RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
GGA3-214ENST00000582717 C6orf48Q9UBA6 75 aa9.05□□□□□ -0.96
GGA3-214ENST00000582717 DEFB131BA0A096LNP1 70 aa9.04□□□□□ -0.96
GGA3-214ENST00000582717 ATP5EP56381 51 aaPredicted RBP9.04□□□□□ -0.96
GGA3-214ENST00000582717 ESRGQ1W209 222 aa9.03□□□□□ -0.96
GGA3-214ENST00000582717 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
GGA3-214ENST00000582717 K7EIL1 84 aa9.02□□□□□ -0.97
GGA3-214ENST00000582717 RMI2Q96E14 147 aa9.02□□□□□ -0.97
GGA3-214ENST00000582717 XAGE1AQ9HD64 81 aa9.02□□□□□ -0.97
GGA3-214ENST00000582717 SNURFQ9Y675 71 aa9.02□□□□□ -0.97
GGA3-214ENST00000582717 F8WEM9 126 aa9.01□□□□□ -0.97
GGA3-214ENST00000582717 ERC2-IT1O76042 136 aa9.01□□□□□ -0.97
GGA3-214ENST00000582717 M0R378 163 aa9.01□□□□□ -0.97
GGA3-214ENST00000582717 VPREB1P12018 145 aa9.01□□□□□ -0.97
GGA3-214ENST00000582717 SMIM26A0A096LP01 95 aa9□□□□□ -0.97
GGA3-214ENST00000582717 TM2D3Q9BRN9 247 aa9□□□□□ -0.97
GGA3-214ENST00000582717 NREPQ16612 68 aa8.99□□□□□ -0.97
GGA3-214ENST00000582717 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
GGA3-214ENST00000582717 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
GGA3-214ENST00000582717 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
GGA3-214ENST00000582717 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
GGA3-214ENST00000582717 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
GGA3-214ENST00000582717 BPY2O14599 106 aa8.98□□□□□ -0.97
GGA3-214ENST00000582717 CAMK2N2Q96S95 79 aa8.97□□□□□ -0.97
GGA3-214ENST00000582717 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.98
GGA3-214ENST00000582717 LINC01556Q5JQF7 62 aa8.95□□□□□ -0.98
GGA3-214ENST00000582717 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
GGA3-214ENST00000582717 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
GGA3-214ENST00000582717 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
GGA3-214ENST00000582717 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
GGA3-214ENST00000582717 F8WDY8 70 aa8.92□□□□□ -0.98
GGA3-214ENST00000582717 Q6ZRU5 148 aa8.92□□□□□ -0.98
GGA3-214ENST00000582717 PRO0628Q9UI54 55 aa8.92□□□□□ -0.98
GGA3-214ENST00000582717 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
GGA3-214ENST00000582717 C1orf43Q9BWL3 253 aa8.91□□□□□ -0.98
GGA3-214ENST00000582717 DNAH10OSP0CZ25 163 aa8.91□□□□□ -0.98
GGA3-214ENST00000582717 MDFIQ99750 246 aa8.91□□□□□ -0.98
GGA3-214ENST00000582717 IGKV2D-24A0A075B6R9 120 aa8.9□□□□□ -0.98
GGA3-214ENST00000582717 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
GGA3-214ENST00000582717 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
GGA3-214ENST00000582717 A0A1B0GW54 56 aa8.89□□□□□ -0.99
GGA3-214ENST00000582717 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
GGA3-214ENST00000582717 PRYO14603 147 aa8.88□□□□□ -0.99
GGA3-214ENST00000582717 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
GGA3-214ENST00000582717 Q8N9L7 120 aa8.87□□□□□ -0.99
GGA3-214ENST00000582717 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
GGA3-214ENST00000582717 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
GGA3-214ENST00000582717 Q6ZRP5 223 aa8.85□□□□□ -0.99
GGA3-214ENST00000582717 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
GGA3-214ENST00000582717 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
