RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
SMARCE1-217ENST00000580654 C9orf92A6NGG3 77 aa4.05□□□□□ -1.76
SMARCE1-217ENST00000580654 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
SMARCE1-217ENST00000580654 CKS2P33552 79 aa4.04□□□□□ -1.76
SMARCE1-217ENST00000580654 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
SMARCE1-217ENST00000580654 TRBV24-1A0A075B6N3 115 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 TMEM250H0YL14 139 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 PSPHP1O15172 72 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 MT2AP02795 61 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 OCIAD2Q56VL3 154 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 FAM104BQ5XKR9 115 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 TEX43Q6ZNM6 134 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 Q8NDZ9 215 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 SMIM7Q9BQ49 75 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 SMIM2Q9BVW6 85 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 EIF5A2Q9GZV4 153 aaKnown RBP4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 OSTCQ9NRP0 149 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 LAMTOR3Q9UHA4 124 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 ERG28Q9UKR5 140 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 PYGO1Q9Y3Y4 419 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
SMARCE1-217ENST00000580654 LINC00862A6NCI5 91 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 MOBPQ13875 183 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 LINC01551Q86U37 167 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 ANKRD29Q8N6D5 301 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 TMEM141Q96I45 108 aa4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 ZNF706Q9Y5V0 76 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-217ENST00000580654 MT1FP04733 61 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 AMELXQ99217 191 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 CDKN2A-AS1Q9UH64 79 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 NAT8BQ9UHF3 227 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 V9GYV3 84 aa4.01□□□□□ -1.77
SMARCE1-217ENST00000580654 IGLV5-39A0A0G2JS06 123 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 CXCL5P42830 114 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 RHEBQ15382 184 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 LAMTOR2Q9Y2Q5 125 aa4□□□□□ -1.77
SMARCE1-217ENST00000580654 D6R8Y8 96 aa3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 M0R143 59 aa3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 NPYP01303 97 aa3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 C2orf66Q6UXQ4 117 aa3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 SMCR5Q8TEV8 140 aa3.99□□□□□ -1.77
SMARCE1-217ENST00000580654 SMIM1B2RUZ4 78 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 C9JAW5 83 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 FABP9Q0Z7S8 132 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 MRPL54Q6P161 138 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 Q6Q795 121 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 ALKAL2Q6UX46 152 aa3.98□□□□□ -1.77
SMARCE1-217ENST00000580654 LOC389332A0A1B0GUA5 103 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 J3QR89 54 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 SRP19P09132 144 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 ADIRFQ15847 76 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 ATP5L2Q7Z4Y8 100 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 TCTE3Q8IZS6 198 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 COX7B2Q8TF08 81 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
SMARCE1-217ENST00000580654 SMIM27A0A1W2PRY6 76 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 RPL23P62829 140 aaKnown RBP3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 HERVK_113P63121 156 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 C6orf99Q4VX62 202 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 TMEM136Q6ZRR5 245 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 ORMDL3Q8N138 153 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 PRELID3AQ96N28 172 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 SND1-IT1Q9HBX3 110 aa3.96□□□□□ -1.78
SMARCE1-217ENST00000580654 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
SMARCE1-217ENST00000580654 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
SMARCE1-217ENST00000580654 COA6Q5JTJ3 125 aaKnown RBP3.95□□□□□ -1.78
SMARCE1-217ENST00000580654 CYSLTR1Q9Y271 337 aa3.95□□□□□ -1.78
SMARCE1-217ENST00000580654 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 TMEM218A2RU14 115 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 SPRR1AP35321 89 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 MP68P56378 58 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 SEC11AP67812 179 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 TIMM17AQ99595 171 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 NAT8Q9UHE5 227 aa3.94□□□□□ -1.78
SMARCE1-217ENST00000580654 DPM2O94777 84 aa3.93□□□□□ -1.78
SMARCE1-217ENST00000580654 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
SMARCE1-217ENST00000580654 IMUPQ9GZP8 106 aa3.93□□□□□ -1.78
SMARCE1-217ENST00000580654 SCGB1C2P0DMR2 95 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 NDUFV3P56181 108 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 ORMDL2Q53FV1 153 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 Q8N8P6 123 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 YPEL4Q96NS1 127 aa3.92□□□□□ -1.78
SMARCE1-217ENST00000580654 SPINK8P0C7L1 97 aa3.91□□□□□ -1.78
SMARCE1-217ENST00000580654 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms