RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 M0R378 163 aa5.83□□□□□ -1.48
LINC00558-201ENST00000569422 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
LINC00558-201ENST00000569422 Q6ZQY7 126 aa5.83□□□□□ -1.48
LINC00558-201ENST00000569422 ATOX1O00244 68 aa5.83□□□□□ -1.48
LINC00558-201ENST00000569422 LINC00575Q6W349 94 aa5.83□□□□□ -1.48
LINC00558-201ENST00000569422 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
LINC00558-201ENST00000569422 TRAV23DV6A0A075B6W5 121 aa5.81□□□□□ -1.48
LINC00558-201ENST00000569422 C15orf56Q8N910 161 aa5.81□□□□□ -1.48
LINC00558-201ENST00000569422 A8MUN3 132 aa5.8□□□□□ -1.48
LINC00558-201ENST00000569422 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
LINC00558-201ENST00000569422 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
LINC00558-201ENST00000569422 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
LINC00558-201ENST00000569422 CCKP06307 115 aa5.8□□□□□ -1.48
LINC00558-201ENST00000569422 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
LINC00558-201ENST00000569422 JMJD7-PLA2G4BH0Y9G9 81 aa5.79□□□□□ -1.48
LINC00558-201ENST00000569422 M0R2N4 97 aa5.79□□□□□ -1.48
LINC00558-201ENST00000569422 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
LINC00558-201ENST00000569422 EGFEM1PQ0D2K5 195 aa5.79□□□□□ -1.48
LINC00558-201ENST00000569422 Q6ZRP5 223 aa5.79□□□□□ -1.48
LINC00558-201ENST00000569422 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
LINC00558-201ENST00000569422 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
LINC00558-201ENST00000569422 COX7BP24311 80 aa5.78□□□□□ -1.48
LINC00558-201ENST00000569422 CASC10Q5T4H9 136 aa5.78□□□□□ -1.48
LINC00558-201ENST00000569422 GVQW2A0A096LPI5 108 aaPredicted RBP5.77□□□□□ -1.49
LINC00558-201ENST00000569422 NDUFS5O43920 106 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 Q75L30 129 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 H3BNG1 76 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 DEFB105AQ8NG35 78 aa5.77□□□□□ -1.49
LINC00558-201ENST00000569422 LINC01556Q5JQF7 62 aa5.76□□□□□ -1.49
LINC00558-201ENST00000569422 LINC00474Q9P2X8 69 aa5.76□□□□□ -1.49
LINC00558-201ENST00000569422 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
LINC00558-201ENST00000569422 HAMPP81172 84 aa5.76□□□□□ -1.49
LINC00558-201ENST00000569422 CMYA5Q8N3K9 4069 aa5.76□□□□□ -1.49
LINC00558-201ENST00000569422 PLA2G1BP04054 148 aaKnown RBP5.75□□□□□ -1.49
LINC00558-201ENST00000569422 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
LINC00558-201ENST00000569422 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
LINC00558-201ENST00000569422 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
LINC00558-201ENST00000569422 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
LINC00558-201ENST00000569422 Q6JHZ5 121 aa5.75□□□□□ -1.49
LINC00558-201ENST00000569422 FAM168BA1KXE4 195 aa5.74□□□□□ -1.49
LINC00558-201ENST00000569422 MUC7Q8TAX7 377 aa5.74□□□□□ -1.49
LINC00558-201ENST00000569422 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
LINC00558-201ENST00000569422 Q6ZQT0 140 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 SCXQ7RTU7 201 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 STAB2Q8WWQ8 2551 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 TRAV10A0A0B4J240 114 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 PHF5AQ7RTV0 110 aaKnown RBP5.73□□□□□ -1.49
LINC00558-201ENST00000569422 H0Y9J4 135 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 LINC00313P59037 77 aa5.73□□□□□ -1.49
LINC00558-201ENST00000569422 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
LINC00558-201ENST00000569422 K7EIL1 84 aa5.72□□□□□ -1.49
LINC00558-201ENST00000569422 LCA10Q71F78 164 aa5.72□□□□□ -1.49
LINC00558-201ENST00000569422 LYSTQ99698 3801 aa5.72□□□□□ -1.49
LINC00558-201ENST00000569422 DNAH10OSP0CZ25 163 aa5.71□□□□□ -1.5
LINC00558-201ENST00000569422 Q6ZVQ6 151 aa5.71□□□□□ -1.5
LINC00558-201ENST00000569422 C7orf33Q8WU49 177 aa5.71□□□□□ -1.5
LINC00558-201ENST00000569422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
LINC00558-201ENST00000569422 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
LINC00558-201ENST00000569422 IGKV2-24A0A0C4DH68 120 aa5.68□□□□□ -1.5
LINC00558-201ENST00000569422 C3orf84H3BNL1 204 aa5.68□□□□□ -1.5
LINC00558-201ENST00000569422 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
LINC00558-201ENST00000569422 MP68P56378 58 aa5.68□□□□□ -1.5
LINC00558-201ENST00000569422 LINC01547P58512 204 aaPredicted RBP5.67□□□□□ -1.5
LINC00558-201ENST00000569422 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.67□□□□□ -1.5
LINC00558-201ENST00000569422 LOC110117498A0A087WWA1 95 aa5.67□□□□□ -1.5
LINC00558-201ENST00000569422 PSCAO43653 123 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 Q8N9L7 120 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 HUWE1Q7Z6Z7 4374 aaKnown RBP5.66□□□□□ -1.5
LINC00558-201ENST00000569422 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 H7BZZ5 65 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 UBE2DNLQ8IWF7 75 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 ST20-AS1Q8NBB2 130 aa5.66□□□□□ -1.5
LINC00558-201ENST00000569422 UBE2BP63146 152 aa5.65□□□□□ -1.51
LINC00558-201ENST00000569422 KCNQ1DNQ9H478 68 aa5.65□□□□□ -1.51
LINC00558-201ENST00000569422 DNAH3Q8TD57 4116 aa5.64□□□□□ -1.51
LINC00558-201ENST00000569422 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
LINC00558-201ENST00000569422 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
LINC00558-201ENST00000569422 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
LINC00558-201ENST00000569422 RMI2Q96E14 147 aa5.64□□□□□ -1.51
LINC00558-201ENST00000569422 DNAH10Q8IVF4 4471 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 PDE6GP18545 87 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
LINC00558-201ENST00000569422 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 Q8N377 158 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 Q9BRP9 147 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
LINC00558-201ENST00000569422 ERC2-IT1O76042 136 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 C7orf65Q6ZTY9 151 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 H3BQ85 93 aa5.62□□□□□ -1.51
LINC00558-201ENST00000569422 NREPQ16612 68 aa5.61□□□□□ -1.51
LINC00558-201ENST00000569422 Q6ZRX8 168 aa5.61□□□□□ -1.51
LINC00558-201ENST00000569422 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
LINC00558-201ENST00000569422 A0A096LNI7 61 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms