RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 HSPB8Q9UJY1 196 aa11.43□□□□□ -0.58
TRIM47-207ENST00000593089 SLC25A20O43772 301 aa11.42□□□□□ -0.58
TRIM47-207ENST00000593089 IGKCP01834 107 aa11.42□□□□□ -0.58
TRIM47-207ENST00000593089 C9orf153Q5TBE3 101 aa11.42□□□□□ -0.58
TRIM47-207ENST00000593089 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
TRIM47-207ENST00000593089 SOSTDC1Q6X4U4 206 aa11.4□□□□□ -0.58
TRIM47-207ENST00000593089 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
TRIM47-207ENST00000593089 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
TRIM47-207ENST00000593089 ZNF73O43830 326 aaPredicted RBP11.38□□□□□ -0.59
TRIM47-207ENST00000593089 LINC01547P58512 204 aaPredicted RBP11.38□□□□□ -0.59
TRIM47-207ENST00000593089 ST20-AS1Q8NBB2 130 aa11.38□□□□□ -0.59
TRIM47-207ENST00000593089 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
TRIM47-207ENST00000593089 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
TRIM47-207ENST00000593089 XP32Q5T750 250 aa11.33□□□□□ -0.6
TRIM47-207ENST00000593089 E9PLD3 99 aa11.32□□□□□ -0.6
TRIM47-207ENST00000593089 S100A1P23297 94 aa11.32□□□□□ -0.6
TRIM47-207ENST00000593089 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
TRIM47-207ENST00000593089 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
TRIM47-207ENST00000593089 CBY1Q9Y3M2 126 aa11.29□□□□□ -0.6
TRIM47-207ENST00000593089 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
TRIM47-207ENST00000593089 LINC00308Q8TCZ7 52 aa11.28□□□□□ -0.6
TRIM47-207ENST00000593089 HRCT1Q6UXD1 115 aa11.27□□□□□ -0.61
TRIM47-207ENST00000593089 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
TRIM47-207ENST00000593089 COLCA2A8K830 154 aa11.26□□□□□ -0.61
TRIM47-207ENST00000593089 LITAFQ99732 161 aa11.26□□□□□ -0.61
TRIM47-207ENST00000593089 SPRR1BP22528 89 aa11.25□□□□□ -0.61
TRIM47-207ENST00000593089 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
TRIM47-207ENST00000593089 LIMD2Q9BT23 127 aa11.24□□□□□ -0.61
TRIM47-207ENST00000593089 DHRS4-AS1Q9P1J3 65 aa11.24□□□□□ -0.61
TRIM47-207ENST00000593089 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
TRIM47-207ENST00000593089 TIMM17BO60830 172 aa11.21□□□□□ -0.61
TRIM47-207ENST00000593089 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.61
TRIM47-207ENST00000593089 LAMTOR3Q9UHA4 124 aa11.21□□□□□ -0.61
TRIM47-207ENST00000593089 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
TRIM47-207ENST00000593089 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
TRIM47-207ENST00000593089 COX7BP24311 80 aa11.19□□□□□ -0.62
TRIM47-207ENST00000593089 ELOF1P60002 83 aaKnown RBP11.18□□□□□ -0.62
TRIM47-207ENST00000593089 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
TRIM47-207ENST00000593089 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
TRIM47-207ENST00000593089 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
TRIM47-207ENST00000593089 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
TRIM47-207ENST00000593089 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
TRIM47-207ENST00000593089 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
TRIM47-207ENST00000593089 DEFB105AQ8NG35 78 aa11.17□□□□□ -0.62
TRIM47-207ENST00000593089 TAL2Q16559 108 aa11.16□□□□□ -0.62
TRIM47-207ENST00000593089 Q1RN00 199 aa11.16□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BKO60814 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BJP06899 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BOP23527 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BBP33778 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BDP58876 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BCP62807 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
TRIM47-207ENST00000593089 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 LINC00518Q8N0U6 118 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.62
TRIM47-207ENST00000593089 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
TRIM47-207ENST00000593089 H7C2G1 150 aa11.12□□□□□ -0.63
TRIM47-207ENST00000593089 PRO1933Q9H354 126 aa11.12□□□□□ -0.63
TRIM47-207ENST00000593089 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
TRIM47-207ENST00000593089 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
TRIM47-207ENST00000593089 CD164Q04900 197 aa11.1□□□□□ -0.63
TRIM47-207ENST00000593089 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
TRIM47-207ENST00000593089 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
TRIM47-207ENST00000593089 TRBV7-6A0A0J9YX20 115 aa11.06□□□□□ -0.64
TRIM47-207ENST00000593089 MT1HP80294 61 aa11.06□□□□□ -0.64
TRIM47-207ENST00000593089 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
TRIM47-207ENST00000593089 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
TRIM47-207ENST00000593089 AKR1D1P51857 326 aa11.05□□□□□ -0.64
TRIM47-207ENST00000593089 KRTDAPP60985 99 aa11.05□□□□□ -0.64
TRIM47-207ENST00000593089 FSIP2Q5CZC0 6907 aa11.05□□□□□ -0.64
TRIM47-207ENST00000593089 A0A0G2JQZ4 141 aa11.04□□□□□ -0.64
TRIM47-207ENST00000593089 A6NDN8 102 aa11.04□□□□□ -0.64
TRIM47-207ENST00000593089 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
TRIM47-207ENST00000593089 Q5XG85 94 aa11.02□□□□□ -0.65
TRIM47-207ENST00000593089 COPS9Q8WXC6 57 aa11.02□□□□□ -0.65
TRIM47-207ENST00000593089 IGLV5-48A0A075B6I7 105 aa11.01□□□□□ -0.65
TRIM47-207ENST00000593089 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
TRIM47-207ENST00000593089 CRCT1Q9UGL9 99 aa11.01□□□□□ -0.65
TRIM47-207ENST00000593089 IFITM1P13164 125 aa11□□□□□ -0.65
TRIM47-207ENST00000593089 MUSTN1Q8IVN3 82 aa10.99□□□□□ -0.65
TRIM47-207ENST00000593089 C20orf202A1L168 122 aa10.97□□□□□ -0.65
TRIM47-207ENST00000593089 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
TRIM47-207ENST00000593089 Q6ZVH6 145 aa10.97□□□□□ -0.65
TRIM47-207ENST00000593089 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
TRIM47-207ENST00000593089 A4D1N5 150 aa10.95□□□□□ -0.66
TRIM47-207ENST00000593089 PCP2Q8IVA1 136 aa10.95□□□□□ -0.66
TRIM47-207ENST00000593089 RPL37P61927 97 aaKnown RBP10.94□□□□□ -0.66
TRIM47-207ENST00000593089 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
TRIM47-207ENST00000593089 SMIM11BQ8TCY0 68 aa10.94□□□□□ -0.66
TRIM47-207ENST00000593089 NHP2Q9NX24 153 aaKnown RBP10.94□□□□□ -0.66
TRIM47-207ENST00000593089 TRAV13-2A0A0B4J235 113 aa10.92□□□□□ -0.66
TRIM47-207ENST00000593089 TCL1BO95988 128 aa10.9□□□□□ -0.66
TRIM47-207ENST00000593089 F8WEM9 126 aa10.88□□□□□ -0.67
TRIM47-207ENST00000593089 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
TRIM47-207ENST00000593089 KRTAP10-6P60371 365 aaPredicted RBP10.88□□□□□ -0.67
TRIM47-207ENST00000593089 M0R2T5 61 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms