RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SPRR1AP35321 89 aa7.79□□□□□ -1.16
SHKBP1-208ENST00000595726 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
SHKBP1-208ENST00000595726 FAM229BQ4G0N7 80 aa7.79□□□□□ -1.16
SHKBP1-208ENST00000595726 KCNQ1DNQ9H478 68 aa7.79□□□□□ -1.16
SHKBP1-208ENST00000595726 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
SHKBP1-208ENST00000595726 S100A2P29034 98 aa7.78□□□□□ -1.16
SHKBP1-208ENST00000595726 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
SHKBP1-208ENST00000595726 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
SHKBP1-208ENST00000595726 HIGD2AQ9BW72 106 aa7.78□□□□□ -1.16
SHKBP1-208ENST00000595726 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 MT1HP80294 61 aa7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 SOSTDC1Q6X4U4 206 aa7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
SHKBP1-208ENST00000595726 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
SHKBP1-208ENST00000595726 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
SHKBP1-208ENST00000595726 NDUFC2O95298 119 aa7.76□□□□□ -1.17
SHKBP1-208ENST00000595726 KRTDAPP60985 99 aa7.76□□□□□ -1.17
SHKBP1-208ENST00000595726 DDTP30046 118 aa7.75□□□□□ -1.17
SHKBP1-208ENST00000595726 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
SHKBP1-208ENST00000595726 NPC2P61916 151 aa7.75□□□□□ -1.17
SHKBP1-208ENST00000595726 LITAFQ99732 161 aa7.75□□□□□ -1.17
SHKBP1-208ENST00000595726 ETDCA0A1B0GVM5 59 aa7.74□□□□□ -1.17
SHKBP1-208ENST00000595726 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
SHKBP1-208ENST00000595726 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
SHKBP1-208ENST00000595726 C3orf22Q8N5N4 141 aa7.74□□□□□ -1.17
SHKBP1-208ENST00000595726 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
SHKBP1-208ENST00000595726 ZNF815PA8K554 130 aa7.73□□□□□ -1.17
SHKBP1-208ENST00000595726 S100A12P80511 92 aa7.73□□□□□ -1.17
SHKBP1-208ENST00000595726 SPRR4Q96PI1 79 aa7.73□□□□□ -1.17
SHKBP1-208ENST00000595726 TIMM17BO60830 172 aa7.72□□□□□ -1.17
SHKBP1-208ENST00000595726 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
SHKBP1-208ENST00000595726 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
SHKBP1-208ENST00000595726 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
SHKBP1-208ENST00000595726 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
SHKBP1-208ENST00000595726 C20orf202A1L168 122 aa7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 B5MCH6 92 aa7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 CTAG1AP78358 180 aa7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 S100A7L2Q5SY68 101 aa7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
SHKBP1-208ENST00000595726 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
SHKBP1-208ENST00000595726 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
SHKBP1-208ENST00000595726 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 ANKRD39Q53RE8 183 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 Q6ZRX8 168 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 ATOH7Q8N100 152 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 HIST1H2BLQ99880 126 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
SHKBP1-208ENST00000595726 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
SHKBP1-208ENST00000595726 Q9BRP9 147 aa7.68□□□□□ -1.18
SHKBP1-208ENST00000595726 LOC105371267A0A1B0GV96 52 aa7.67□□□□□ -1.18
SHKBP1-208ENST00000595726 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
SHKBP1-208ENST00000595726 ZNF73O43830 326 aaPredicted RBP7.66□□□□□ -1.18
SHKBP1-208ENST00000595726 AKR1D1P51857 326 aa7.66□□□□□ -1.18
SHKBP1-208ENST00000595726 LINC00483Q53H64 154 aa7.66□□□□□ -1.18
SHKBP1-208ENST00000595726 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
SHKBP1-208ENST00000595726 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
SHKBP1-208ENST00000595726 SSPOA2VEC9 5147 aa7.65□□□□□ -1.18
SHKBP1-208ENST00000595726 SCGB1D4Q6XE38 83 aa7.65□□□□□ -1.18
SHKBP1-208ENST00000595726 USH2AO75445 5202 aa7.64□□□□□ -1.19
SHKBP1-208ENST00000595726 JOSD1Q15040 202 aaPredicted RBP7.63□□□□□ -1.19
SHKBP1-208ENST00000595726 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
SHKBP1-208ENST00000595726 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
SHKBP1-208ENST00000595726 OR13C6PQ8NH95 151 aa7.63□□□□□ -1.19
SHKBP1-208ENST00000595726 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
SHKBP1-208ENST00000595726 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
SHKBP1-208ENST00000595726 XP32Q5T750 250 aa7.6□□□□□ -1.19
SHKBP1-208ENST00000595726 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
SHKBP1-208ENST00000595726 Q8NBF4 154 aa7.6□□□□□ -1.19
SHKBP1-208ENST00000595726 IFITM1P13164 125 aa7.59□□□□□ -1.19
SHKBP1-208ENST00000595726 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
SHKBP1-208ENST00000595726 Q6ZVH6 145 aa7.59□□□□□ -1.19
SHKBP1-208ENST00000595726 COPS9Q8WXC6 57 aa7.59□□□□□ -1.19
SHKBP1-208ENST00000595726 IGLV9-49A0A0B4J1Y8 123 aa7.58□□□□□ -1.2
SHKBP1-208ENST00000595726 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
SHKBP1-208ENST00000595726 MOBPQ13875 183 aa7.58□□□□□ -1.2
SHKBP1-208ENST00000595726 ST20-AS1Q8NBB2 130 aa7.58□□□□□ -1.2
SHKBP1-208ENST00000595726 M0R2T5 61 aa7.57□□□□□ -1.2
SHKBP1-208ENST00000595726 MUSTN1Q8IVN3 82 aa7.57□□□□□ -1.2
SHKBP1-208ENST00000595726 ELOF1P60002 83 aaKnown RBP7.56□□□□□ -1.2
SHKBP1-208ENST00000595726 C6orf99Q4VX62 202 aa7.56□□□□□ -1.2
SHKBP1-208ENST00000595726 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
SHKBP1-208ENST00000595726 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
SHKBP1-208ENST00000595726 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
SHKBP1-208ENST00000595726 DHRS4-AS1Q9P1J3 65 aa7.55□□□□□ -1.2
SHKBP1-208ENST00000595726 SYNE2Q8WXH0 6885 aaKnown RBP7.54□□□□□ -1.2
SHKBP1-208ENST00000595726 SPINK1P00995 79 aa7.54□□□□□ -1.2
SHKBP1-208ENST00000595726 COX7BP24311 80 aa7.54□□□□□ -1.2
SHKBP1-208ENST00000595726 PYY3Q5JQD4 70 aa7.54□□□□□ -1.2
SHKBP1-208ENST00000595726 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
SHKBP1-208ENST00000595726 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
SHKBP1-208ENST00000595726 A6NDN8 102 aa7.53□□□□□ -1.2
SHKBP1-208ENST00000595726 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
SHKBP1-208ENST00000595726 SPRR1BP22528 89 aa7.52□□□□□ -1.21
SHKBP1-208ENST00000595726 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
SHKBP1-208ENST00000595726 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
SHKBP1-208ENST00000595726 C12orf57Q99622 126 aa7.51□□□□□ -1.21
SHKBP1-208ENST00000595726 TRAV13-2A0A0B4J235 113 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms