RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 COX7CP15954 63 aa10.07□□□□□ -0.8
SNX20-204ENST00000568993 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
SNX20-204ENST00000568993 TRBV7-6A0A0J9YX20 115 aa10.07□□□□□ -0.8
SNX20-204ENST00000568993 PSCAO43653 123 aa10.07□□□□□ -0.8
SNX20-204ENST00000568993 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
SNX20-204ENST00000568993 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
SNX20-204ENST00000568993 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
SNX20-204ENST00000568993 IGLV5-37A0A075B6J1 123 aa10.06□□□□□ -0.8
SNX20-204ENST00000568993 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
SNX20-204ENST00000568993 VPS13DQ5THJ4 4388 aa10.05□□□□□ -0.8
SNX20-204ENST00000568993 ZNF73O43830 326 aaPredicted RBP10.05□□□□□ -0.8
SNX20-204ENST00000568993 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
SNX20-204ENST00000568993 ORMDL1Q9P0S3 153 aa10.05□□□□□ -0.8
SNX20-204ENST00000568993 DNAH10Q8IVF4 4471 aa10.04□□□□□ -0.8
SNX20-204ENST00000568993 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
SNX20-204ENST00000568993 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
SNX20-204ENST00000568993 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
SNX20-204ENST00000568993 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.8
SNX20-204ENST00000568993 FAM236CP0DP71 79 aa10.02□□□□□ -0.8
SNX20-204ENST00000568993 hADV29S1A0JD25 119 aa10.02□□□□□ -0.81
SNX20-204ENST00000568993 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
SNX20-204ENST00000568993 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
SNX20-204ENST00000568993 ELOF1P60002 83 aaKnown RBP10.01□□□□□ -0.81
SNX20-204ENST00000568993 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
SNX20-204ENST00000568993 LRCOL1A6NCL2 159 aa10□□□□□ -0.81
SNX20-204ENST00000568993 COX7BP24311 80 aa10□□□□□ -0.81
SNX20-204ENST00000568993 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
SNX20-204ENST00000568993 TMEM256-PLSCR3K7ERE1 68 aa10□□□□□ -0.81
SNX20-204ENST00000568993 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
SNX20-204ENST00000568993 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
SNX20-204ENST00000568993 FBN3Q75N90 2809 aa9.99□□□□□ -0.81
SNX20-204ENST00000568993 FAM168BA1KXE4 195 aa9.98□□□□□ -0.81
SNX20-204ENST00000568993 DSCR8Q96T75 97 aa9.97□□□□□ -0.81
SNX20-204ENST00000568993 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
SNX20-204ENST00000568993 H3BQ85 93 aa9.97□□□□□ -0.81
SNX20-204ENST00000568993 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
SNX20-204ENST00000568993 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
SNX20-204ENST00000568993 FAM19A1Q7Z5A9 133 aa9.95□□□□□ -0.82
SNX20-204ENST00000568993 ACYP1P07311 99 aa9.95□□□□□ -0.82
SNX20-204ENST00000568993 A0A096LNI7 61 aa9.94□□□□□ -0.82
SNX20-204ENST00000568993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.94□□□□□ -0.82
SNX20-204ENST00000568993 Q6ZR54 194 aa9.94□□□□□ -0.82
SNX20-204ENST00000568993 PRYO14603 147 aa9.94□□□□□ -0.82
SNX20-204ENST00000568993 CYSTM1Q9H1C7 97 aa9.94□□□□□ -0.82
SNX20-204ENST00000568993 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.93□□□□□ -0.82
SNX20-204ENST00000568993 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
SNX20-204ENST00000568993 SPRR1AP35321 89 aa9.93□□□□□ -0.82
SNX20-204ENST00000568993 Q6ZQY7 126 aa9.93□□□□□ -0.82
SNX20-204ENST00000568993 MRPL55Q7Z7F7 128 aaKnown RBP9.93□□□□□ -0.82
SNX20-204ENST00000568993 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
SNX20-204ENST00000568993 EPM2AB3EWF7 344 aa9.92□□□□□ -0.82
SNX20-204ENST00000568993 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
SNX20-204ENST00000568993 M0R2N4 97 aa9.92□□□□□ -0.82
SNX20-204ENST00000568993 GHRHP01286 108 aa9.92□□□□□ -0.82
SNX20-204ENST00000568993 ATOX1O00244 68 aa9.9□□□□□ -0.82
SNX20-204ENST00000568993 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
SNX20-204ENST00000568993 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
SNX20-204ENST00000568993 HIST1H4AP62805 103 aaKnown RBP9.9□□□□□ -0.82
SNX20-204ENST00000568993 WWC2-AS2Q96NR7 200 aa9.88□□□□□ -0.83
SNX20-204ENST00000568993 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
SNX20-204ENST00000568993 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
SNX20-204ENST00000568993 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
SNX20-204ENST00000568993 Q6ZRX8 168 aa9.87□□□□□ -0.83
SNX20-204ENST00000568993 A0A087WTM6 91 aa9.86□□□□□ -0.83
SNX20-204ENST00000568993 LINC00643Q86TS7 51 aa9.86□□□□□ -0.83
SNX20-204ENST00000568993 DHRS4-AS1Q9P1J3 65 aa9.86□□□□□ -0.83
SNX20-204ENST00000568993 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
SNX20-204ENST00000568993 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
SNX20-204ENST00000568993 ETDCA0A1B0GVM5 59 aa9.84□□□□□ -0.83
SNX20-204ENST00000568993 CCKP06307 115 aa9.84□□□□□ -0.83
SNX20-204ENST00000568993 TGP01266 2768 aa9.84□□□□□ -0.83
SNX20-204ENST00000568993 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
SNX20-204ENST00000568993 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
SNX20-204ENST00000568993 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
SNX20-204ENST00000568993 REG3GQ6UW15 175 aa9.83□□□□□ -0.84
SNX20-204ENST00000568993 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
SNX20-204ENST00000568993 Q9BRP9 147 aa9.82□□□□□ -0.84
SNX20-204ENST00000568993 LOC110117498A0A087WWA1 95 aa9.82□□□□□ -0.84
SNX20-204ENST00000568993 A0A0U1RQV1 116 aa9.82□□□□□ -0.84
SNX20-204ENST00000568993 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
SNX20-204ENST00000568993 C1orf134Q5TEV5 83 aa9.81□□□□□ -0.84
SNX20-204ENST00000568993 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
SNX20-204ENST00000568993 DNAH2Q9P225 4427 aa9.81□□□□□ -0.84
SNX20-204ENST00000568993 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
SNX20-204ENST00000568993 SERP1Q9Y6X1 66 aa9.8□□□□□ -0.84
SNX20-204ENST00000568993 LY6G6CO95867 125 aa9.8□□□□□ -0.84
SNX20-204ENST00000568993 SMCR5Q8TEV8 140 aa9.8□□□□□ -0.84
SNX20-204ENST00000568993 PDE6GP18545 87 aa9.79□□□□□ -0.84
SNX20-204ENST00000568993 Q6ZQT0 140 aa9.79□□□□□ -0.84
SNX20-204ENST00000568993 CD164Q04900 197 aa9.78□□□□□ -0.84
SNX20-204ENST00000568993 LINC01547P58512 204 aaPredicted RBP9.78□□□□□ -0.84
SNX20-204ENST00000568993 PMAIP1Q13794 54 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 C3orf84H3BNL1 204 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 Q8N377 158 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 BRK1Q8WUW1 75 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 LINC00846Q9NV44 126 aa9.77□□□□□ -0.85
SNX20-204ENST00000568993 TRBV7-4A0A0J9YYF1 115 aa9.76□□□□□ -0.85
SNX20-204ENST00000568993 PHF5AQ7RTV0 110 aaKnown RBP9.76□□□□□ -0.85
SNX20-204ENST00000568993 DNAH17Q9UFH2 4485 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms