RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.43□□□□□ -0.58
ERBB2-205ENST00000578199 LINC00528Q8N1L1 170 aa11.43□□□□□ -0.58
ERBB2-205ENST00000578199 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
ERBB2-205ENST00000578199 LOC110117498A0A087WWA1 95 aa11.42□□□□□ -0.58
ERBB2-205ENST00000578199 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
ERBB2-205ENST00000578199 C7orf33Q8WU49 177 aa11.42□□□□□ -0.58
ERBB2-205ENST00000578199 DNAH9Q9NYC9 4486 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 FAM19A1Q7Z5A9 133 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 RPL37AP8A6NKH3 93 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 TMEM258P61165 79 aa11.41□□□□□ -0.58
ERBB2-205ENST00000578199 OXTP01178 125 aa11.4□□□□□ -0.59
ERBB2-205ENST00000578199 STAB2Q8WWQ8 2551 aa11.39□□□□□ -0.59
ERBB2-205ENST00000578199 F8WDY8 70 aa11.39□□□□□ -0.59
ERBB2-205ENST00000578199 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
ERBB2-205ENST00000578199 DEFB105AQ8NG35 78 aa11.36□□□□□ -0.59
ERBB2-205ENST00000578199 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
ERBB2-205ENST00000578199 KCNQ1DNQ9H478 68 aa11.36□□□□□ -0.59
ERBB2-205ENST00000578199 DNAH7Q8WXX0 4024 aa11.36□□□□□ -0.59
ERBB2-205ENST00000578199 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
ERBB2-205ENST00000578199 TENM2Q9NT68 2774 aa11.35□□□□□ -0.59
ERBB2-205ENST00000578199 HAMPP81172 84 aa11.35□□□□□ -0.59
ERBB2-205ENST00000578199 TRBV7-4A0A0J9YYF1 115 aa11.35□□□□□ -0.59
ERBB2-205ENST00000578199 Q5XG85 94 aa11.35□□□□□ -0.59
ERBB2-205ENST00000578199 Q6ZVQ6 151 aa11.35□□□□□ -0.59
ERBB2-205ENST00000578199 CSMD3Q7Z407 3707 aa11.34□□□□□ -0.59
ERBB2-205ENST00000578199 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
ERBB2-205ENST00000578199 SERP2Q8N6R1 65 aa11.34□□□□□ -0.59
ERBB2-205ENST00000578199 H3BQ85 93 aa11.34□□□□□ -0.59
ERBB2-205ENST00000578199 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.6
ERBB2-205ENST00000578199 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
ERBB2-205ENST00000578199 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
ERBB2-205ENST00000578199 ATP5EP2Q5VTU8 51 aa11.32□□□□□ -0.6
ERBB2-205ENST00000578199 PDE6GP18545 87 aa11.3□□□□□ -0.6
ERBB2-205ENST00000578199 RMI2Q96E14 147 aa11.3□□□□□ -0.6
ERBB2-205ENST00000578199 GHRHP01286 108 aa11.3□□□□□ -0.6
ERBB2-205ENST00000578199 IGLV1-50A0A075B6I6 118 aa11.29□□□□□ -0.6
ERBB2-205ENST00000578199 SCXQ7RTU7 201 aa11.29□□□□□ -0.6
ERBB2-205ENST00000578199 Q9BRP9 147 aa11.29□□□□□ -0.6
ERBB2-205ENST00000578199 Q8N377 158 aa11.28□□□□□ -0.6
ERBB2-205ENST00000578199 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
ERBB2-205ENST00000578199 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-205ENST00000578199 Q6ZRX8 168 aa11.26□□□□□ -0.61
ERBB2-205ENST00000578199 ST20-AS1Q8NBB2 130 aa11.26□□□□□ -0.61
ERBB2-205ENST00000578199 MDFIQ99750 246 aa11.25□□□□□ -0.61
ERBB2-205ENST00000578199 MRPL55Q7Z7F7 128 aaKnown RBP11.25□□□□□ -0.61
ERBB2-205ENST00000578199 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
ERBB2-205ENST00000578199 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
ERBB2-205ENST00000578199 IGLV5-37A0A075B6J1 123 aa11.24□□□□□ -0.61
ERBB2-205ENST00000578199 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
ERBB2-205ENST00000578199 ERC2-IT1O76042 136 aa11.22□□□□□ -0.61
ERBB2-205ENST00000578199 PRYO14603 147 aa11.22□□□□□ -0.61
ERBB2-205ENST00000578199 SPRR1AP35321 89 aa11.22□□□□□ -0.61
ERBB2-205ENST00000578199 C3orf84H3BNL1 204 aa11.21□□□□□ -0.61
ERBB2-205ENST00000578199 UBE2DNLQ8IWF7 75 aa11.21□□□□□ -0.61
ERBB2-205ENST00000578199 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.2□□□□□ -0.62
ERBB2-205ENST00000578199 PSCAO43653 123 aa11.2□□□□□ -0.62
ERBB2-205ENST00000578199 A0A096LNI7 61 aa11.2□□□□□ -0.62
ERBB2-205ENST00000578199 DHRS4-AS1Q9P1J3 65 aa11.2□□□□□ -0.62
ERBB2-205ENST00000578199 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
ERBB2-205ENST00000578199 APLNQ9ULZ1 77 aa11.19□□□□□ -0.62
ERBB2-205ENST00000578199 UBE2BP63146 152 aa11.18□□□□□ -0.62
ERBB2-205ENST00000578199 CXCL6P80162 114 aa11.18□□□□□ -0.62
ERBB2-205ENST00000578199 Q8N9L7 120 aa11.17□□□□□ -0.62
ERBB2-205ENST00000578199 A0A1W2PNN7 141 aa11.16□□□□□ -0.62
ERBB2-205ENST00000578199 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.62
ERBB2-205ENST00000578199 REG3GQ6UW15 175 aa11.15□□□□□ -0.62
ERBB2-205ENST00000578199 SRRM2Q9UQ35 2752 aaKnown RBP11.14□□□□□ -0.63
ERBB2-205ENST00000578199 NREPQ16612 68 aa11.13□□□□□ -0.63
ERBB2-205ENST00000578199 PRO0628Q9UI54 55 aa11.13□□□□□ -0.63
ERBB2-205ENST00000578199 CHTF8P0CG12 524 aa11.12□□□□□ -0.63
ERBB2-205ENST00000578199 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
ERBB2-205ENST00000578199 PRLHP81277 87 aa11.11□□□□□ -0.63
ERBB2-205ENST00000578199 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
ERBB2-205ENST00000578199 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
ERBB2-205ENST00000578199 EPM2AB3EWF7 344 aa11.11□□□□□ -0.63
ERBB2-205ENST00000578199 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
ERBB2-205ENST00000578199 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
ERBB2-205ENST00000578199 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
ERBB2-205ENST00000578199 C20orf197Q8N268 126 aa11.1□□□□□ -0.63
ERBB2-205ENST00000578199 B9D2Q9BPU9 175 aa11.1□□□□□ -0.63
ERBB2-205ENST00000578199 FAM236DA0A1B0GTK5 79 aa11.09□□□□□ -0.63
ERBB2-205ENST00000578199 FAM236CP0DP71 79 aa11.09□□□□□ -0.63
ERBB2-205ENST00000578199 TNP2Q05952 138 aa11.09□□□□□ -0.63
ERBB2-205ENST00000578199 STARD9Q9P2P6 4700 aa11.09□□□□□ -0.63
ERBB2-205ENST00000578199 BPY2O14599 106 aa11.09□□□□□ -0.63
ERBB2-205ENST00000578199 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
ERBB2-205ENST00000578199 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
ERBB2-205ENST00000578199 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
ERBB2-205ENST00000578199 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
ERBB2-205ENST00000578199 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
ERBB2-205ENST00000578199 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
ERBB2-205ENST00000578199 IGKV4-1P06312 121 aa11.05□□□□□ -0.64
ERBB2-205ENST00000578199 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
ERBB2-205ENST00000578199 TRAV7A0A075B6U4 112 aa11.04□□□□□ -0.64
ERBB2-205ENST00000578199 H7BZZ5 65 aa11.03□□□□□ -0.64
ERBB2-205ENST00000578199 Q8NBF4 154 aa11.02□□□□□ -0.65
ERBB2-205ENST00000578199 NBDYA0A0U1RRE5 68 aa11.01□□□□□ -0.65
ERBB2-205ENST00000578199 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms