4	Q16378	134 aa		10.52	□□□□□ -0.73
CAPN12-211	ENST00000601685	PRR15	Q8IV56	129 aa		10.51	□□□□□ -0.73
CAPN12-211	ENST00000601685	DEFB116	Q30KQ4	102 aa		10.5	□□□□□ -0.73
CAPN12-211	ENST00000601685	WFDC13	Q8IUB5	93 aa		10.49	□□□□□ -0.73
CAPN12-211	ENST00000601685	TRAV22	A0A0B4J277	110 aa		10.49	□□□□□ -0.73
CAPN12-211	ENST00000601685	MP68	P56378	58 aa		10.48	□□□□□ -0.73
CAPN12-211	ENST00000601685		V9GYY9	64 aa		10.48	□□□□□ -0.73
CAPN12-211	ENST00000601685	STAB1	Q9NY15	2570 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 359.9 ms