RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 Q8N8P6 123 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TMEM126AQ9H061 195 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TOMM7Q9P0U1 55 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 NAT8Q9UHE5 227 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 A0A096LNJ9 63 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 LINC01546A6NGU7 62 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 J3QR89 54 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 SMAGPQ0VAQ4 97 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TMEM136Q6ZRR5 245 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
CDK5RAP3-221ENST00000581662 MT1FP04733 61 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 CKS1BP61024 79 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 HERV-K104P63124 156 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PDZD11Q5EBL8 140 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 CBLN2Q8IUK8 224 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 DAND5Q8N907 189 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TOMM6Q96B49 74 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 SIGMAR1Q99720 223 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 CYSLTR1Q9Y271 337 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
CDK5RAP3-221ENST00000581662 LOC389332A0A1B0GUA5 103 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 ATP5L2Q7Z4Y8 100 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 Q8N377 158 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 COX7B2Q8TF08 81 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 MIEN1Q9BRT3 115 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PRO1933Q9H354 126 aa4.09□□□□□ -1.75
CDK5RAP3-221ENST00000581662 SPINK8P0C7L1 97 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SPRR1AP35321 89 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 CXCL5P42830 114 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 HERVK_113P63121 156 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 C6orf226Q5I0X4 101 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SPAG11AQ6PDA7 123 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 LAMTOR2Q9Y2Q5 125 aa4.08□□□□□ -1.76
CDK5RAP3-221ENST00000581662 TINCRA0A1B0GVN0 87 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 NDUFA6P56556 154 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 BOD1L2Q8IYS8 172 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 Q8NBF4 154 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
CDK5RAP3-221ENST00000581662 IGKV2D-26A0A0A0MRZ7 120 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ZNF22P17026 224 aaPredicted RBP4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 UBE2AP49459 152 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 FAM19A1Q7Z5A9 133 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 MAP1LC3AQ9H492 121 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 RPS10P5Q9NQ39 176 aa4.06□□□□□ -1.76
CDK5RAP3-221ENST00000581662 FABP4P15090 132 aa4.05□□□□□ -1.76
CDK5RAP3-221ENST00000581662 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
CDK5RAP3-221ENST00000581662 COA6Q5JTJ3 125 aaKnown RBP4.05□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
CDK5RAP3-221ENST00000581662 IGLC3P0DOY3 106 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 KIAA1644Q3SXP7 199 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ERASQ7Z444 233 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 SPANXDQ9BXN6 97 aa4.04□□□□□ -1.76
CDK5RAP3-221ENST00000581662 K7EMI3 77 aa4.03□□□□□ -1.76
CDK5RAP3-221ENST00000581662 Q9BRP9 147 aa4.03□□□□□ -1.76
CDK5RAP3-221ENST00000581662 UQCR10Q9UDW1 63 aa4.03□□□□□ -1.76
CDK5RAP3-221ENST00000581662 ERG28Q9UKR5 140 aa4.03□□□□□ -1.76
CDK5RAP3-221ENST00000581662 C11orf86A6NJI1 115 aa4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 PFN2P35080 140 aa4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 NKAPP1Q8N9T2 125 aa4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIGD2AQ9BW72 106 aa4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 NXT2Q9NPJ8 142 aaKnown RBP4.02□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BKO60814 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BJP06899 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BOP23527 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BBP33778 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BDP58876 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BCP62807 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 PMVKQ15126 192 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST2H2BEQ16778 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BHQ93079 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BNQ99877 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HIST1H2BMQ99879 126 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HSPB8Q9UJY1 196 aa4.01□□□□□ -1.77
CDK5RAP3-221ENST00000581662 SEC11AP67812 179 aa4□□□□□ -1.77
CDK5RAP3-221ENST00000581662 VAMP8Q9BV40 100 aa4□□□□□ -1.77
CDK5RAP3-221ENST00000581662 NDUFA12Q9UI09 145 aa4□□□□□ -1.77
CDK5RAP3-221ENST00000581662 HSBP1O75506 76 aa3.99□□□□□ -1.77
CDK5RAP3-221ENST00000581662 SPINK1P00995 79 aa3.99□□□□□ -1.77
CDK5RAP3-221ENST00000581662 SEC61GP60059 68 aa3.99□□□□□ -1.77
CDK5RAP3-221ENST00000581662 SCGB3A1Q96QR1 104 aa3.99□□□□□ -1.77
CDK5RAP3-221ENST00000581662 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
CDK5RAP3-221ENST00000581662 KCNQ1DNQ9H478 68 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 774.7 ms