RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
SCAF1-202ENST00000595242 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 C9JAW5 83 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 H3BT86 120 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 ZNF561-AS1K7EIQ3 104 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 MTURNQ8N3F0 131 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 RMI2Q96E14 147 aa8.19□□□□□ -1.1
SCAF1-202ENST00000595242 TRACP01848 142 aa8.18□□□□□ -1.1
SCAF1-202ENST00000595242 SMIM11BQ8TCY0 68 aa8.18□□□□□ -1.1
SCAF1-202ENST00000595242 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
SCAF1-202ENST00000595242 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
SCAF1-202ENST00000595242 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
SCAF1-202ENST00000595242 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
SCAF1-202ENST00000595242 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
SCAF1-202ENST00000595242 H0YGX0 51 aa8.16□□□□□ -1.1
SCAF1-202ENST00000595242 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
SCAF1-202ENST00000595242 Q8NDZ9 215 aa8.15□□□□□ -1.1
SCAF1-202ENST00000595242 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
SCAF1-202ENST00000595242 J3QR89 54 aa8.14□□□□□ -1.11
SCAF1-202ENST00000595242 PPDPFLQ8WWR9 84 aa8.14□□□□□ -1.11
SCAF1-202ENST00000595242 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
SCAF1-202ENST00000595242 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
SCAF1-202ENST00000595242 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
SCAF1-202ENST00000595242 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
SCAF1-202ENST00000595242 LPAP08519 4548 aa8.13□□□□□ -1.11
SCAF1-202ENST00000595242 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
SCAF1-202ENST00000595242 A0A1B0GX51 115 aa8.11□□□□□ -1.11
SCAF1-202ENST00000595242 USP17L23D6RBM5 183 aa8.11□□□□□ -1.11
SCAF1-202ENST00000595242 IGLV6-57P01721 117 aa8.11□□□□□ -1.11
SCAF1-202ENST00000595242 MUC2Q02817 5179 aa8.11□□□□□ -1.11
SCAF1-202ENST00000595242 NCR3O14931 201 aa8.1□□□□□ -1.11
SCAF1-202ENST00000595242 VPREB1P12018 145 aa8.1□□□□□ -1.11
SCAF1-202ENST00000595242 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
SCAF1-202ENST00000595242 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
SCAF1-202ENST00000595242 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
SCAF1-202ENST00000595242 A0A087WYN8 130 aa8.07□□□□□ -1.12
SCAF1-202ENST00000595242 RPL18AQ02543 176 aaKnown RBP8.07□□□□□ -1.12
SCAF1-202ENST00000595242 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
SCAF1-202ENST00000595242 Q6ZRP5 223 aa8.07□□□□□ -1.12
SCAF1-202ENST00000595242 XAGE1AQ9HD64 81 aa8.07□□□□□ -1.12
SCAF1-202ENST00000595242 SLPIP03973 132 aa8.06□□□□□ -1.12
SCAF1-202ENST00000595242 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
SCAF1-202ENST00000595242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
SCAF1-202ENST00000595242 M0R378 163 aa8.05□□□□□ -1.12
SCAF1-202ENST00000595242 CBY1Q9Y3M2 126 aa8.05□□□□□ -1.12
SCAF1-202ENST00000595242 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
SCAF1-202ENST00000595242 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
SCAF1-202ENST00000595242 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
SCAF1-202ENST00000595242 DNAL4O96015 105 aa8.04□□□□□ -1.12
SCAF1-202ENST00000595242 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
SCAF1-202ENST00000595242 C14orf177Q52M58 125 aa8.04□□□□□ -1.12
SCAF1-202ENST00000595242 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
SCAF1-202ENST00000595242 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
SCAF1-202ENST00000595242 PANO1I0J062 215 aa8.03□□□□□ -1.12
SCAF1-202ENST00000595242 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
SCAF1-202ENST00000595242 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
SCAF1-202ENST00000595242 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
SCAF1-202ENST00000595242 CNBPP62633 177 aaKnown RBP8.02□□□□□ -1.13
SCAF1-202ENST00000595242 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
SCAF1-202ENST00000595242 GAGE2DQ9UEU5 116 aa8.02□□□□□ -1.13
SCAF1-202ENST00000595242 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
SCAF1-202ENST00000595242 LINC00575Q6W349 94 aa8.01□□□□□ -1.13
SCAF1-202ENST00000595242 DIRC1Q969H9 104 aa8□□□□□ -1.13
SCAF1-202ENST00000595242 FAM240AA0A1B0GVK7 77 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
SCAF1-202ENST00000595242 SNCGO76070 127 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 ORMDL1Q9P0S3 153 aa7.99□□□□□ -1.13
SCAF1-202ENST00000595242 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
SCAF1-202ENST00000595242 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
SCAF1-202ENST00000595242 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
SCAF1-202ENST00000595242 A0A0U1RQV1 116 aa7.97□□□□□ -1.13
SCAF1-202ENST00000595242 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
SCAF1-202ENST00000595242 hADV29S1A0JD25 119 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 H3BQ85 93 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 COX7BP24311 80 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 DPH3Q96FX2 82 aa7.96□□□□□ -1.14
SCAF1-202ENST00000595242 TMEM256-PLSCR3K7ERE1 68 aa7.94□□□□□ -1.14
SCAF1-202ENST00000595242 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
SCAF1-202ENST00000595242 PKIGQ9Y2B9 76 aa7.94□□□□□ -1.14
SCAF1-202ENST00000595242 PRYO14603 147 aa7.93□□□□□ -1.14
SCAF1-202ENST00000595242 ACYP1P07311 99 aa7.93□□□□□ -1.14
SCAF1-202ENST00000595242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.93□□□□□ -1.14
SCAF1-202ENST00000595242 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
SCAF1-202ENST00000595242 SPRR1AP35321 89 aa7.92□□□□□ -1.14
SCAF1-202ENST00000595242 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
SCAF1-202ENST00000595242 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
SCAF1-202ENST00000595242 SIGMAR1Q99720 223 aa7.92□□□□□ -1.14
SCAF1-202ENST00000595242 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
SCAF1-202ENST00000595242 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
SCAF1-202ENST00000595242 A0A096LNI7 61 aa7.9□□□□□ -1.14
SCAF1-202ENST00000595242 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
SCAF1-202ENST00000595242 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms