RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 JOSD1Q15040 202 aaPredicted RBP3.47□□□□□ -1.85
CDH8-213ENST00000584966 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
CDH8-213ENST00000584966 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
CDH8-213ENST00000584966 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
CDH8-213ENST00000584966 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
CDH8-213ENST00000584966 AKR1D1P51857 326 aa3.46□□□□□ -1.86
CDH8-213ENST00000584966 LINC00158P58513 81 aa3.46□□□□□ -1.86
CDH8-213ENST00000584966 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
CDH8-213ENST00000584966 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
CDH8-213ENST00000584966 TP73-AS1Q9UF72 201 aa3.46□□□□□ -1.86
CDH8-213ENST00000584966 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 LINC00587B1AMM8 73 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 M0QXV9 152 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 TIMM17BO60830 172 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 PRR3P79522 188 aaKnown RBP3.45□□□□□ -1.86
CDH8-213ENST00000584966 PYY3Q5JQD4 70 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 DAND5Q8N907 189 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 LINC00167Q96N53 147 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 PSORS1C2Q9UIG4 136 aa3.45□□□□□ -1.86
CDH8-213ENST00000584966 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
CDH8-213ENST00000584966 RPL37AP61513 92 aaKnown RBP3.44□□□□□ -1.86
CDH8-213ENST00000584966 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
CDH8-213ENST00000584966 C7orf33Q8WU49 177 aa3.44□□□□□ -1.86
CDH8-213ENST00000584966 IGLV1-50A0A075B6I6 118 aa3.43□□□□□ -1.86
CDH8-213ENST00000584966 BOD1L2Q8IYS8 172 aa3.43□□□□□ -1.86
CDH8-213ENST00000584966 LINC00308Q8TCZ7 52 aa3.43□□□□□ -1.86
CDH8-213ENST00000584966 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 DLEU1O43261 78 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 NDUFC2O95298 119 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 INAFM2P0DMQ5 153 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 COX8AP10176 69 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 NPC2P61916 151 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 SPANXDQ9BXN6 97 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 SPANXCQ9NY87 97 aa3.42□□□□□ -1.86
CDH8-213ENST00000584966 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 LOC105371267A0A1B0GV96 52 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 HSBP1L1C9JCN9 74 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 M0R378 163 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 IGLV7-43P04211 117 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 C14orf144Q96I85 54 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
CDH8-213ENST00000584966 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
CDH8-213ENST00000584966 NCR3O14931 201 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 SPRR1AP35321 89 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 UBE2BP63146 152 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 SCGB1D4Q6XE38 83 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 C2orf91Q6ZV80 131 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 Q6ZVH6 145 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 LINC00518Q8N0U6 118 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 VAMP8Q9BV40 100 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.87
CDH8-213ENST00000584966 SPANXB1Q9NS25 103 aaPredicted RBP3.4□□□□□ -1.87
CDH8-213ENST00000584966 A0A087X002 238 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 BCE1O60756 84 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 IFITM1P13164 125 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 SPINK6Q6UWN8 80 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 NOTCH2NLQ7Z3S9 236 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 LINC00337Q8N6G1 96 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 TMEM126AQ9H061 195 aa3.39□□□□□ -1.87
CDH8-213ENST00000584966 ZNF861PO60384 105 aa3.38□□□□□ -1.87
CDH8-213ENST00000584966 DDTP30046 118 aa3.38□□□□□ -1.87
CDH8-213ENST00000584966 REG3GQ6UW15 175 aa3.38□□□□□ -1.87
CDH8-213ENST00000584966 HIGD1BQ9P298 99 aa3.38□□□□□ -1.87
CDH8-213ENST00000584966 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
CDH8-213ENST00000584966 H0Y9J4 135 aa3.37□□□□□ -1.87
CDH8-213ENST00000584966 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
CDH8-213ENST00000584966 MT1HL1P0DM35 61 aa3.37□□□□□ -1.87
CDH8-213ENST00000584966 SLC25A34Q6PIV7 304 aa3.37□□□□□ -1.87
CDH8-213ENST00000584966 MIEN1Q9BRT3 115 aa3.37□□□□□ -1.87
CDH8-213ENST00000584966 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
CDH8-213ENST00000584966 MT3P25713 68 aa3.36□□□□□ -1.87
CDH8-213ENST00000584966 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
CDH8-213ENST00000584966 PRLHP81277 87 aa3.36□□□□□ -1.87
CDH8-213ENST00000584966 LINC01600Q96MT4 127 aa3.36□□□□□ -1.87
CDH8-213ENST00000584966 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
CDH8-213ENST00000584966 TRAV23DV6A0A075B6W5 121 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 OXTP01178 125 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
CDH8-213ENST00000584966 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 SMCR5Q8TEV8 140 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 COPS9Q8WXC6 57 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 Q9BRP9 147 aa3.35□□□□□ -1.87
CDH8-213ENST00000584966 ZNF73O43830 326 aaPredicted RBP3.34□□□□□ -1.87
CDH8-213ENST00000584966 ERC2-IT1O76042 136 aa3.34□□□□□ -1.87
CDH8-213ENST00000584966 CFC1BP0CG36 223 aa3.34□□□□□ -1.87
CDH8-213ENST00000584966 CFC1P0CG37 223 aa3.34□□□□□ -1.87
CDH8-213ENST00000584966 SMIM6P0DI80 62 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms