RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.33
LIG3-203ENST00000585370 LRCOL1A6NCL2 159 aa6.71□□□□□ -1.34
LIG3-203ENST00000585370 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
LIG3-203ENST00000585370 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 H3BQ85 93 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 PPDPFLQ8WWR9 84 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 DIRC1Q969H9 104 aa6.7□□□□□ -1.34
LIG3-203ENST00000585370 BAALC-AS2P0C853 105 aa6.69□□□□□ -1.34
LIG3-203ENST00000585370 C1orf134Q5TEV5 83 aa6.69□□□□□ -1.34
LIG3-203ENST00000585370 C9orf163Q8N9P6 203 aa6.69□□□□□ -1.34
LIG3-203ENST00000585370 FAM218AQ96MZ4 157 aa6.69□□□□□ -1.34
LIG3-203ENST00000585370 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
LIG3-203ENST00000585370 GHRHP01286 108 aa6.68□□□□□ -1.34
LIG3-203ENST00000585370 LINC00575Q6W349 94 aa6.68□□□□□ -1.34
LIG3-203ENST00000585370 Q8N814 137 aa6.68□□□□□ -1.34
LIG3-203ENST00000585370 KCNQ1DNQ9H478 68 aa6.68□□□□□ -1.34
LIG3-203ENST00000585370 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
LIG3-203ENST00000585370 TNP2Q05952 138 aa6.67□□□□□ -1.34
LIG3-203ENST00000585370 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
LIG3-203ENST00000585370 A0A087WYN8 130 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 hADV29S1A0JD25 119 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 COX7BP24311 80 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 C7orf33Q8WU49 177 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
LIG3-203ENST00000585370 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.65□□□□□ -1.34
LIG3-203ENST00000585370 A0A087WTM6 91 aa6.65□□□□□ -1.34
LIG3-203ENST00000585370 PRYO14603 147 aa6.65□□□□□ -1.34
LIG3-203ENST00000585370 C22orf24Q9Y442 160 aa6.65□□□□□ -1.34
LIG3-203ENST00000585370 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
LIG3-203ENST00000585370 TMEM256-PLSCR3K7ERE1 68 aa6.64□□□□□ -1.35
LIG3-203ENST00000585370 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
LIG3-203ENST00000585370 MRPL55Q7Z7F7 128 aaKnown RBP6.64□□□□□ -1.35
LIG3-203ENST00000585370 A0A096LNI7 61 aa6.63□□□□□ -1.35
LIG3-203ENST00000585370 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
LIG3-203ENST00000585370 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
LIG3-203ENST00000585370 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.62□□□□□ -1.35
LIG3-203ENST00000585370 FAT1Q14517 4588 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 SPRR1AP35321 89 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 FAM19A5Q7Z5A7 132 aaPredicted RBP6.61□□□□□ -1.35
LIG3-203ENST00000585370 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 HERC1Q15751 4861 aa6.61□□□□□ -1.35
LIG3-203ENST00000585370 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
LIG3-203ENST00000585370 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
LIG3-203ENST00000585370 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
LIG3-203ENST00000585370 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
LIG3-203ENST00000585370 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
LIG3-203ENST00000585370 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
LIG3-203ENST00000585370 A0A1W2PNN7 141 aa6.58□□□□□ -1.36
LIG3-203ENST00000585370 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
LIG3-203ENST00000585370 ACYP1P07311 99 aa6.58□□□□□ -1.36
LIG3-203ENST00000585370 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
LIG3-203ENST00000585370 VPS25Q9BRG1 176 aa6.58□□□□□ -1.36
LIG3-203ENST00000585370 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 EPM2AB3EWF7 344 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 B5MCH6 92 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
LIG3-203ENST00000585370 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 Q6ZRX8 168 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
LIG3-203ENST00000585370 Q6ZQY7 126 aa6.56□□□□□ -1.36
LIG3-203ENST00000585370 Q8N1X5 172 aa6.56□□□□□ -1.36
LIG3-203ENST00000585370 IGLV5-52A0A0A0MRZ9 124 aa6.55□□□□□ -1.36
LIG3-203ENST00000585370 SPACA4Q8TDM5 124 aa6.55□□□□□ -1.36
LIG3-203ENST00000585370 PDE6GP18545 87 aa6.54□□□□□ -1.36
LIG3-203ENST00000585370 H0Y9J4 135 aa6.53□□□□□ -1.36
LIG3-203ENST00000585370 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
LIG3-203ENST00000585370 UBE2BP63146 152 aa6.53□□□□□ -1.36
LIG3-203ENST00000585370 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
LIG3-203ENST00000585370 RBM3P98179 157 aaKnown RBP6.52□□□□□ -1.37
LIG3-203ENST00000585370 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
LIG3-203ENST00000585370 FUSP35637 526 aaKnown RBP eCLIP6.51□□□□□ -1.37
LIG3-203ENST00000585370 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
LIG3-203ENST00000585370 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
LIG3-203ENST00000585370 CCKP06307 115 aa6.5□□□□□ -1.37
LIG3-203ENST00000585370 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
LIG3-203ENST00000585370 FAM19A1Q7Z5A9 133 aa6.5□□□□□ -1.37
LIG3-203ENST00000585370 SIGMAR1Q99720 223 aa6.5□□□□□ -1.37
LIG3-203ENST00000585370 Q9BRP9 147 aa6.5□□□□□ -1.37
LIG3-203ENST00000585370 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
LIG3-203ENST00000585370 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
LIG3-203ENST00000585370 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
LIG3-203ENST00000585370 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
LIG3-203ENST00000585370 DSCR8Q96T75 97 aa6.49□□□□□ -1.37
LIG3-203ENST00000585370 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
LIG3-203ENST00000585370 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
LIG3-203ENST00000585370 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
LIG3-203ENST00000585370 IGLV5-48A0A075B6I7 105 aa6.48□□□□□ -1.37
LIG3-203ENST00000585370 XGP55808 180 aa6.48□□□□□ -1.37
LIG3-203ENST00000585370 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
LIG3-203ENST00000585370 DNAH8Q96JB1 4490 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms