RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF73O43830 326 aaPredicted RBP13.13□□□□□ -0.31
PNKP-203ENST00000593946 FAM218AQ96MZ4 157 aa13.13□□□□□ -0.31
PNKP-203ENST00000593946 PKD1P98161 4303 aa13.13□□□□□ -0.31
PNKP-203ENST00000593946 LINC00336Q6ZUF6 198 aa13.13□□□□□ -0.31
PNKP-203ENST00000593946 DIRC1Q969H9 104 aa13.13□□□□□ -0.31
PNKP-203ENST00000593946 RPL37AP8A6NKH3 93 aa13.12□□□□□ -0.31
PNKP-203ENST00000593946 EPM2AB3EWF7 344 aa13.11□□□□□ -0.31
PNKP-203ENST00000593946 RYR2Q92736 4967 aa13.11□□□□□ -0.31
PNKP-203ENST00000593946 PRYO14603 147 aa13.09□□□□□ -0.31
PNKP-203ENST00000593946 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
PNKP-203ENST00000593946 DPH3Q96FX2 82 aa13.08□□□□□ -0.32
PNKP-203ENST00000593946 A0A087WYN8 130 aa13.08□□□□□ -0.32
PNKP-203ENST00000593946 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
PNKP-203ENST00000593946 TRACP01848 142 aa13.07□□□□□ -0.32
PNKP-203ENST00000593946 PHF5AQ7RTV0 110 aaKnown RBP13.07□□□□□ -0.32
PNKP-203ENST00000593946 PRO0461Q9UI25 63 aa13.07□□□□□ -0.32
PNKP-203ENST00000593946 ELOF1P60002 83 aaKnown RBP13.06□□□□□ -0.32
PNKP-203ENST00000593946 SPRR1AP35321 89 aa13.05□□□□□ -0.32
PNKP-203ENST00000593946 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
PNKP-203ENST00000593946 J3QR89 54 aa13.05□□□□□ -0.32
PNKP-203ENST00000593946 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
PNKP-203ENST00000593946 C9JAW5 83 aa13.04□□□□□ -0.32
PNKP-203ENST00000593946 KRTAP4-16G5E9R7 235 aaPredicted RBP13.04□□□□□ -0.32
PNKP-203ENST00000593946 COX7BP24311 80 aa13.04□□□□□ -0.32
PNKP-203ENST00000593946 LINC00575Q6W349 94 aa13.04□□□□□ -0.32
PNKP-203ENST00000593946 A0A1B0GX51 115 aa13.03□□□□□ -0.32
PNKP-203ENST00000593946 F8W1H4 67 aa13.03□□□□□ -0.32
PNKP-203ENST00000593946 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
PNKP-203ENST00000593946 KRTAP10-1P60331 282 aa13.01□□□□□ -0.33
PNKP-203ENST00000593946 LINC00528Q8N1L1 170 aa13.01□□□□□ -0.33
PNKP-203ENST00000593946 SMCPP49901 116 aaPredicted RBP13□□□□□ -0.33
PNKP-203ENST00000593946 UBE2BP63146 152 aa13□□□□□ -0.33
PNKP-203ENST00000593946 Q6ZSA8 131 aa13□□□□□ -0.33
PNKP-203ENST00000593946 KRTAP11-1Q8IUC1 163 aa13□□□□□ -0.33
PNKP-203ENST00000593946 A0A1B0GVY2 172 aa12.99□□□□□ -0.33
PNKP-203ENST00000593946 FAM30AQ9NZY2 134 aa12.99□□□□□ -0.33
PNKP-203ENST00000593946 SLC25A20O43772 301 aa12.99□□□□□ -0.33
PNKP-203ENST00000593946 DNAL4O96015 105 aa12.99□□□□□ -0.33
PNKP-203ENST00000593946 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
PNKP-203ENST00000593946 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
PNKP-203ENST00000593946 B5MCH6 92 aa12.97□□□□□ -0.33
PNKP-203ENST00000593946 SCGB1A1P11684 91 aa12.97□□□□□ -0.33
PNKP-203ENST00000593946 Q6ZRX8 168 aa12.97□□□□□ -0.33
PNKP-203ENST00000593946 SNCGO76070 127 aa12.96□□□□□ -0.33
PNKP-203ENST00000593946 LINC01600Q96MT4 127 aa12.96□□□□□ -0.34
PNKP-203ENST00000593946 PKHD1P08F94 4074 aa12.95□□□□□ -0.34
PNKP-203ENST00000593946 H3BT86 120 aa12.94□□□□□ -0.34
PNKP-203ENST00000593946 ANKRD29Q8N6D5 301 aa12.94□□□□□ -0.34
PNKP-203ENST00000593946 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
PNKP-203ENST00000593946 DNAH8Q96JB1 4490 aa12.93□□□□□ -0.34
PNKP-203ENST00000593946 INAFM2P0DMQ5 153 aa12.92□□□□□ -0.34
PNKP-203ENST00000593946 Q9BRP9 147 aa12.91□□□□□ -0.34
PNKP-203ENST00000593946 BAALC-AS2P0C853 105 aa12.91□□□□□ -0.34
PNKP-203ENST00000593946 SCXQ7RTU7 201 aa12.91□□□□□ -0.34
PNKP-203ENST00000593946 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
PNKP-203ENST00000593946 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
PNKP-203ENST00000593946 Q6ZQY7 126 aa12.89□□□□□ -0.35
PNKP-203ENST00000593946 FAM19A1Q7Z5A9 133 aa12.89□□□□□ -0.35
PNKP-203ENST00000593946 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
PNKP-203ENST00000593946 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.88□□□□□ -0.35
PNKP-203ENST00000593946 SIGMAR1Q99720 223 aa12.87□□□□□ -0.35
PNKP-203ENST00000593946 H0Y9J4 135 aa12.86□□□□□ -0.35
PNKP-203ENST00000593946 BCE1O60756 84 aa12.86□□□□□ -0.35
PNKP-203ENST00000593946 PRLHP81277 87 aa12.86□□□□□ -0.35
PNKP-203ENST00000593946 RYR3Q15413 4870 aa12.85□□□□□ -0.35
PNKP-203ENST00000593946 TEN1Q86WV5 123 aa12.85□□□□□ -0.35
PNKP-203ENST00000593946 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
PNKP-203ENST00000593946 PSORS1C2Q9UIG4 136 aa12.85□□□□□ -0.35
PNKP-203ENST00000593946 HAMPP81172 84 aa12.82□□□□□ -0.36
PNKP-203ENST00000593946 KRTAP13-1Q8IUC0 172 aa12.82□□□□□ -0.36
PNKP-203ENST00000593946 TMEM256-PLSCR3K7ERE1 68 aa12.82□□□□□ -0.36
PNKP-203ENST00000593946 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
PNKP-203ENST00000593946 UBE2AP49459 152 aa12.8□□□□□ -0.36
PNKP-203ENST00000593946 LRP1BQ9NZR2 4599 aa12.8□□□□□ -0.36
PNKP-203ENST00000593946 H3BQ85 93 aa12.79□□□□□ -0.36
PNKP-203ENST00000593946 SRRM2Q9UQ35 2752 aaKnown RBP12.78□□□□□ -0.36
PNKP-203ENST00000593946 GHRHP01286 108 aa12.78□□□□□ -0.36
PNKP-203ENST00000593946 HIGD2AQ9BW72 106 aa12.78□□□□□ -0.36
PNKP-203ENST00000593946 C1orf137Q5JT78 98 aa12.77□□□□□ -0.36
PNKP-203ENST00000593946 TEX49A0A1B0GTD5 131 aa12.76□□□□□ -0.37
PNKP-203ENST00000593946 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
PNKP-203ENST00000593946 LINC01547P58512 204 aaPredicted RBP12.76□□□□□ -0.37
PNKP-203ENST00000593946 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
PNKP-203ENST00000593946 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
PNKP-203ENST00000593946 PPDPFLQ8WWR9 84 aa12.74□□□□□ -0.37
PNKP-203ENST00000593946 Q8N377 158 aa12.73□□□□□ -0.37
PNKP-203ENST00000593946 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
PNKP-203ENST00000593946 A0A1B0GV72 72 aa12.72□□□□□ -0.37
PNKP-203ENST00000593946 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
PNKP-203ENST00000593946 XGP55808 180 aa12.71□□□□□ -0.38
PNKP-203ENST00000593946 ZNF861PO60384 105 aa12.69□□□□□ -0.38
PNKP-203ENST00000593946 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
PNKP-203ENST00000593946 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
PNKP-203ENST00000593946 JMJD7-PLA2G4BH0Y9G9 81 aa12.68□□□□□ -0.38
PNKP-203ENST00000593946 NDUFV3P56181 108 aaKnown RBP12.67□□□□□ -0.38
PNKP-203ENST00000593946 C14orf132Q9NPU4 83 aa12.63□□□□□ -0.39
PNKP-203ENST00000593946 C3orf22Q8N5N4 141 aa12.62□□□□□ -0.39
PNKP-203ENST00000593946 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
PNKP-203ENST00000593946 SPRR1BP22528 89 aa12.62□□□□□ -0.39
PNKP-203ENST00000593946 RBM3P98179 157 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms