RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NPC2P61916 151 aa8.94□□□□□ -0.98
LIG1-205ENST00000593425 MT1HP80294 61 aa8.94□□□□□ -0.98
LIG1-205ENST00000593425 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
LIG1-205ENST00000593425 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
LIG1-205ENST00000593425 LINC00310P59036 64 aa8.93□□□□□ -0.98
LIG1-205ENST00000593425 PLNP26678 52 aa8.92□□□□□ -0.98
LIG1-205ENST00000593425 NMUP48645 174 aa8.92□□□□□ -0.98
LIG1-205ENST00000593425 NDUFA5Q16718 116 aa8.92□□□□□ -0.98
LIG1-205ENST00000593425 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
LIG1-205ENST00000593425 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
LIG1-205ENST00000593425 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
LIG1-205ENST00000593425 SERF1AO75920 110 aa8.9□□□□□ -0.98
LIG1-205ENST00000593425 HERVK_113P61574 105 aa8.9□□□□□ -0.98
LIG1-205ENST00000593425 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
LIG1-205ENST00000593425 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
LIG1-205ENST00000593425 C9orf92A6NGG3 77 aa8.89□□□□□ -0.99
LIG1-205ENST00000593425 DPM2O94777 84 aa8.89□□□□□ -0.99
LIG1-205ENST00000593425 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 IGKCP01834 107 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 SPRR1BP22528 89 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
LIG1-205ENST00000593425 TRGC2P03986 189 aa8.87□□□□□ -0.99
LIG1-205ENST00000593425 FABP4P15090 132 aa8.86□□□□□ -0.99
LIG1-205ENST00000593425 HSPB8Q9UJY1 196 aa8.85□□□□□ -0.99
LIG1-205ENST00000593425 HINT1P49773 126 aaPredicted RBP8.84□□□□□ -0.99
LIG1-205ENST00000593425 CFC1BP0CG36 223 aa8.83□□□□□ -1
LIG1-205ENST00000593425 E9PLD3 99 aa8.82□□□□□ -1
LIG1-205ENST00000593425 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
LIG1-205ENST00000593425 SLC25A34Q6PIV7 304 aa8.82□□□□□ -1
LIG1-205ENST00000593425 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
LIG1-205ENST00000593425 LITAFQ99732 161 aa8.82□□□□□ -1
LIG1-205ENST00000593425 CBY1Q9Y3M2 126 aa8.82□□□□□ -1
LIG1-205ENST00000593425 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
LIG1-205ENST00000593425 SPANXCQ9NY87 97 aa8.81□□□□□ -1
LIG1-205ENST00000593425 DHRS4-AS1Q9P1J3 65 aa8.81□□□□□ -1
LIG1-205ENST00000593425 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
LIG1-205ENST00000593425 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
LIG1-205ENST00000593425 Q1RN00 199 aa8.79□□□□□ -1
LIG1-205ENST00000593425 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
LIG1-205ENST00000593425 H7C2G1 150 aa8.77□□□□□ -1.01
LIG1-205ENST00000593425 CD164Q04900 197 aa8.77□□□□□ -1.01
LIG1-205ENST00000593425 COX7BP24311 80 aa8.76□□□□□ -1.01
LIG1-205ENST00000593425 C6orf99Q4VX62 202 aa8.76□□□□□ -1.01
LIG1-205ENST00000593425 SPANXDQ9BXN6 97 aa8.76□□□□□ -1.01
LIG1-205ENST00000593425 DEFB105AQ8NG35 78 aa8.75□□□□□ -1.01
LIG1-205ENST00000593425 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
LIG1-205ENST00000593425 TIMM17BO60830 172 aa8.74□□□□□ -1.01
LIG1-205ENST00000593425 TAL2Q16559 108 aa8.74□□□□□ -1.01
LIG1-205ENST00000593425 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
LIG1-205ENST00000593425 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
LIG1-205ENST00000593425 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
LIG1-205ENST00000593425 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
LIG1-205ENST00000593425 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
LIG1-205ENST00000593425 Q5XG85 94 aa8.72□□□□□ -1.01
LIG1-205ENST00000593425 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
LIG1-205ENST00000593425 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
LIG1-205ENST00000593425 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
LIG1-205ENST00000593425 M0R2T5 61 aa8.7□□□□□ -1.02
LIG1-205ENST00000593425 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
LIG1-205ENST00000593425 AKR1D1P51857 326 aa8.69□□□□□ -1.02
LIG1-205ENST00000593425 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
LIG1-205ENST00000593425 COLCA2A8K830 154 aa8.68□□□□□ -1.02
LIG1-205ENST00000593425 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
LIG1-205ENST00000593425 LINC01545Q5VT33 79 aa8.67□□□□□ -1.02
LIG1-205ENST00000593425 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
LIG1-205ENST00000593425 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
LIG1-205ENST00000593425 A0A1B0GWB2 263 aa8.64□□□□□ -1.03
LIG1-205ENST00000593425 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
LIG1-205ENST00000593425 A6NDN8 102 aa8.59□□□□□ -1.03
LIG1-205ENST00000593425 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
LIG1-205ENST00000593425 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
LIG1-205ENST00000593425 TCL1BO95988 128 aa8.57□□□□□ -1.04
LIG1-205ENST00000593425 IFITM1P13164 125 aa8.56□□□□□ -1.04
LIG1-205ENST00000593425 A4D1N5 150 aa8.55□□□□□ -1.04
LIG1-205ENST00000593425 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
LIG1-205ENST00000593425 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
LIG1-205ENST00000593425 SLC7A5P1Q8MH63 180 aa8.55□□□□□ -1.04
LIG1-205ENST00000593425 SMIM11BQ8TCY0 68 aa8.54□□□□□ -1.04
LIG1-205ENST00000593425 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
LIG1-205ENST00000593425 NHP2Q9NX24 153 aaKnown RBP8.54□□□□□ -1.04
LIG1-205ENST00000593425 KRTDAPP60985 99 aa8.52□□□□□ -1.05
LIG1-205ENST00000593425 Q6ZVH6 145 aa8.51□□□□□ -1.05
LIG1-205ENST00000593425 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
LIG1-205ENST00000593425 F8WEM9 126 aa8.5□□□□□ -1.05
LIG1-205ENST00000593425 Q6Q795 121 aa8.5□□□□□ -1.05
LIG1-205ENST00000593425 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
LIG1-205ENST00000593425 ATOH7Q8N100 152 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1580.6 ms