RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
RETREG3-210ENST00000590541 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
RETREG3-210ENST00000590541 S100A7L2Q5SY68 101 aa9.81□□□□□ -0.84
RETREG3-210ENST00000590541 LINC01545Q5VT33 79 aa9.81□□□□□ -0.84
RETREG3-210ENST00000590541 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
RETREG3-210ENST00000590541 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
RETREG3-210ENST00000590541 C3orf22Q8N5N4 141 aa9.81□□□□□ -0.84
RETREG3-210ENST00000590541 B5MCH6 92 aa9.8□□□□□ -0.84
RETREG3-210ENST00000590541 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
RETREG3-210ENST00000590541 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
RETREG3-210ENST00000590541 Q6ZRX8 168 aa9.78□□□□□ -0.84
RETREG3-210ENST00000590541 TIMM17BO60830 172 aa9.77□□□□□ -0.85
RETREG3-210ENST00000590541 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
RETREG3-210ENST00000590541 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
RETREG3-210ENST00000590541 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
RETREG3-210ENST00000590541 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
RETREG3-210ENST00000590541 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
RETREG3-210ENST00000590541 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
RETREG3-210ENST00000590541 SEC61BP60468 96 aaKnown RBP9.75□□□□□ -0.85
RETREG3-210ENST00000590541 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
RETREG3-210ENST00000590541 SPANXCQ9NY87 97 aa9.74□□□□□ -0.85
RETREG3-210ENST00000590541 C3orf79P0CE67 100 aa9.73□□□□□ -0.85
RETREG3-210ENST00000590541 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
RETREG3-210ENST00000590541 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
RETREG3-210ENST00000590541 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
RETREG3-210ENST00000590541 C5orf52A6NGY3 159 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 ZNF73O43830 326 aaPredicted RBP9.72□□□□□ -0.85
RETREG3-210ENST00000590541 SPINK1P00995 79 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 AKR1D1P51857 326 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 NPC2P61916 151 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 GAGE2AQ6NT46 116 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 LITAFQ99732 161 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 Q9BRP9 147 aa9.72□□□□□ -0.85
RETREG3-210ENST00000590541 C20orf202A1L168 122 aa9.71□□□□□ -0.86
RETREG3-210ENST00000590541 SSBP3-AS1Q7Z2R9 100 aa9.71□□□□□ -0.86
RETREG3-210ENST00000590541 Q8NBF4 154 aa9.71□□□□□ -0.86
RETREG3-210ENST00000590541 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
RETREG3-210ENST00000590541 ERC2-IT1O76042 136 aa9.7□□□□□ -0.86
RETREG3-210ENST00000590541 KRTDAPP60985 99 aa9.69□□□□□ -0.86
RETREG3-210ENST00000590541 LINC00518Q8N0U6 118 aa9.69□□□□□ -0.86
RETREG3-210ENST00000590541 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
RETREG3-210ENST00000590541 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
RETREG3-210ENST00000590541 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
RETREG3-210ENST00000590541 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
RETREG3-210ENST00000590541 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
RETREG3-210ENST00000590541 MT1HP80294 61 aa9.66□□□□□ -0.86
RETREG3-210ENST00000590541 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.86
RETREG3-210ENST00000590541 MOBPQ13875 183 aa9.65□□□□□ -0.86
RETREG3-210ENST00000590541 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
RETREG3-210ENST00000590541 DHRS4-AS1Q9P1J3 65 aa9.64□□□□□ -0.87
RETREG3-210ENST00000590541 Q6ZVH6 145 aa9.63□□□□□ -0.87
RETREG3-210ENST00000590541 IFITM1P13164 125 aa9.62□□□□□ -0.87
RETREG3-210ENST00000590541 SNRPEP62304 92 aaKnown RBP9.62□□□□□ -0.87
RETREG3-210ENST00000590541 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
RETREG3-210ENST00000590541 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
RETREG3-210ENST00000590541 XP32Q5T750 250 aa9.61□□□□□ -0.87
RETREG3-210ENST00000590541 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
RETREG3-210ENST00000590541 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
RETREG3-210ENST00000590541 TRBV7-6A0A0J9YX20 115 aa9.58□□□□□ -0.88
RETREG3-210ENST00000590541 SLC25A20O43772 301 aa9.58□□□□□ -0.88
RETREG3-210ENST00000590541 SPRR1BP22528 89 aa9.58□□□□□ -0.88
RETREG3-210ENST00000590541 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
RETREG3-210ENST00000590541 ANKRD39Q53RE8 183 aa9.58□□□□□ -0.88
RETREG3-210ENST00000590541 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
RETREG3-210ENST00000590541 COX7BP24311 80 aa9.57□□□□□ -0.88
RETREG3-210ENST00000590541 ST20-AS1Q8NBB2 130 aa9.57□□□□□ -0.88
RETREG3-210ENST00000590541 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
RETREG3-210ENST00000590541 Q8N377 158 aa9.56□□□□□ -0.88
RETREG3-210ENST00000590541 S100A1P23297 94 aa9.55□□□□□ -0.88
RETREG3-210ENST00000590541 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
RETREG3-210ENST00000590541 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
RETREG3-210ENST00000590541 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
RETREG3-210ENST00000590541 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
RETREG3-210ENST00000590541 S100A2P29034 98 aa9.53□□□□□ -0.88
RETREG3-210ENST00000590541 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
RETREG3-210ENST00000590541 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
RETREG3-210ENST00000590541 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
RETREG3-210ENST00000590541 A4D1N5 150 aa9.51□□□□□ -0.89
RETREG3-210ENST00000590541 A6NDN8 102 aa9.51□□□□□ -0.89
RETREG3-210ENST00000590541 HIST3H2BBQ8N257 126 aa9.51□□□□□ -0.89
RETREG3-210ENST00000590541 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
RETREG3-210ENST00000590541 TAL2Q16559 108 aa9.5□□□□□ -0.89
RETREG3-210ENST00000590541 HIST1H2BLQ99880 126 aa9.5□□□□□ -0.89
RETREG3-210ENST00000590541 TEX49A0A1B0GTD5 131 aa9.49□□□□□ -0.89
RETREG3-210ENST00000590541 LIMD2Q9BT23 127 aa9.49□□□□□ -0.89
RETREG3-210ENST00000590541 S100A6P06703 90 aa9.48□□□□□ -0.89
RETREG3-210ENST00000590541 KRTAP9-7A8MTY7 169 aa9.47□□□□□ -0.89
RETREG3-210ENST00000590541 NHP2Q9NX24 153 aaKnown RBP9.47□□□□□ -0.89
RETREG3-210ENST00000590541 CD164Q04900 197 aa9.46□□□□□ -0.9
RETREG3-210ENST00000590541 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
RETREG3-210ENST00000590541 DEFB105AQ8NG35 78 aa9.45□□□□□ -0.9
RETREG3-210ENST00000590541 PRO1933Q9H354 126 aa9.45□□□□□ -0.9
RETREG3-210ENST00000590541 IGLV8-61A0A075B6I0 122 aa9.44□□□□□ -0.9
RETREG3-210ENST00000590541 IGLV5-48A0A075B6I7 105 aa9.43□□□□□ -0.9
RETREG3-210ENST00000590541 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
RETREG3-210ENST00000590541 VAMP3Q15836 100 aa9.43□□□□□ -0.9
RETREG3-210ENST00000590541 Q1RN00 199 aa9.42□□□□□ -0.9
RETREG3-210ENST00000590541 SMIM11BQ8TCY0 68 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms