RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 SPENQ96T58 3664 aaKnown RBP-1.17□□□□□ -2.6
CDH8-204ENST00000577536 KIF20BQ96Q89 1820 aa-1.17□□□□□ -2.6
CDH8-204ENST00000577536 UBR3Q6ZT12 1888 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 BOD1L1Q8NFC6 3051 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 CUX1P39880 1505 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 UBE2L5PA0A1B0GUS4 154 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 APOC2P02655 101 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 RPL38P63173 70 aaKnown RBP-1.18□□□□□ -2.6
CDH8-204ENST00000577536 HSD52Q0P140 79 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 CATR1Q13166 79 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 TSTD1Q8NFU3 115 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 CDC26Q8NHZ8 85 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 C1orf54Q8WWF1 131 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 PFDN5Q99471 154 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 PLXNC1O60486 1568 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 CDC42BPGQ6DT37 1551 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 CEP152O94986 1710 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 GRIN2AQ12879 1464 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 SHROOM2Q13796 1616 aa-1.18□□□□□ -2.6
CDH8-204ENST00000577536 SHPRHQ149N8 1683 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 NAP1L6A6NFF2 107 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 MIF4GDA9UHW6 222 aaKnown RBP-1.19□□□□□ -2.6
CDH8-204ENST00000577536 TMEM262E9PQX1 116 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 SAMD9Q5K651 1589 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 TIAM2Q8IVF5 1701 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 ANP32BQ92688 251 aaKnown RBP-1.19□□□□□ -2.6
CDH8-204ENST00000577536 CGREF1Q99674 301 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 MAGI2Q86UL8 1455 aa-1.19□□□□□ -2.6
CDH8-204ENST00000577536 TOPAZ1Q8N9V7 1692 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 FREM2Q5SZK8 3169 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 PHLPP1O60346 1717 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.2□□□□□ -2.6
CDH8-204ENST00000577536 SCN11AQ9UI33 1791 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 GNG14A0A1W2PPG7 69 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 COX7BP24311 80 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 ATP5EP56381 51 aaPredicted RBP-1.2□□□□□ -2.6
CDH8-204ENST00000577536 ARPC4P59998 168 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 DR1Q01658 176 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 MEIG1Q5JSS6 88 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 DEFB106AQ8N104 65 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 SERP2Q8N6R1 65 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 DPH3P1Q9H4G8 78 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 QSER1Q2KHR3 1735 aa-1.2□□□□□ -2.6
CDH8-204ENST00000577536 LYNX1G3V0Z9 82 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 IGLC2P0DOY2 106 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 IGLC3P0DOY3 106 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 DEFB130BP0DP73 79 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 DEFB130AP0DP74 79 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 ALKAL2Q6UX46 152 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 LRRC9Q6ZRR7 1453 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 WIZO95785 1651 aa-1.21□□□□□ -2.6
CDH8-204ENST00000577536 TOP2BQ02880 1626 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 SCAPERQ9BY12 1400 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 CUL7Q14999 1698 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.22□□□□□ -2.6
CDH8-204ENST00000577536 ROBO1Q9Y6N7 1651 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 MON2Q7Z3U7 1717 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 FAM24AA6NFZ4 105 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 CRYM-AS1A6NIL9 109 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 OOSP1A8MZH6 123 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 K7EP13 123 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 IFI6P09912 130 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 PMCHL1Q16048 86 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 LZICQ8WZA0 190 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.22□□□□□ -2.6
CDH8-204ENST00000577536 MAGI3Q5TCQ9 1506 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 FAM135AQ9P2D6 1515 aa-1.22□□□□□ -2.6
CDH8-204ENST00000577536 CSMD2Q7Z408 3487 aa-1.22□□□□□ -2.61
CDH8-204ENST00000577536 DEPDC5O75140 1603 aa-1.22□□□□□ -2.61
CDH8-204ENST00000577536 C5P01031 1676 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 PRUNE2Q8WUY3 3088 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 TRBV25-1A0A075B6N4 114 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 F8WEM9 126 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 KRTDAPP60985 99 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 SELENOWP63302 87 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 USP32Q8NFA0 1604 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 KTN1Q86UP2 1357 aaKnown RBP-1.23□□□□□ -2.61
CDH8-204ENST00000577536 NAIPQ13075 1403 aa-1.23□□□□□ -2.61
CDH8-204ENST00000577536 RGPD3A6NKT7 1758 aaPredicted RBP-1.24□□□□□ -2.61
CDH8-204ENST00000577536 RGPD4Q7Z3J3 1758 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 FYCO1Q9BQS8 1478 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 IGLV5-48A0A075B6I7 105 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 FAM25AB3EWG3 89 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 FAM25CB3EWG5 89 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 FAM25GB3EWG6 89 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 IAPPP10997 89 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 ASIPP42127 132 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 HMGN3Q15651 99 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 CACFD1Q9UGQ2 172 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 PAIP2BQ9ULR5 123 aaKnown RBP-1.24□□□□□ -2.61
CDH8-204ENST00000577536 ATP7BP35670 1465 aa-1.24□□□□□ -2.61
CDH8-204ENST00000577536 ABCC2Q92887 1545 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 TMEM218A2RU14 115 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 D6R8Y8 96 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 H3BQ15 152 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 MPC2O95563 127 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 MUSTN1Q8IVN3 82 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.25□□□□□ -2.61
CDH8-204ENST00000577536 TRGV9Q99603 122 aa-1.25□□□□□ -2.61
CDH8-204ENST00000577536 ZNF831Q5JPB2 1677 aa-1.26□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms