RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
COMMD4-223ENST00000568301 IGKCP01834 107 aa8.43□□□□□ -1.06
COMMD4-223ENST00000568301 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
COMMD4-223ENST00000568301 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
COMMD4-223ENST00000568301 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
COMMD4-223ENST00000568301 H0Y8G0 127 aa8.42□□□□□ -1.06
COMMD4-223ENST00000568301 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
COMMD4-223ENST00000568301 B5MCH6 92 aa8.41□□□□□ -1.06
COMMD4-223ENST00000568301 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
COMMD4-223ENST00000568301 Q8N377 158 aa8.41□□□□□ -1.06
COMMD4-223ENST00000568301 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
COMMD4-223ENST00000568301 C20orf202A1L168 122 aa8.4□□□□□ -1.06
COMMD4-223ENST00000568301 TRBV10-2A0A0K0K1G8 114 aa8.39□□□□□ -1.07
COMMD4-223ENST00000568301 SLC25A20O43772 301 aa8.39□□□□□ -1.07
COMMD4-223ENST00000568301 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
COMMD4-223ENST00000568301 KRTDAPP60985 99 aa8.39□□□□□ -1.07
COMMD4-223ENST00000568301 MOBPQ13875 183 aa8.39□□□□□ -1.07
COMMD4-223ENST00000568301 IGLV9-49A0A0B4J1Y8 123 aa8.38□□□□□ -1.07
COMMD4-223ENST00000568301 HERVK_113P61574 105 aa8.38□□□□□ -1.07
COMMD4-223ENST00000568301 LEPROTO15243 131 aa8.37□□□□□ -1.07
COMMD4-223ENST00000568301 DDTP30046 118 aa8.37□□□□□ -1.07
COMMD4-223ENST00000568301 Q6ZRX8 168 aa8.37□□□□□ -1.07
COMMD4-223ENST00000568301 PMCHL2Q9BQD1 86 aa8.37□□□□□ -1.07
COMMD4-223ENST00000568301 Q9BRP9 147 aa8.37□□□□□ -1.07
COMMD4-223ENST00000568301 XP32Q5T750 250 aa8.36□□□□□ -1.07
COMMD4-223ENST00000568301 E9PLD3 99 aa8.35□□□□□ -1.07
COMMD4-223ENST00000568301 NMUP48645 174 aa8.34□□□□□ -1.07
COMMD4-223ENST00000568301 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
COMMD4-223ENST00000568301 J3QQQ9 107 aa8.32□□□□□ -1.08
COMMD4-223ENST00000568301 NDUFC2O95298 119 aa8.32□□□□□ -1.08
COMMD4-223ENST00000568301 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
COMMD4-223ENST00000568301 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
COMMD4-223ENST00000568301 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
COMMD4-223ENST00000568301 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
COMMD4-223ENST00000568301 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
COMMD4-223ENST00000568301 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
COMMD4-223ENST00000568301 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
COMMD4-223ENST00000568301 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
COMMD4-223ENST00000568301 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
COMMD4-223ENST00000568301 SCGB1D1O95968 90 aa8.28□□□□□ -1.08
COMMD4-223ENST00000568301 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
COMMD4-223ENST00000568301 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
COMMD4-223ENST00000568301 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
COMMD4-223ENST00000568301 KRTAP19-2Q3LHN2 52 aa8.25□□□□□ -1.09
COMMD4-223ENST00000568301 ST20-AS1Q8NBB2 130 aa8.25□□□□□ -1.09
COMMD4-223ENST00000568301 CBY1Q9Y3M2 126 aa8.25□□□□□ -1.09
COMMD4-223ENST00000568301 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
COMMD4-223ENST00000568301 ANKRD39Q53RE8 183 aa8.24□□□□□ -1.09
COMMD4-223ENST00000568301 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
COMMD4-223ENST00000568301 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
COMMD4-223ENST00000568301 TIMM17BO60830 172 aa8.23□□□□□ -1.09
COMMD4-223ENST00000568301 MT1HP80294 61 aa8.23□□□□□ -1.09
COMMD4-223ENST00000568301 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
COMMD4-223ENST00000568301 A0A0J9YXY3 114 aa8.22□□□□□ -1.09
COMMD4-223ENST00000568301 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
COMMD4-223ENST00000568301 SPRR1BP22528 89 aa8.22□□□□□ -1.09
COMMD4-223ENST00000568301 SLC25A34Q6PIV7 304 aa8.22□□□□□ -1.09
COMMD4-223ENST00000568301 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
COMMD4-223ENST00000568301 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
COMMD4-223ENST00000568301 NPC2P61916 151 aa8.2□□□□□ -1.1
COMMD4-223ENST00000568301 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
COMMD4-223ENST00000568301 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
COMMD4-223ENST00000568301 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
COMMD4-223ENST00000568301 Q6ZVH6 145 aa8.18□□□□□ -1.1
COMMD4-223ENST00000568301 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 DLEU1O43261 78 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 LITAFQ99732 161 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 LAMTOR3Q9UHA4 124 aa8.17□□□□□ -1.1
COMMD4-223ENST00000568301 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
COMMD4-223ENST00000568301 HRCT1Q6UXD1 115 aa8.16□□□□□ -1.1
COMMD4-223ENST00000568301 SCGB1D4Q6XE38 83 aa8.16□□□□□ -1.1
COMMD4-223ENST00000568301 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
COMMD4-223ENST00000568301 COX8AP10176 69 aa8.15□□□□□ -1.1
COMMD4-223ENST00000568301 CD164Q04900 197 aa8.15□□□□□ -1.1
COMMD4-223ENST00000568301 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.1
COMMD4-223ENST00000568301 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
COMMD4-223ENST00000568301 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
COMMD4-223ENST00000568301 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
COMMD4-223ENST00000568301 IFITM1P13164 125 aa8.14□□□□□ -1.11
COMMD4-223ENST00000568301 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
COMMD4-223ENST00000568301 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
COMMD4-223ENST00000568301 SPATA45Q537H7 98 aa8.13□□□□□ -1.11
COMMD4-223ENST00000568301 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
COMMD4-223ENST00000568301 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
COMMD4-223ENST00000568301 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
COMMD4-223ENST00000568301 COX7BP24311 80 aa8.11□□□□□ -1.11
COMMD4-223ENST00000568301 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
COMMD4-223ENST00000568301 TAL2Q16559 108 aa8.11□□□□□ -1.11
COMMD4-223ENST00000568301 Q5XG85 94 aa8.11□□□□□ -1.11
COMMD4-223ENST00000568301 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
COMMD4-223ENST00000568301 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
COMMD4-223ENST00000568301 C6orf99Q4VX62 202 aa8.09□□□□□ -1.11
COMMD4-223ENST00000568301 HIGD1BQ9P298 99 aa8.09□□□□□ -1.11
COMMD4-223ENST00000568301 H7C2G1 150 aa8.08□□□□□ -1.12
COMMD4-223ENST00000568301 Q1RN00 199 aa8.08□□□□□ -1.12
COMMD4-223ENST00000568301 DEFB105AQ8NG35 78 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms