RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
VAPA-209ENST00000585042 Q8NDZ9 215 aa8.6□□□□□ -1.03
VAPA-209ENST00000585042 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
VAPA-209ENST00000585042 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 DAND5Q8N907 189 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
VAPA-209ENST00000585042 NCR3O14931 201 aa8.57□□□□□ -1.04
VAPA-209ENST00000585042 TIMM17BO60830 172 aa8.57□□□□□ -1.04
VAPA-209ENST00000585042 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
VAPA-209ENST00000585042 NDUFC2O95298 119 aa8.56□□□□□ -1.04
VAPA-209ENST00000585042 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 PRYO14603 147 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 SPANXB1Q9NS25 103 aaPredicted RBP8.55□□□□□ -1.04
VAPA-209ENST00000585042 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
VAPA-209ENST00000585042 SPINK1P00995 79 aa8.54□□□□□ -1.04
VAPA-209ENST00000585042 SPRR1AP35321 89 aa8.54□□□□□ -1.04
VAPA-209ENST00000585042 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
VAPA-209ENST00000585042 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
VAPA-209ENST00000585042 KCNQ1DNQ9H478 68 aa8.54□□□□□ -1.04
VAPA-209ENST00000585042 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
VAPA-209ENST00000585042 CBY1Q9Y3M2 126 aa8.53□□□□□ -1.04
VAPA-209ENST00000585042 TRBV10-3A0A0K0K1G6 114 aa8.52□□□□□ -1.05
VAPA-209ENST00000585042 DDTP30046 118 aa8.52□□□□□ -1.05
VAPA-209ENST00000585042 NPC2P61916 151 aa8.52□□□□□ -1.05
VAPA-209ENST00000585042 ETDCA0A1B0GVM5 59 aa8.51□□□□□ -1.05
VAPA-209ENST00000585042 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
VAPA-209ENST00000585042 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
VAPA-209ENST00000585042 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
VAPA-209ENST00000585042 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
VAPA-209ENST00000585042 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
VAPA-209ENST00000585042 SCGB1D1O95968 90 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 Q8NBF4 154 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 LITAFQ99732 161 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
VAPA-209ENST00000585042 ASB16-AS1Q495Z4 193 aa8.49□□□□□ -1.05
VAPA-209ENST00000585042 Q6ZVH6 145 aa8.49□□□□□ -1.05
VAPA-209ENST00000585042 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
VAPA-209ENST00000585042 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
VAPA-209ENST00000585042 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
VAPA-209ENST00000585042 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
VAPA-209ENST00000585042 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
VAPA-209ENST00000585042 IFITM1P13164 125 aa8.47□□□□□ -1.05
VAPA-209ENST00000585042 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
VAPA-209ENST00000585042 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
VAPA-209ENST00000585042 IGLV6-57P01721 117 aa8.46□□□□□ -1.06
VAPA-209ENST00000585042 HINT1P49773 126 aaPredicted RBP8.46□□□□□ -1.06
VAPA-209ENST00000585042 OR13C6PQ8NH95 151 aa8.46□□□□□ -1.06
VAPA-209ENST00000585042 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
VAPA-209ENST00000585042 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
VAPA-209ENST00000585042 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
VAPA-209ENST00000585042 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
VAPA-209ENST00000585042 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
VAPA-209ENST00000585042 B5MCH6 92 aa8.43□□□□□ -1.06
VAPA-209ENST00000585042 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
VAPA-209ENST00000585042 GAGE2AQ6NT46 116 aa8.42□□□□□ -1.06
VAPA-209ENST00000585042 SLC25A20O43772 301 aa8.41□□□□□ -1.06
VAPA-209ENST00000585042 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
VAPA-209ENST00000585042 Q8N377 158 aa8.41□□□□□ -1.06
VAPA-209ENST00000585042 Q6ZRX8 168 aa8.4□□□□□ -1.06
VAPA-209ENST00000585042 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
VAPA-209ENST00000585042 MOBPQ13875 183 aa8.39□□□□□ -1.07
VAPA-209ENST00000585042 IGLV9-49A0A0B4J1Y8 123 aa8.38□□□□□ -1.07
VAPA-209ENST00000585042 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
VAPA-209ENST00000585042 C12orf57Q99622 126 aa8.38□□□□□ -1.07
VAPA-209ENST00000585042 Q9BRP9 147 aa8.38□□□□□ -1.07
VAPA-209ENST00000585042 A6NDN8 102 aa8.37□□□□□ -1.07
VAPA-209ENST00000585042 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
VAPA-209ENST00000585042 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
VAPA-209ENST00000585042 COX8AP10176 69 aa8.36□□□□□ -1.07
VAPA-209ENST00000585042 VAMP8Q9BV40 100 aa8.36□□□□□ -1.07
VAPA-209ENST00000585042 XP32Q5T750 250 aa8.35□□□□□ -1.07
VAPA-209ENST00000585042 KRTAP4-1Q9BYQ7 146 aa8.35□□□□□ -1.07
VAPA-209ENST00000585042 DLEU1O43261 78 aa8.34□□□□□ -1.07
VAPA-209ENST00000585042 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
VAPA-209ENST00000585042 COX7BP24311 80 aa8.33□□□□□ -1.08
VAPA-209ENST00000585042 SPATA45Q537H7 98 aa8.33□□□□□ -1.08
VAPA-209ENST00000585042 HIST1H4GQ99525 98 aa8.33□□□□□ -1.08
VAPA-209ENST00000585042 PAM16Q9Y3D7 125 aa8.33□□□□□ -1.08
VAPA-209ENST00000585042 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
VAPA-209ENST00000585042 C6orf99Q4VX62 202 aa8.32□□□□□ -1.08
VAPA-209ENST00000585042 ELOF1P60002 83 aaKnown RBP8.3□□□□□ -1.08
VAPA-209ENST00000585042 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
VAPA-209ENST00000585042 C14orf144Q96I85 54 aa8.3□□□□□ -1.08
VAPA-209ENST00000585042 A0A1B0GWB2 263 aa8.29□□□□□ -1.08
VAPA-209ENST00000585042 A4D1N5 150 aa8.29□□□□□ -1.08
VAPA-209ENST00000585042 VAMP3Q15836 100 aa8.29□□□□□ -1.08
VAPA-209ENST00000585042 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
VAPA-209ENST00000585042 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
VAPA-209ENST00000585042 NHP2Q9NX24 153 aaKnown RBP8.27□□□□□ -1.09
VAPA-209ENST00000585042 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms