RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
SCARF1-206ENST00000573852 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
SCARF1-206ENST00000573852 ANK2Q01484 3957 aa12.47□□□□□ -0.41
SCARF1-206ENST00000573852 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
SCARF1-206ENST00000573852 SYCNQ0VAF6 134 aa12.46□□□□□ -0.41
SCARF1-206ENST00000573852 Q8N9L7 120 aa12.46□□□□□ -0.41
SCARF1-206ENST00000573852 SERTAD4-AS1Q5TG53 156 aa12.46□□□□□ -0.41
SCARF1-206ENST00000573852 LINC01556Q5JQF7 62 aa12.44□□□□□ -0.42
SCARF1-206ENST00000573852 DEFB105AQ8NG35 78 aa12.44□□□□□ -0.42
SCARF1-206ENST00000573852 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
SCARF1-206ENST00000573852 C7orf33Q8WU49 177 aa12.43□□□□□ -0.42
SCARF1-206ENST00000573852 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
SCARF1-206ENST00000573852 F8WEM9 126 aa12.42□□□□□ -0.42
SCARF1-206ENST00000573852 Q8N377 158 aa12.42□□□□□ -0.42
SCARF1-206ENST00000573852 BPY2O14599 106 aa12.42□□□□□ -0.42
SCARF1-206ENST00000573852 IGKV4-1P06312 121 aa12.41□□□□□ -0.42
SCARF1-206ENST00000573852 NREPQ16612 68 aa12.41□□□□□ -0.42
SCARF1-206ENST00000573852 EPM2AB3EWF7 344 aa12.41□□□□□ -0.42
SCARF1-206ENST00000573852 C3orf84H3BNL1 204 aa12.41□□□□□ -0.42
SCARF1-206ENST00000573852 F8WDY8 70 aa12.4□□□□□ -0.42
SCARF1-206ENST00000573852 SERP1Q9Y6X1 66 aa12.4□□□□□ -0.42
SCARF1-206ENST00000573852 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
SCARF1-206ENST00000573852 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
SCARF1-206ENST00000573852 IGLV5-48A0A075B6I7 105 aa12.35□□□□□ -0.43
SCARF1-206ENST00000573852 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
SCARF1-206ENST00000573852 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
SCARF1-206ENST00000573852 Q9BRP9 147 aa12.34□□□□□ -0.43
SCARF1-206ENST00000573852 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
SCARF1-206ENST00000573852 TMEM254Q8TBM7 123 aa12.33□□□□□ -0.44
SCARF1-206ENST00000573852 CMYA5Q8N3K9 4069 aa12.33□□□□□ -0.44
SCARF1-206ENST00000573852 DNAH10OSP0CZ25 163 aa12.33□□□□□ -0.44
SCARF1-206ENST00000573852 Q6ZRX8 168 aa12.33□□□□□ -0.44
SCARF1-206ENST00000573852 KRTAP4-16G5E9R7 235 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-206ENST00000573852 NDUFC1O43677 76 aa12.32□□□□□ -0.44
SCARF1-206ENST00000573852 TLX1NBP0CAT3 122 aa12.32□□□□□ -0.44
SCARF1-206ENST00000573852 CASC10Q5T4H9 136 aa12.32□□□□□ -0.44
SCARF1-206ENST00000573852 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
SCARF1-206ENST00000573852 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
SCARF1-206ENST00000573852 PLA2G2DQ9UNK4 145 aa12.31□□□□□ -0.44
SCARF1-206ENST00000573852 IGLV1-50A0A075B6I6 118 aa12.3□□□□□ -0.44
SCARF1-206ENST00000573852 A0A1W2PNM2 257 aa12.3□□□□□ -0.44
SCARF1-206ENST00000573852 ERC2-IT1O76042 136 aa12.3□□□□□ -0.44
SCARF1-206ENST00000573852 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
SCARF1-206ENST00000573852 KRTAP7-1Q8IUC3 87 aa12.29□□□□□ -0.44
SCARF1-206ENST00000573852 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
SCARF1-206ENST00000573852 SPRR1AP35321 89 aa12.27□□□□□ -0.44
SCARF1-206ENST00000573852 FP248Q71RG6 208 aaPredicted RBP12.27□□□□□ -0.44
SCARF1-206ENST00000573852 ETDCA0A1B0GVM5 59 aa12.27□□□□□ -0.45
SCARF1-206ENST00000573852 PRYO14603 147 aa12.27□□□□□ -0.45
SCARF1-206ENST00000573852 TNP2Q05952 138 aa12.27□□□□□ -0.45
SCARF1-206ENST00000573852 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
SCARF1-206ENST00000573852 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.45
SCARF1-206ENST00000573852 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCARF1-206ENST00000573852 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
SCARF1-206ENST00000573852 C1orf137Q5JT78 98 aa12.25□□□□□ -0.45
SCARF1-206ENST00000573852 LINC00474Q9P2X8 69 aa12.24□□□□□ -0.45
SCARF1-206ENST00000573852 LINC00588Q9Y4M8 146 aa12.24□□□□□ -0.45
SCARF1-206ENST00000573852 A0A0U1RQV1 116 aa12.24□□□□□ -0.45
SCARF1-206ENST00000573852 STAB1Q9NY15 2570 aa12.23□□□□□ -0.45
SCARF1-206ENST00000573852 PRO0628Q9UI54 55 aa12.23□□□□□ -0.45
SCARF1-206ENST00000573852 DNAH3Q8TD57 4116 aa12.22□□□□□ -0.45
SCARF1-206ENST00000573852 Q8NBF4 154 aa12.21□□□□□ -0.45
SCARF1-206ENST00000573852 SMIM26A0A096LP01 95 aa12.21□□□□□ -0.46
SCARF1-206ENST00000573852 A0A1B0GW54 56 aa12.21□□□□□ -0.46
SCARF1-206ENST00000573852 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.46
SCARF1-206ENST00000573852 SMIM29Q86T20 159 aa12.2□□□□□ -0.46
SCARF1-206ENST00000573852 MAST4O15021 2626 aa12.2□□□□□ -0.46
SCARF1-206ENST00000573852 MRPL55Q7Z7F7 128 aaKnown RBP12.2□□□□□ -0.46
SCARF1-206ENST00000573852 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
SCARF1-206ENST00000573852 SPRR4Q96PI1 79 aa12.18□□□□□ -0.46
SCARF1-206ENST00000573852 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
SCARF1-206ENST00000573852 NOTCH1P46531 2555 aa12.18□□□□□ -0.46
SCARF1-206ENST00000573852 FBN1P35555 2871 aaKnown RBP12.17□□□□□ -0.46
SCARF1-206ENST00000573852 UBE2BP63146 152 aa12.17□□□□□ -0.46
SCARF1-206ENST00000573852 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
SCARF1-206ENST00000573852 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
SCARF1-206ENST00000573852 DSCR10P59022 87 aa12.15□□□□□ -0.46
SCARF1-206ENST00000573852 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.46
SCARF1-206ENST00000573852 F8P00451 2351 aa12.13□□□□□ -0.47
SCARF1-206ENST00000573852 REG3GQ6UW15 175 aa12.12□□□□□ -0.47
SCARF1-206ENST00000573852 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
SCARF1-206ENST00000573852 A0A0G2JQZ4 141 aa12.11□□□□□ -0.47
SCARF1-206ENST00000573852 A0A1W2PNN7 141 aa12.11□□□□□ -0.47
SCARF1-206ENST00000573852 K7EQZ3 153 aa12.11□□□□□ -0.47
SCARF1-206ENST00000573852 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
SCARF1-206ENST00000573852 LINC00476Q8WZB0 136 aa12.09□□□□□ -0.47
SCARF1-206ENST00000573852 LCE6AA0A183 80 aa12.08□□□□□ -0.48
SCARF1-206ENST00000573852 MPLKIPQ8TAP9 179 aa12.08□□□□□ -0.48
SCARF1-206ENST00000573852 BRK1Q8WUW1 75 aa12.08□□□□□ -0.48
SCARF1-206ENST00000573852 DNAH10Q8IVF4 4471 aa12.07□□□□□ -0.48
SCARF1-206ENST00000573852 HUWE1Q7Z6Z7 4374 aaKnown RBP12.06□□□□□ -0.48
SCARF1-206ENST00000573852 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
SCARF1-206ENST00000573852 PRLHP81277 87 aa12.03□□□□□ -0.48
SCARF1-206ENST00000573852 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
SCARF1-206ENST00000573852 A0A096LNI7 61 aa12.03□□□□□ -0.48
SCARF1-206ENST00000573852 DEFB116Q30KQ4 102 aa12.02□□□□□ -0.49
SCARF1-206ENST00000573852 IGKV2-24A0A0C4DH68 120 aa12.01□□□□□ -0.49
SCARF1-206ENST00000573852 PSCAO43653 123 aa12.01□□□□□ -0.49
SCARF1-206ENST00000573852 ZCCHC13Q8WW36 166 aaKnown RBP12□□□□□ -0.49
SCARF1-206ENST00000573852 LYSTQ99698 3801 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms