RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 KIAA0087Q14695 138 aa9.24□□□□□ -0.93
RNF43-202ENST00000577625 TRBV7-4A0A0J9YYF1 115 aa9.23□□□□□ -0.93
RNF43-202ENST00000577625 CXCL6P80162 114 aa9.23□□□□□ -0.93
RNF43-202ENST00000577625 Q6ZQT0 140 aa9.23□□□□□ -0.93
RNF43-202ENST00000577625 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
RNF43-202ENST00000577625 LINC01556Q5JQF7 62 aa9.22□□□□□ -0.93
RNF43-202ENST00000577625 HAMPP81172 84 aa9.2□□□□□ -0.94
RNF43-202ENST00000577625 Q6ZVQ6 151 aa9.2□□□□□ -0.94
RNF43-202ENST00000577625 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
RNF43-202ENST00000577625 FAM229BQ4G0N7 80 aa9.2□□□□□ -0.94
RNF43-202ENST00000577625 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
RNF43-202ENST00000577625 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
RNF43-202ENST00000577625 LINC00588Q9Y4M8 146 aa9.19□□□□□ -0.94
RNF43-202ENST00000577625 DNAH10OSP0CZ25 163 aa9.18□□□□□ -0.94
RNF43-202ENST00000577625 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
RNF43-202ENST00000577625 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
RNF43-202ENST00000577625 LAMTOR3Q9UHA4 124 aa9.18□□□□□ -0.94
RNF43-202ENST00000577625 COX17Q14061 63 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 MEGF8Q7Z7M0 2845 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
RNF43-202ENST00000577625 NREPQ16612 68 aa9.16□□□□□ -0.94
RNF43-202ENST00000577625 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
RNF43-202ENST00000577625 PDE6GP18545 87 aa9.15□□□□□ -0.94
RNF43-202ENST00000577625 Q6ZRU5 148 aa9.13□□□□□ -0.95
RNF43-202ENST00000577625 UNQ6190/PRO20217Q6UXQ8 127 aa9.13□□□□□ -0.95
RNF43-202ENST00000577625 M0R2N4 97 aa9.12□□□□□ -0.95
RNF43-202ENST00000577625 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
RNF43-202ENST00000577625 MUC7Q8TAX7 377 aa9.12□□□□□ -0.95
RNF43-202ENST00000577625 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
RNF43-202ENST00000577625 PRYO14603 147 aa9.12□□□□□ -0.95
RNF43-202ENST00000577625 C9orf116Q5BN46 136 aaPredicted RBP9.12□□□□□ -0.95
RNF43-202ENST00000577625 CSMD3Q7Z407 3707 aa9.11□□□□□ -0.95
RNF43-202ENST00000577625 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
RNF43-202ENST00000577625 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.95
RNF43-202ENST00000577625 BPY2O14599 106 aa9.1□□□□□ -0.95
RNF43-202ENST00000577625 LINC00575Q6W349 94 aa9.1□□□□□ -0.95
RNF43-202ENST00000577625 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
RNF43-202ENST00000577625 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
RNF43-202ENST00000577625 TENM2Q9NT68 2774 aa9.09□□□□□ -0.95
RNF43-202ENST00000577625 H3BQ85 93 aa9.09□□□□□ -0.95
RNF43-202ENST00000577625 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
RNF43-202ENST00000577625 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
RNF43-202ENST00000577625 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
RNF43-202ENST00000577625 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
RNF43-202ENST00000577625 LYSTQ99698 3801 aa9.07□□□□□ -0.96
RNF43-202ENST00000577625 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
RNF43-202ENST00000577625 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
RNF43-202ENST00000577625 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
RNF43-202ENST00000577625 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
RNF43-202ENST00000577625 DNAH7Q8WXX0 4024 aa9.06□□□□□ -0.96
RNF43-202ENST00000577625 Q1T7F1 81 aa9.05□□□□□ -0.96
RNF43-202ENST00000577625 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
RNF43-202ENST00000577625 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
RNF43-202ENST00000577625 CD164Q04900 197 aa9.03□□□□□ -0.96
RNF43-202ENST00000577625 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
RNF43-202ENST00000577625 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
RNF43-202ENST00000577625 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
RNF43-202ENST00000577625 UBE2DNLQ8IWF7 75 aa9.02□□□□□ -0.97
RNF43-202ENST00000577625 Q8NDZ9 215 aa9.02□□□□□ -0.97
RNF43-202ENST00000577625 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
RNF43-202ENST00000577625 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
RNF43-202ENST00000577625 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
RNF43-202ENST00000577625 Q6ZQY7 126 aa8.99□□□□□ -0.97
RNF43-202ENST00000577625 Q6ZRP5 223 aa8.98□□□□□ -0.97
RNF43-202ENST00000577625 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
RNF43-202ENST00000577625 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
RNF43-202ENST00000577625 IGKV4-1P06312 121 aa8.97□□□□□ -0.97
RNF43-202ENST00000577625 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
RNF43-202ENST00000577625 STARD9Q9P2P6 4700 aa8.96□□□□□ -0.98
RNF43-202ENST00000577625 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
RNF43-202ENST00000577625 COX7BP24311 80 aa8.93□□□□□ -0.98
RNF43-202ENST00000577625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.93□□□□□ -0.98
RNF43-202ENST00000577625 TGP01266 2768 aa8.93□□□□□ -0.98
RNF43-202ENST00000577625 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
RNF43-202ENST00000577625 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
RNF43-202ENST00000577625 VPREB1P12018 145 aa8.92□□□□□ -0.98
RNF43-202ENST00000577625 Q8N9L7 120 aa8.92□□□□□ -0.98
RNF43-202ENST00000577625 DNAH10Q8IVF4 4471 aa8.91□□□□□ -0.98
RNF43-202ENST00000577625 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
RNF43-202ENST00000577625 TRAV22A0A0B4J277 110 aa8.9□□□□□ -0.98
RNF43-202ENST00000577625 LCE6AA0A183 80 aa8.9□□□□□ -0.98
RNF43-202ENST00000577625 NBDYA0A0U1RRE5 68 aa8.9□□□□□ -0.98
RNF43-202ENST00000577625 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
RNF43-202ENST00000577625 PSPHP1O15172 72 aa8.9□□□□□ -0.98
RNF43-202ENST00000577625 M0R378 163 aa8.88□□□□□ -0.99
RNF43-202ENST00000577625 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
RNF43-202ENST00000577625 PSCAO43653 123 aa8.88□□□□□ -0.99
RNF43-202ENST00000577625 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
RNF43-202ENST00000577625 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
RNF43-202ENST00000577625 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
RNF43-202ENST00000577625 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
RNF43-202ENST00000577625 UBE2BP63146 152 aa8.84□□□□□ -0.99
RNF43-202ENST00000577625 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
RNF43-202ENST00000577625 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
RNF43-202ENST00000577625 Q6ZRN7 208 aaPredicted RBP8.83□□□□□ -1
RNF43-202ENST00000577625 ZNF73O43830 326 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms