RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 KRTDAPP60985 99 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
SDF2-205ENST00000587629 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 SPATA45Q537H7 98 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 C18orf32Q8TCD1 76 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 PPDPFQ9H3Y8 114 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
SDF2-205ENST00000587629 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 A0A0U1RRA0 63 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 C3orf79P0CE67 100 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 ZNF22P17026 224 aaPredicted RBP3.67□□□□□ -1.82
SDF2-205ENST00000587629 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 PAM16Q9Y3D7 125 aa3.67□□□□□ -1.82
SDF2-205ENST00000587629 A0A096LNJ9 63 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 C11orf86A6NJI1 115 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 LINC00158P58513 81 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 TMEM170BQ5T4T1 132 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 DAND5Q8N907 189 aa3.66□□□□□ -1.82
SDF2-205ENST00000587629 COX17Q14061 63 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 SLC25A34Q6PIV7 304 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 LINC00337Q8N6G1 96 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 Q8NBF4 154 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 URB1-AS1Q96HZ7 61 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 SPRR4Q96PI1 79 aa3.65□□□□□ -1.83
SDF2-205ENST00000587629 SYS1-DBNDD2H3BUS1 97 aa3.64□□□□□ -1.83
SDF2-205ENST00000587629 NCR3O14931 201 aa3.64□□□□□ -1.83
SDF2-205ENST00000587629 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
SDF2-205ENST00000587629 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
SDF2-205ENST00000587629 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
SDF2-205ENST00000587629 HBDP02042 147 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 LINC01545Q5VT33 79 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 FAM19A2Q8N3H0 131 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 SMCR5Q8TEV8 140 aa3.63□□□□□ -1.83
SDF2-205ENST00000587629 CHTOPQ9Y3Y2 248 aaKnown RBP3.63□□□□□ -1.83
SDF2-205ENST00000587629 A6NDN8 102 aa3.62□□□□□ -1.83
SDF2-205ENST00000587629 BATFQ16520 125 aa3.62□□□□□ -1.83
SDF2-205ENST00000587629 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
SDF2-205ENST00000587629 FP248Q71RG6 208 aaPredicted RBP3.62□□□□□ -1.83
SDF2-205ENST00000587629 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
SDF2-205ENST00000587629 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
SDF2-205ENST00000587629 IGLV9-49A0A0B4J1Y8 123 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 TMEM223A0PJW6 202 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 PRYO14603 147 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 COX8AP10176 69 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 MEIG1Q5JSS6 88 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 GAGE2AQ6NT46 116 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 GTF2H5Q6ZYL4 71 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 MIR7-3HGQ8N6C7 128 aa3.61□□□□□ -1.83
SDF2-205ENST00000587629 TRBV10-3A0A0K0K1G6 114 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 K7ERU9 68 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 SPINK1P00995 79 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 HINT1P49773 126 aaPredicted RBP3.6□□□□□ -1.83
SDF2-205ENST00000587629 LINC01547P58512 204 aaPredicted RBP3.6□□□□□ -1.83
SDF2-205ENST00000587629 MOBPQ13875 183 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 KCNQ1DNQ9H478 68 aa3.6□□□□□ -1.83
SDF2-205ENST00000587629 KRTAP4-16G5E9R7 235 aaPredicted RBP3.59□□□□□ -1.83
SDF2-205ENST00000587629 H0Y8G0 127 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 SPRR1AP35321 89 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 HSD52Q0P140 79 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 VAMP3Q15836 100 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 BVES-AS1Q5T3Y7 98 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 IFI27L1Q96BM0 104 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 HIGD1BQ9P298 99 aa3.59□□□□□ -1.83
SDF2-205ENST00000587629 B5MCH6 92 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 SEC61BP60468 96 aaKnown RBP3.58□□□□□ -1.84
SDF2-205ENST00000587629 TAL2Q16559 108 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 ANKRD39Q53RE8 183 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 Q8N377 158 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
SDF2-205ENST00000587629 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
SDF2-205ENST00000587629 TAX1BP3O14907 124 aa3.57□□□□□ -1.84
SDF2-205ENST00000587629 HERV-K104P63124 156 aa3.57□□□□□ -1.84
SDF2-205ENST00000587629 ATOH7Q8N100 152 aa3.57□□□□□ -1.84
SDF2-205ENST00000587629 Q9BRP9 147 aa3.57□□□□□ -1.84
SDF2-205ENST00000587629 MYMXA0A1B0GTQ4 84 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 C9orf118A6NHY6 69 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 PCP4P48539 62 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 C9orf153Q5TBE3 101 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 SSBP3-AS1Q7Z2R9 100 aa3.56□□□□□ -1.84
SDF2-205ENST00000587629 J3QR89 54 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 SLC25A20O43772 301 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 DPM2O94777 84 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 PLNP26678 52 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 NPC2P61916 151 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 OCIAD2Q56VL3 154 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 S100A7L2Q5SY68 101 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
SDF2-205ENST00000587629 IGKCP01834 107 aa3.54□□□□□ -1.84
SDF2-205ENST00000587629 FABP2P12104 132 aa3.54□□□□□ -1.84
SDF2-205ENST00000587629 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms