RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SPRR1AP35321 89 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
CIITA-205ENST00000571186 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
CIITA-205ENST00000571186 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
CIITA-205ENST00000571186 TIMM17BO60830 172 aa8.27□□□□□ -1.09
CIITA-205ENST00000571186 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
CIITA-205ENST00000571186 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
CIITA-205ENST00000571186 ETDCA0A1B0GVM5 59 aa8.25□□□□□ -1.09
CIITA-205ENST00000571186 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
CIITA-205ENST00000571186 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
CIITA-205ENST00000571186 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
CIITA-205ENST00000571186 SCGB1D4Q6XE38 83 aa8.24□□□□□ -1.09
CIITA-205ENST00000571186 C5orf52A6NGY3 159 aa8.23□□□□□ -1.09
CIITA-205ENST00000571186 B5MCH6 92 aa8.23□□□□□ -1.09
CIITA-205ENST00000571186 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
CIITA-205ENST00000571186 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
CIITA-205ENST00000571186 SPANXDQ9BXN6 97 aa8.22□□□□□ -1.09
CIITA-205ENST00000571186 SPANXCQ9NY87 97 aa8.22□□□□□ -1.09
CIITA-205ENST00000571186 TRAV23DV6A0A075B6W5 121 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 AKR1D1P51857 326 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 CTAG1AP78358 180 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 S100A12P80511 92 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 OR13C6PQ8NH95 151 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
CIITA-205ENST00000571186 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
CIITA-205ENST00000571186 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
CIITA-205ENST00000571186 C3orf22Q8N5N4 141 aa8.2□□□□□ -1.1
CIITA-205ENST00000571186 Q9BRP9 147 aa8.2□□□□□ -1.1
CIITA-205ENST00000571186 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
CIITA-205ENST00000571186 MUSTN1Q8IVN3 82 aa8.18□□□□□ -1.1
CIITA-205ENST00000571186 HSBP1L1C9JCN9 74 aa8.17□□□□□ -1.1
CIITA-205ENST00000571186 Q6ZRX8 168 aa8.17□□□□□ -1.1
CIITA-205ENST00000571186 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
CIITA-205ENST00000571186 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
CIITA-205ENST00000571186 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
CIITA-205ENST00000571186 IFITM1P13164 125 aa8.14□□□□□ -1.11
CIITA-205ENST00000571186 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
CIITA-205ENST00000571186 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
CIITA-205ENST00000571186 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
CIITA-205ENST00000571186 Q6ZVH6 145 aa8.12□□□□□ -1.11
CIITA-205ENST00000571186 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CIITA-205ENST00000571186 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
CIITA-205ENST00000571186 A6NDN8 102 aa8.11□□□□□ -1.11
CIITA-205ENST00000571186 JOSD1Q15040 202 aaPredicted RBP8.11□□□□□ -1.11
CIITA-205ENST00000571186 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
CIITA-205ENST00000571186 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
CIITA-205ENST00000571186 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
CIITA-205ENST00000571186 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
CIITA-205ENST00000571186 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
CIITA-205ENST00000571186 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
CIITA-205ENST00000571186 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
CIITA-205ENST00000571186 CBY1Q9Y3M2 126 aa8.1□□□□□ -1.11
CIITA-205ENST00000571186 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
CIITA-205ENST00000571186 COX8AP10176 69 aa8.08□□□□□ -1.12
CIITA-205ENST00000571186 COX7BP24311 80 aa8.08□□□□□ -1.12
CIITA-205ENST00000571186 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
CIITA-205ENST00000571186 PAM16Q9Y3D7 125 aa8.08□□□□□ -1.12
CIITA-205ENST00000571186 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
CIITA-205ENST00000571186 Q8NBF4 154 aa8.07□□□□□ -1.12
CIITA-205ENST00000571186 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
CIITA-205ENST00000571186 KRTAP4-1Q9BYQ7 146 aa8.07□□□□□ -1.12
CIITA-205ENST00000571186 A4D1N5 150 aa8.06□□□□□ -1.12
CIITA-205ENST00000571186 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
CIITA-205ENST00000571186 MOBPQ13875 183 aa8.06□□□□□ -1.12
CIITA-205ENST00000571186 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
CIITA-205ENST00000571186 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
CIITA-205ENST00000571186 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
CIITA-205ENST00000571186 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
CIITA-205ENST00000571186 TRAV13-2A0A0B4J235 113 aa8.04□□□□□ -1.12
CIITA-205ENST00000571186 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
CIITA-205ENST00000571186 C12orf57Q99622 126 aa8.04□□□□□ -1.12
CIITA-205ENST00000571186 DLEU1O43261 78 aa8.03□□□□□ -1.12
CIITA-205ENST00000571186 SPINK1P00995 79 aa8.03□□□□□ -1.12
CIITA-205ENST00000571186 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
CIITA-205ENST00000571186 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
CIITA-205ENST00000571186 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
CIITA-205ENST00000571186 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
CIITA-205ENST00000571186 DEFB105AQ8NG35 78 aa8.01□□□□□ -1.13
CIITA-205ENST00000571186 A0A1B0GWB2 263 aa8□□□□□ -1.13
CIITA-205ENST00000571186 PYY3Q5JQD4 70 aa8□□□□□ -1.13
CIITA-205ENST00000571186 SPRR1BP22528 89 aa7.99□□□□□ -1.13
CIITA-205ENST00000571186 SLC25A34Q6PIV7 304 aa7.99□□□□□ -1.13
CIITA-205ENST00000571186 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
CIITA-205ENST00000571186 SSBP3-AS1Q7Z2R9 100 aa7.99□□□□□ -1.13
CIITA-205ENST00000571186 TAL2Q16559 108 aa7.98□□□□□ -1.13
CIITA-205ENST00000571186 Q1RN00 199 aa7.96□□□□□ -1.14
CIITA-205ENST00000571186 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
CIITA-205ENST00000571186 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
CIITA-205ENST00000571186 CFC1P0CG37 223 aa7.95□□□□□ -1.14
CIITA-205ENST00000571186 Q8N377 158 aa7.95□□□□□ -1.14
CIITA-205ENST00000571186 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
CIITA-205ENST00000571186 SMIM29Q86T20 159 aa7.94□□□□□ -1.14
CIITA-205ENST00000571186 LAMTOR3Q9UHA4 124 aa7.94□□□□□ -1.14
CIITA-205ENST00000571186 H7C2G1 150 aa7.93□□□□□ -1.14
CIITA-205ENST00000571186 SLC25A20O43772 301 aa7.93□□□□□ -1.14
CIITA-205ENST00000571186 VAMP3Q15836 100 aa7.93□□□□□ -1.14
CIITA-205ENST00000571186 HRCT1Q6UXD1 115 aa7.93□□□□□ -1.14
CIITA-205ENST00000571186 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms