RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 BAALC-AS2P0C853 105 aa8.86□□□□□ -0.99
CDK5RAP3-219ENST00000580670 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
CDK5RAP3-219ENST00000580670 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-219ENST00000580670 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-219ENST00000580670 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
CDK5RAP3-219ENST00000580670 NCR3O14931 201 aa8.85□□□□□ -0.99
CDK5RAP3-219ENST00000580670 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
CDK5RAP3-219ENST00000580670 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
CDK5RAP3-219ENST00000580670 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
CDK5RAP3-219ENST00000580670 INAFM2P0DMQ5 153 aa8.84□□□□□ -0.99
CDK5RAP3-219ENST00000580670 VPREB1P12018 145 aa8.84□□□□□ -0.99
CDK5RAP3-219ENST00000580670 FAM168BA1KXE4 195 aa8.84□□□□□ -1
CDK5RAP3-219ENST00000580670 SERTAD4-AS1Q5TG53 156 aa8.84□□□□□ -1
CDK5RAP3-219ENST00000580670 LINC00337Q8N6G1 96 aa8.84□□□□□ -1
CDK5RAP3-219ENST00000580670 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
CDK5RAP3-219ENST00000580670 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
CDK5RAP3-219ENST00000580670 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
CDK5RAP3-219ENST00000580670 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
CDK5RAP3-219ENST00000580670 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
CDK5RAP3-219ENST00000580670 FAM236AA0A1B0GUQ0 79 aa8.81□□□□□ -1
CDK5RAP3-219ENST00000580670 FAM236BA0A1B0GV22 79 aa8.81□□□□□ -1
CDK5RAP3-219ENST00000580670 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-219ENST00000580670 NKAPP1Q8N9T2 125 aa8.81□□□□□ -1
CDK5RAP3-219ENST00000580670 PANO1I0J062 215 aa8.8□□□□□ -1
CDK5RAP3-219ENST00000580670 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
CDK5RAP3-219ENST00000580670 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
CDK5RAP3-219ENST00000580670 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
CDK5RAP3-219ENST00000580670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-219ENST00000580670 M0R378 163 aa8.79□□□□□ -1
CDK5RAP3-219ENST00000580670 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
CDK5RAP3-219ENST00000580670 DPH3Q96FX2 82 aa8.79□□□□□ -1
CDK5RAP3-219ENST00000580670 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
CDK5RAP3-219ENST00000580670 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 A0A1W2PNN7 141 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 H0YGX0 51 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 UQCRQO14949 82 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 PKD1P98161 4303 aa8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-219ENST00000580670 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
CDK5RAP3-219ENST00000580670 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
CDK5RAP3-219ENST00000580670 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
CDK5RAP3-219ENST00000580670 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
CDK5RAP3-219ENST00000580670 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-219ENST00000580670 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
CDK5RAP3-219ENST00000580670 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
CDK5RAP3-219ENST00000580670 A0A087WYN8 130 aa8.74□□□□□ -1.01
CDK5RAP3-219ENST00000580670 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
CDK5RAP3-219ENST00000580670 DNAH5Q8TE73 4624 aa8.74□□□□□ -1.01
CDK5RAP3-219ENST00000580670 COX7CP15954 63 aa8.73□□□□□ -1.01
CDK5RAP3-219ENST00000580670 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
CDK5RAP3-219ENST00000580670 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
CDK5RAP3-219ENST00000580670 RPL37AP8A6NKH3 93 aa8.73□□□□□ -1.01
CDK5RAP3-219ENST00000580670 ATOX1O00244 68 aa8.72□□□□□ -1.01
CDK5RAP3-219ENST00000580670 DNAL4O96015 105 aa8.72□□□□□ -1.01
CDK5RAP3-219ENST00000580670 Q6JHZ5 121 aa8.72□□□□□ -1.01
CDK5RAP3-219ENST00000580670 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
CDK5RAP3-219ENST00000580670 TRAV23DV6A0A075B6W5 121 aa8.71□□□□□ -1.01
CDK5RAP3-219ENST00000580670 CRYGAP11844 174 aa8.71□□□□□ -1.01
CDK5RAP3-219ENST00000580670 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.01
CDK5RAP3-219ENST00000580670 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
CDK5RAP3-219ENST00000580670 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.02
CDK5RAP3-219ENST00000580670 RYR3Q15413 4870 aa8.7□□□□□ -1.02
CDK5RAP3-219ENST00000580670 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
CDK5RAP3-219ENST00000580670 Q6ZSA8 131 aa8.69□□□□□ -1.02
CDK5RAP3-219ENST00000580670 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
CDK5RAP3-219ENST00000580670 A0A1B0GX51 115 aa8.68□□□□□ -1.02
CDK5RAP3-219ENST00000580670 UBE2BP63146 152 aa8.68□□□□□ -1.02
CDK5RAP3-219ENST00000580670 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
CDK5RAP3-219ENST00000580670 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-219ENST00000580670 PRYO14603 147 aa8.67□□□□□ -1.02
CDK5RAP3-219ENST00000580670 DIRC1Q969H9 104 aa8.67□□□□□ -1.02
CDK5RAP3-219ENST00000580670 C14orf132Q9NPU4 83 aa8.67□□□□□ -1.02
CDK5RAP3-219ENST00000580670 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
CDK5RAP3-219ENST00000580670 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
CDK5RAP3-219ENST00000580670 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
CDK5RAP3-219ENST00000580670 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-219ENST00000580670 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
CDK5RAP3-219ENST00000580670 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
CDK5RAP3-219ENST00000580670 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
CDK5RAP3-219ENST00000580670 ORMDL1Q9P0S3 153 aa8.65□□□□□ -1.02
CDK5RAP3-219ENST00000580670 CCKP06307 115 aa8.64□□□□□ -1.03
CDK5RAP3-219ENST00000580670 REG3GQ6UW15 175 aa8.64□□□□□ -1.03
CDK5RAP3-219ENST00000580670 HAMPP81172 84 aa8.63□□□□□ -1.03
CDK5RAP3-219ENST00000580670 COX7BP24311 80 aa8.63□□□□□ -1.03
CDK5RAP3-219ENST00000580670 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
CDK5RAP3-219ENST00000580670 TRBV7-6A0A0J9YX20 115 aa8.62□□□□□ -1.03
CDK5RAP3-219ENST00000580670 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
CDK5RAP3-219ENST00000580670 SPRR1AP35321 89 aa8.62□□□□□ -1.03
CDK5RAP3-219ENST00000580670 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
CDK5RAP3-219ENST00000580670 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
CDK5RAP3-219ENST00000580670 J3KT08 172 aa8.61□□□□□ -1.03
CDK5RAP3-219ENST00000580670 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-219ENST00000580670 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
CDK5RAP3-219ENST00000580670 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-219ENST00000580670 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-219ENST00000580670 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
CDK5RAP3-219ENST00000580670 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
CDK5RAP3-219ENST00000580670 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
CDK5RAP3-219ENST00000580670 hADV29S1A0JD25 119 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms