RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877		K7ERU9	68 aa		4.98	□□□□□ -1.61
NUP85-223	ENST00000583877	PRLH	P81277	87 aa		4.98	□□□□□ -1.61
NUP85-223	ENST00000583877	HSD52	Q0P140	79 aa		4.98	□□□□□ -1.61
NUP85-223	ENST00000583877	ASB16-AS1	Q495Z4	193 aa		4.98	□□□□□ -1.61
NUP85-223	ENST00000583877	FP248	Q71RG6	208 aa	Predicted RBP	4.98	□□□□□ -1.61
NUP85-223	ENST00000583877		Q8N8P6	123 aa		4.98	□□□□□ -1.61
NUP85-223	ENST00000583877	LINC01549	A6NIU2	74 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877		H3BRM9	83 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	TAX1BP3	O14907	124 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	ATP5L	O75964	103 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	SPAG11A	Q6PDA7	123 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	BOD1L2	Q8IYS8	172 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	COX7B2	Q8TF08	81 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	HIGD1B	Q9P298	99 aa		4.97	□□□□□ -1.61
NUP85-223	ENST00000583877	IGIP	A6NJ69	53 aa		4.96	□□□□□ -1.62
NUP85-223	ENST00000583877		K7EMI3	77 aa		4.96	□□□□□ -1.62
NUP85-223	ENST00000583877	KRTAP13-3	Q3SY46	172 aa		4.96	□□□□□ -1.62
NUP85-223	ENST00000583877	C3orf22	Q8N5N4	141 aa		4.96	□□□□□ -1.62
NUP85-223	ENST00000583877	IFI27L1	Q96BM0	104 aa		4.96	□□□□□ -1.62
NUP85-223	ENST00000583877	SMIM1	B2RUZ4	78 aa		4.95	□□□□□ -1.62
NUP85-223	ENST00000583877	TAL2	Q16559	108 aa		4.95	□□□□□ -1.62
NUP85-223	ENST00000583877	KRTAP15-1	Q3LI76	137 aa		4.95	□□□□□ -1.62
NUP85-223	ENST00000583877	KRTAP4-1	Q9BYQ7	146 aa		4.95	□□□□□ -1.62
NUP85-223	ENST00000583877	TMEM238	C9JI98	176 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	SPINK8	P0C7L1	97 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	PFN2	P35080	140 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	SEC61B	P60468	96 aa	Known RBP	4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	C2orf91	Q6ZV80	131 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	PLEKHB2	Q96CS7	222 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	SCGB3A1	Q96QR1	104 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	HIGD2A	Q9BW72	106 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	TMEM126A	Q9H061	195 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877	CST9L	Q9H4G1	147 aa		4.94	□□□□□ -1.62
NUP85-223	ENST00000583877		A0A096LNJ9	63 aa		4.93	□□□□□ -1.62
NUP85-223	ENST00000583877	OCIAD2	Q56VL3	154 aa		4.93	□□□□□ -1.62
NUP85-223	ENST00000583877	MPLKIP	Q8TAP9	179 aa		4.93	□□□□□ -1.62
NUP85-223	ENST00000583877	TIMM17A	Q99595	171 aa		4.93	□□□□□ -1.62
NUP85-223	ENST00000583877	IGLV5-45	A0A087WSX0	123 aa		4.92	□□□□□ -1.62
NUP85-223	ENST00000583877	TINCR	A0A1B0GVN0	87 aa		4.92	□□□□□ -1.62
NUP85-223	ENST00000583877		K7EP34	96 aa		4.92	□□□□□ -1.62
NUP85-223	ENST00000583877	RPL24	P83731	157 aa	Known RBP	4.92	□□□□□ -1.62
NUP85-223	ENST00000583877	ERAS	Q7Z444	233 aa		4.92	□□□□□ -1.62
NUP85-223	ENST00000583877	TOMM6	Q96B49	74 aa		4.92	□□□□□ -1.62
NUP85-223	ENST00000583877	TRAV12-1	A0A0B4J245	112 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877		M0R378	163 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877	DPM2	O94777	84 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877	IGKC	P01834	107 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877	PLN	P26678	52 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877	DAND5	Q8N907	189 aa		4.91	□□□□□ -1.62
NUP85-223	ENST00000583877		H0Y8G0	127 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877		J3QR89	54 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	SMIM13	P0DJ93	91 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	VPREB1	P12018	145 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	FABP2	P12104	132 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	SPRR4	Q96PI1	79 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	VPS25	Q9BRG1	176 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	KRTAP9-9	Q9BYP9	154 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	KRTAP9-4	Q9BYQ2	154 aa		4.9	□□□□□ -1.63
NUP85-223	ENST00000583877	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP85-223	ENST00000583877		A0A1W2PPM0	123 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	SPINK1	P00995	79 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877		Q8NBF4	154 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	ZNF625	Q96I27	306 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	SND1-IT1	Q9HBX3	110 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	NDUFA12	Q9UI09	145 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	ERG28	Q9UKR5	140 aa		4.89	□□□□□ -1.63
NUP85-223	ENST00000583877	IGLV5-39	A0A0G2JS06	123 aa		4.88	□□□□□ -1.63
NUP85-223	ENST00000583877	NMU	P48645	174 aa		4.88	□□□□□ -1.63
NUP85-223	ENST00000583877		F8W1H4	67 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877		H3BUT2	72 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	SCGB1A1	P11684	91 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	COX17	Q14061	63 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	PMVK	Q15126	192 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	LYRM7	Q5U5X0	104 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877		Q6ZVH6	145 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	CEND1	Q8N111	149 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	KRTAP9-3	Q9BYQ3	159 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877	SPCS1	Q9Y6A9	102 aa		4.87	□□□□□ -1.63
NUP85-223	ENST00000583877		A0A0U1RRA0	63 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877		A0A1B0GWB2	263 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877	CFC1B	P0CG36	223 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877	LINC00158	P58513	81 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877	RPS29	P62273	56 aa	Known RBP	4.85	□□□□□ -1.63
NUP85-223	ENST00000583877		Q8NDZ9	215 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877	SMCR5	Q8TEV8	140 aa		4.85	□□□□□ -1.63
NUP85-223	ENST00000583877	IGLV9-49	A0A0B4J1Y8	123 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	ETDC	A0A1B0GVM5	59 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877		E9PLD3	99 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	HERVK_113	P61574	105 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	MT1H	P80294	61 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	KRTAP19-2	Q3LHN2	52 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	GAGE2A	Q6NT46	116 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	PCP2	Q8IVA1	136 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877		Q8N377	158 aa		4.84	□□□□□ -1.63
NUP85-223	ENST00000583877	MYMX	A0A1B0GTQ4	84 aa		4.83	□□□□□ -1.64
NUP85-223	ENST00000583877	ZNF22	P17026	224 aa	Predicted RBP	4.83	□□□□□ -1.64
NUP85-223	ENST00000583877	TMEM170B	Q5T4T1	132 aa		4.83	□□□□□ -1.64
NUP85-223	ENST00000583877	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.83	□□□□□ -1.64
NUP85-223	ENST00000583877	FLG	P20930	4061 aa	Predicted RBP	4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	NCR3	O14931	201 aa		4.82	□□□□□ -1.64

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