GGA3-214ENST00000582717 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
GGA3-214ENST00000582717 DNAH1Q9P2D7 4330 aa8.84□□□□□ -0.99
GGA3-214ENST00000582717 C3orf84H3BNL1 204 aa8.83□□□□□ -1
GGA3-214ENST00000582717 Q8N377 158 aa8.83□□□□□ -1
GGA3-214ENST00000582717 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
GGA3-214ENST00000582717 DNAH9Q9NYC9 4486 aa8.83□□□□□ -1
GGA3-214ENST00000582717 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
GGA3-214ENST00000582717 SYCNQ0VAF6 134 aa8.82□□□□□ -1
GGA3-214ENST00000582717 CASC10Q5T4H9 136 aa8.82□□□□□ -1
GGA3-214ENST00000582717 STAB2Q8WWQ8 2551 aa8.81□□□□□ -1
GGA3-214ENST00000582717 C7orf33Q8WU49 177 aa8.8□□□□□ -1
GGA3-214ENST00000582717 DEFB105AQ8NG35 78 aa8.8□□□□□ -1
GGA3-214ENST00000582717 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
GGA3-214ENST00000582717 LCE6AA0A183 80 aa8.79□□□□□ -1
GGA3-214ENST00000582717 Q6ZRX8 168 aa8.78□□□□□ -1
GGA3-214ENST00000582717 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
GGA3-214ENST00000582717 TLX1NBP0CAT3 122 aa8.77□□□□□ -1.01
GGA3-214ENST00000582717 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1.01
GGA3-214ENST00000582717 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
GGA3-214ENST00000582717 TNP2Q05952 138 aa8.77□□□□□ -1.01
GGA3-214ENST00000582717 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
GGA3-214ENST00000582717 Q8NBF4 154 aa8.76□□□□□ -1.01
GGA3-214ENST00000582717 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
GGA3-214ENST00000582717 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
GGA3-214ENST00000582717 B9D2Q9BPU9 175 aa8.75□□□□□ -1.01
GGA3-214ENST00000582717 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
GGA3-214ENST00000582717 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
GGA3-214ENST00000582717 SPRR1AP35321 89 aa8.74□□□□□ -1.01
GGA3-214ENST00000582717 SPRR4Q96PI1 79 aa8.74□□□□□ -1.01
GGA3-214ENST00000582717 LYSTQ99698 3801 aa8.74□□□□□ -1.01
GGA3-214ENST00000582717 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
GGA3-214ENST00000582717 Q9BRP9 147 aa8.73□□□□□ -1.01
GGA3-214ENST00000582717 KRTAP1-5Q9BYS1 174 aa8.73□□□□□ -1.01
GGA3-214ENST00000582717 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
GGA3-214ENST00000582717 DYNC2H1Q8NCM8 4307 aaKnown RBP8.73□□□□□ -1.01
GGA3-214ENST00000582717 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
GGA3-214ENST00000582717 APLNQ9ULZ1 77 aa8.71□□□□□ -1.01
GGA3-214ENST00000582717 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
GGA3-214ENST00000582717 BRK1Q8WUW1 75 aa8.71□□□□□ -1.02
GGA3-214ENST00000582717 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
GGA3-214ENST00000582717 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
GGA3-214ENST00000582717 RPL37AP8A6NKH3 93 aa8.69□□□□□ -1.02
GGA3-214ENST00000582717 DSCR10P59022 87 aa8.69□□□□□ -1.02
GGA3-214ENST00000582717 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
GGA3-214ENST00000582717 UBE2DNLQ8IWF7 75 aa8.68□□□□□ -1.02
GGA3-214ENST00000582717 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
GGA3-214ENST00000582717 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
GGA3-214ENST00000582717 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
GGA3-214ENST00000582717 K7EQZ3 153 aa8.66□□□□□ -1.02
GGA3-214ENST00000582717 HCG22E2RYF7 251 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms