RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
VPS4B-205ENST00000591383 COX8AP10176 69 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 SOSTDC1Q6X4U4 206 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 KRTAP11-1Q8IUC1 163 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 C14orf144Q96I85 54 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
VPS4B-205ENST00000591383 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
VPS4B-205ENST00000591383 FLG2Q5D862 2391 aaPredicted RBP3.96□□□□□ -1.78
VPS4B-205ENST00000591383 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
VPS4B-205ENST00000591383 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
VPS4B-205ENST00000591383 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
VPS4B-205ENST00000591383 LINC00167Q96N53 147 aa3.95□□□□□ -1.78
VPS4B-205ENST00000591383 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 M0R378 163 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 SMIM6P0DI80 62 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 INAFM2P0DMQ5 153 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 UBE2AP49459 152 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 HNRNPA3P51991 378 aaKnown RBP3.94□□□□□ -1.78
VPS4B-205ENST00000591383 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
VPS4B-205ENST00000591383 S100A12P80511 92 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 S100A7L2Q5SY68 101 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
VPS4B-205ENST00000591383 TRBV10-3A0A0K0K1G6 114 aa3.93□□□□□ -1.78
VPS4B-205ENST00000591383 DDTP30046 118 aa3.93□□□□□ -1.78
VPS4B-205ENST00000591383 OR13C6PQ8NH95 151 aa3.93□□□□□ -1.78
VPS4B-205ENST00000591383 C12orf57Q99622 126 aa3.93□□□□□ -1.78
VPS4B-205ENST00000591383 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
VPS4B-205ENST00000591383 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 IGKV2D-30A0A075B6S6 120 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 ETDCA0A1B0GVM5 59 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 BCE1O60756 84 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 NDUFC2O95298 119 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 IGLV7-43P04211 117 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 IFITM1P13164 125 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 PRLHP81277 87 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 REG3GQ6UW15 175 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 Q6ZVH6 145 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 FAM19A1Q7Z5A9 133 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 MUSTN1Q8IVN3 82 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
VPS4B-205ENST00000591383 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
VPS4B-205ENST00000591383 TRAV23DV6A0A075B6W5 121 aa3.91□□□□□ -1.78
VPS4B-205ENST00000591383 DLEU1O43261 78 aa3.91□□□□□ -1.78
VPS4B-205ENST00000591383 C2orf91Q6ZV80 131 aa3.91□□□□□ -1.78
VPS4B-205ENST00000591383 PRO1933Q9H354 126 aa3.91□□□□□ -1.78
VPS4B-205ENST00000591383 A0A087X002 238 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 LOC105371267A0A1B0GV96 52 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 A6NDN8 102 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 RPL28P46779 137 aaKnown RBP3.9□□□□□ -1.79
VPS4B-205ENST00000591383 LINC00337Q8N6G1 96 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 DIRC1Q969H9 104 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.79
VPS4B-205ENST00000591383 H0Y9J4 135 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
VPS4B-205ENST00000591383 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 HIGD2AQ9BW72 106 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 HIGD1BQ9P298 99 aa3.89□□□□□ -1.79
VPS4B-205ENST00000591383 TRAV13-2A0A0B4J235 113 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 ZNF73O43830 326 aaPredicted RBP3.88□□□□□ -1.79
VPS4B-205ENST00000591383 ZNF861PO60384 105 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 HSD52Q0P140 79 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 PPDPFQ9H3Y8 114 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 KCNQ1DNQ9H478 68 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 CBY1Q9Y3M2 126 aa3.88□□□□□ -1.79
VPS4B-205ENST00000591383 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
VPS4B-205ENST00000591383 H7C2G1 150 aa3.87□□□□□ -1.79
VPS4B-205ENST00000591383 Q1RN00 199 aa3.87□□□□□ -1.79
VPS4B-205ENST00000591383 KRTAP13-1Q8IUC0 172 aa3.87□□□□□ -1.79
VPS4B-205ENST00000591383 CEND1Q8N111 149 aa3.87□□□□□ -1.79
VPS4B-205ENST00000591383 RAB37Q96AX2 223 aa3.87□□□□□ -1.79
VPS4B-205ENST00000591383 PCP4L1A6NKN8 68 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 TSTD3H0UI37 97 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 SPRR1AP35321 89 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 HINT1P49773 126 aaPredicted RBP3.86□□□□□ -1.79
VPS4B-205ENST00000591383 FXYD2P54710 66 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 TAL2Q16559 108 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 Q6ZRX8 168 aa3.86□□□□□ -1.79
VPS4B-205ENST00000591383 K7ERJ3 54 aa3.85□□□□□ -1.79
VPS4B-205ENST00000591383 COX7BP24311 80 aa3.85□□□□□ -1.79
VPS4B-205ENST00000591383 NDUFV3P56181 108 aaKnown RBP3.85□□□□□ -1.79
VPS4B-205ENST00000591383 SMIM11BQ8TCY0 68 aa3.85□□□□□ -1.79
VPS4B-205ENST00000591383 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
VPS4B-205ENST00000591383 TNXBP22105 4242 aa3.84□□□□□ -1.79
VPS4B-205ENST00000591383 A0A0B4J2C4 111 aa3.84□□□□□ -1.79
VPS4B-205ENST00000591383 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
VPS4B-205ENST00000591383 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.79
VPS4B-205ENST00000591383 Q9BRP9 147 aa3.84□□□□□ -1.79
VPS4B-205ENST00000591383 ZNF706Q9Y5V0 76 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms