RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
SCN4A-202ENST00000581514 NMUP48645 174 aa8.13□□□□□ -1.11
SCN4A-202ENST00000581514 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SCN4A-202ENST00000581514 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
SCN4A-202ENST00000581514 LGALS3P17931 250 aaKnown RBP8.12□□□□□ -1.11
SCN4A-202ENST00000581514 HERVK_113P61574 105 aa8.12□□□□□ -1.11
SCN4A-202ENST00000581514 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
SCN4A-202ENST00000581514 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SCN4A-202ENST00000581514 DPM2O94777 84 aa8.11□□□□□ -1.11
SCN4A-202ENST00000581514 NPC2P61916 151 aa8.1□□□□□ -1.11
SCN4A-202ENST00000581514 MT1HP80294 61 aa8.1□□□□□ -1.11
SCN4A-202ENST00000581514 PCOTHQ58A44 107 aa8.1□□□□□ -1.11
SCN4A-202ENST00000581514 PMCHL2Q9BQD1 86 aa8.1□□□□□ -1.11
SCN4A-202ENST00000581514 LINC00310P59036 64 aa8.09□□□□□ -1.11
SCN4A-202ENST00000581514 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
SCN4A-202ENST00000581514 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
SCN4A-202ENST00000581514 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 SERF1AO75920 110 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 IGKCP01834 107 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 SPRR1BP22528 89 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 HINT1P49773 126 aaPredicted RBP8.08□□□□□ -1.12
SCN4A-202ENST00000581514 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 HSPB8Q9UJY1 196 aa8.08□□□□□ -1.12
SCN4A-202ENST00000581514 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
SCN4A-202ENST00000581514 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
SCN4A-202ENST00000581514 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
SCN4A-202ENST00000581514 TRGC2P03986 189 aa8.06□□□□□ -1.12
SCN4A-202ENST00000581514 FABP4P15090 132 aa8.06□□□□□ -1.12
SCN4A-202ENST00000581514 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
SCN4A-202ENST00000581514 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
SCN4A-202ENST00000581514 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
SCN4A-202ENST00000581514 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
SCN4A-202ENST00000581514 E9PLD3 99 aa8.03□□□□□ -1.12
SCN4A-202ENST00000581514 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
SCN4A-202ENST00000581514 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
SCN4A-202ENST00000581514 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
SCN4A-202ENST00000581514 LITAFQ99732 161 aa8.01□□□□□ -1.13
SCN4A-202ENST00000581514 CD164Q04900 197 aa8□□□□□ -1.13
SCN4A-202ENST00000581514 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
SCN4A-202ENST00000581514 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
SCN4A-202ENST00000581514 TIMM17BO60830 172 aa7.98□□□□□ -1.13
SCN4A-202ENST00000581514 COX7BP24311 80 aa7.98□□□□□ -1.13
SCN4A-202ENST00000581514 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
SCN4A-202ENST00000581514 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
SCN4A-202ENST00000581514 TAL2Q16559 108 aa7.98□□□□□ -1.13
SCN4A-202ENST00000581514 Q1RN00 199 aa7.98□□□□□ -1.13
SCN4A-202ENST00000581514 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
SCN4A-202ENST00000581514 PRO1933Q9H354 126 aa7.97□□□□□ -1.13
SCN4A-202ENST00000581514 H7C2G1 150 aa7.96□□□□□ -1.14
SCN4A-202ENST00000581514 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
SCN4A-202ENST00000581514 Q5XG85 94 aa7.95□□□□□ -1.14
SCN4A-202ENST00000581514 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
SCN4A-202ENST00000581514 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
SCN4A-202ENST00000581514 LINC00518Q8N0U6 118 aa7.93□□□□□ -1.14
SCN4A-202ENST00000581514 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
SCN4A-202ENST00000581514 ZNF815PA8K554 130 aa7.92□□□□□ -1.14
SCN4A-202ENST00000581514 SYS1-DBNDD2H3BUS1 97 aa7.92□□□□□ -1.14
SCN4A-202ENST00000581514 AKR1D1P51857 326 aa7.92□□□□□ -1.14
SCN4A-202ENST00000581514 RPL37P61927 97 aaKnown RBP7.92□□□□□ -1.14
SCN4A-202ENST00000581514 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
SCN4A-202ENST00000581514 M0R2T5 61 aa7.91□□□□□ -1.14
SCN4A-202ENST00000581514 A0A0G2JQZ4 141 aa7.9□□□□□ -1.14
SCN4A-202ENST00000581514 TRBV7-6A0A0J9YX20 115 aa7.9□□□□□ -1.14
SCN4A-202ENST00000581514 TTTY13Q9BZ97 58 aa7.9□□□□□ -1.14
SCN4A-202ENST00000581514 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
SCN4A-202ENST00000581514 COLCA2A8K830 154 aa7.89□□□□□ -1.15
SCN4A-202ENST00000581514 LINC01545Q5VT33 79 aa7.89□□□□□ -1.15
SCN4A-202ENST00000581514 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
SCN4A-202ENST00000581514 A0A1B0GWB2 263 aa7.88□□□□□ -1.15
SCN4A-202ENST00000581514 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
SCN4A-202ENST00000581514 A6NDN8 102 aa7.83□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 TCL1BO95988 128 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
SCN4A-202ENST00000581514 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 COPS9Q8WXC6 57 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
SCN4A-202ENST00000581514 A4D1N5 150 aa7.81□□□□□ -1.16
SCN4A-202ENST00000581514 IFITM1P13164 125 aa7.81□□□□□ -1.16
SCN4A-202ENST00000581514 C3orf79P0CE67 100 aa7.8□□□□□ -1.16
SCN4A-202ENST00000581514 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
SCN4A-202ENST00000581514 Q6ZVH6 145 aa7.78□□□□□ -1.16
SCN4A-202ENST00000581514 MUSTN1Q8IVN3 82 aa7.78□□□□□ -1.16
SCN4A-202ENST00000581514 SMIM11BQ8TCY0 68 aa7.77□□□□□ -1.17
SCN4A-202ENST00000581514 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
SCN4A-202ENST00000581514 F8WEM9 126 aa7.76□□□□□ -1.17
SCN4A-202ENST00000581514 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
SCN4A-202ENST00000581514 SLC7A5P1Q8MH63 180 aa7.76□□□□□ -1.17
SCN4A-202ENST00000581514 KRTDAPP60985 99 aa7.75□□□□□ -1.17
SCN4A-202ENST00000581514 PCP2Q8IVA1 136 aa7.74□□□□□ -1.17
SCN4A-202ENST00000581514 Q6Q795 121 aa7.73□□□□□ -1.17
SCN4A-202ENST00000581514 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms