RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 FBN3Q75N90 2809 aa15.38■□□□□ 0.05
LINC00543-201ENST00000567234 NDUFC1O43677 76 aa15.38■□□□□ 0.05
LINC00543-201ENST00000567234 ATP5EP56381 51 aaPredicted RBP15.38■□□□□ 0.05
LINC00543-201ENST00000567234 PRR3P79522 188 aaKnown RBP15.37■□□□□ 0.05
LINC00543-201ENST00000567234 SLPIP03973 132 aa15.36■□□□□ 0.05
LINC00543-201ENST00000567234 C4orf26Q17RF5 130 aa15.36■□□□□ 0.05
LINC00543-201ENST00000567234 RMI2Q96E14 147 aa15.36■□□□□ 0.05
LINC00543-201ENST00000567234 Q6ZRU5 148 aa15.36■□□□□ 0.05
LINC00543-201ENST00000567234 Q8NDZ9 215 aa15.35■□□□□ 0.05
LINC00543-201ENST00000567234 TRAV23DV6A0A075B6W5 121 aa15.34■□□□□ 0.05
LINC00543-201ENST00000567234 CXCL6P80162 114 aa15.34■□□□□ 0.05
LINC00543-201ENST00000567234 C20orf197Q8N268 126 aa15.33■□□□□ 0.04
LINC00543-201ENST00000567234 H7BZZ5 65 aa15.32■□□□□ 0.04
LINC00543-201ENST00000567234 HRCT1Q6UXD1 115 aa15.32■□□□□ 0.04
LINC00543-201ENST00000567234 Q6ZQT0 140 aa15.31■□□□□ 0.04
LINC00543-201ENST00000567234 FAM19A1Q7Z5A9 133 aa15.31■□□□□ 0.04
LINC00543-201ENST00000567234 RBM3P98179 157 aaKnown RBP15.3■□□□□ 0.04
LINC00543-201ENST00000567234 SYCNQ0VAF6 134 aa15.3■□□□□ 0.04
LINC00543-201ENST00000567234 PRO0628Q9UI54 55 aa15.3■□□□□ 0.04
LINC00543-201ENST00000567234 SMIM26A0A096LP01 95 aa15.29■□□□□ 0.04
LINC00543-201ENST00000567234 IGLV6-57P01721 117 aa15.28■□□□□ 0.04
LINC00543-201ENST00000567234 LINC00575Q6W349 94 aa15.27■□□□□ 0.04
LINC00543-201ENST00000567234 XAGE1AQ9HD64 81 aa15.27■□□□□ 0.04
LINC00543-201ENST00000567234 APLNQ9ULZ1 77 aa15.27■□□□□ 0.04
LINC00543-201ENST00000567234 ERC2-IT1O76042 136 aa15.24■□□□□ 0.03
LINC00543-201ENST00000567234 LINC01547P58512 204 aaPredicted RBP15.23■□□□□ 0.03
LINC00543-201ENST00000567234 VPREB1P12018 145 aa15.22■□□□□ 0.03
LINC00543-201ENST00000567234 CSMD3Q7Z407 3707 aa15.22■□□□□ 0.03
LINC00543-201ENST00000567234 TLX1NBP0CAT3 122 aa15.22■□□□□ 0.03
LINC00543-201ENST00000567234 C6orf99Q4VX62 202 aa15.22■□□□□ 0.03
LINC00543-201ENST00000567234 TGP01266 2768 aa15.21■□□□□ 0.02
LINC00543-201ENST00000567234 Q6ZRP5 223 aa15.2■□□□□ 0.02
LINC00543-201ENST00000567234 UBE2DNLQ8IWF7 75 aa15.19■□□□□ 0.02
LINC00543-201ENST00000567234 NUPR2A6NF83 97 aa15.18■□□□□ 0.02
LINC00543-201ENST00000567234 M0R378 163 aa15.18■□□□□ 0.02
LINC00543-201ENST00000567234 CASC10Q5T4H9 136 aa15.18■□□□□ 0.02
LINC00543-201ENST00000567234 Q6ZVQ6 151 aa15.18■□□□□ 0.02
LINC00543-201ENST00000567234 DYNC2H1Q8NCM8 4307 aaKnown RBP15.17■□□□□ 0.02
LINC00543-201ENST00000567234 DNAH1Q9P2D7 4330 aa15.17■□□□□ 0.02
LINC00543-201ENST00000567234 DNAH7Q8WXX0 4024 aa15.15■□□□□ 0.02
LINC00543-201ENST00000567234 LAMTOR3Q9UHA4 124 aa15.13■□□□□ 0.01
LINC00543-201ENST00000567234 TRBV7-6A0A0J9YX20 115 aa15.12■□□□□ 0.01
LINC00543-201ENST00000567234 DIRC1Q969H9 104 aa15.12■□□□□ 0.01
LINC00543-201ENST00000567234 KRTAP1-5Q9BYS1 174 aa15.12■□□□□ 0.01
LINC00543-201ENST00000567234 PLA2G2DQ9UNK4 145 aa15.12■□□□□ 0.01
LINC00543-201ENST00000567234 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.1■□□□□ 0.01
LINC00543-201ENST00000567234 TRBV7-4A0A0J9YYF1 115 aa15.09■□□□□ 0.01
LINC00543-201ENST00000567234 ZNF73O43830 326 aaPredicted RBP15.09■□□□□ 0.01
LINC00543-201ENST00000567234 HAMPP81172 84 aa15.08■□□□□ 0.01
LINC00543-201ENST00000567234 LYSTQ99698 3801 aa15.08■□□□□ 0.01
LINC00543-201ENST00000567234 STARD9Q9P2P6 4700 aa15.07■□□□□ 0
LINC00543-201ENST00000567234 F8WEM9 126 aa15.06■□□□□ 0
LINC00543-201ENST00000567234 TENM2Q9NT68 2774 aa15.05■□□□□ 0
LINC00543-201ENST00000567234 LINC00336Q6ZUF6 198 aa15.05■□□□□ -0
LINC00543-201ENST00000567234 NKAPP1Q8N9T2 125 aa15.05■□□□□ -0
LINC00543-201ENST00000567234 IGLV5-37A0A075B6J1 123 aa15.03■□□□□ -0
LINC00543-201ENST00000567234 COX7BP24311 80 aa15.03■□□□□ -0
LINC00543-201ENST00000567234 ELOF1P60002 83 aaKnown RBP15.03■□□□□ -0
LINC00543-201ENST00000567234 PSCAO43653 123 aa15.03■□□□□ -0
LINC00543-201ENST00000567234 FP248Q71RG6 208 aaPredicted RBP15.03■□□□□ -0
LINC00543-201ENST00000567234 PLECQ15149 4684 aaKnown RBP15.02■□□□□ -0
LINC00543-201ENST00000567234 SERTAD4-AS1Q5TG53 156 aa15.01□□□□□ -0.01
LINC00543-201ENST00000567234 CNBPP62633 177 aaKnown RBP15.01□□□□□ -0.01
LINC00543-201ENST00000567234 C14orf177Q52M58 125 aa15.01□□□□□ -0.01
LINC00543-201ENST00000567234 KCNQ1DNQ9H478 68 aa15□□□□□ -0.01
LINC00543-201ENST00000567234 Q6ZQY7 126 aa14.99□□□□□ -0.01
LINC00543-201ENST00000567234 NBDYA0A0U1RRE5 68 aa14.98□□□□□ -0.01
LINC00543-201ENST00000567234 NREPQ16612 68 aa14.98□□□□□ -0.01
LINC00543-201ENST00000567234 C7orf33Q8WU49 177 aa14.98□□□□□ -0.01
LINC00543-201ENST00000567234 SNURFQ9Y675 71 aa14.97□□□□□ -0.01
LINC00543-201ENST00000567234 TMEM254Q8TBM7 123 aa14.96□□□□□ -0.01
LINC00543-201ENST00000567234 LINC00528Q8N1L1 170 aa14.95□□□□□ -0.02
LINC00543-201ENST00000567234 WWC2-AS2Q96NR7 200 aa14.94□□□□□ -0.02
LINC00543-201ENST00000567234 A0A1B0GW54 56 aa14.93□□□□□ -0.02
LINC00543-201ENST00000567234 BPY2O14599 106 aa14.93□□□□□ -0.02
LINC00543-201ENST00000567234 M0R2N4 97 aa14.92□□□□□ -0.02
LINC00543-201ENST00000567234 FAM168BA1KXE4 195 aa14.9□□□□□ -0.02
LINC00543-201ENST00000567234 PRYO14603 147 aa14.9□□□□□ -0.02
LINC00543-201ENST00000567234 IGLV1-50A0A075B6I6 118 aa14.89□□□□□ -0.03
LINC00543-201ENST00000567234 KRTAP7-1Q8IUC3 87 aa14.89□□□□□ -0.03
LINC00543-201ENST00000567234 C16orf90A8MZG2 172 aa14.89□□□□□ -0.03
LINC00543-201ENST00000567234 A0A0U1RQV1 116 aa14.88□□□□□ -0.03
LINC00543-201ENST00000567234 LRCOL1A6NCL2 159 aa14.87□□□□□ -0.03
LINC00543-201ENST00000567234 Q6ZRN7 208 aaPredicted RBP14.87□□□□□ -0.03
LINC00543-201ENST00000567234 MRPL55Q7Z7F7 128 aaKnown RBP14.87□□□□□ -0.03
LINC00543-201ENST00000567234 SPRR1AP35321 89 aa14.85□□□□□ -0.03
LINC00543-201ENST00000567234 OCR1Q9BZK8 76 aa14.85□□□□□ -0.03
LINC00543-201ENST00000567234 PKIGQ9Y2B9 76 aa14.85□□□□□ -0.03
LINC00543-201ENST00000567234 A0A096LNI7 61 aa14.83□□□□□ -0.04
LINC00543-201ENST00000567234 KRTAP4-16G5E9R7 235 aaPredicted RBP14.83□□□□□ -0.04
LINC00543-201ENST00000567234 RPL37AP8A6NKH3 93 aa14.82□□□□□ -0.04
LINC00543-201ENST00000567234 DNAH10Q8IVF4 4471 aa14.81□□□□□ -0.04
LINC00543-201ENST00000567234 IGKV4-1P06312 121 aa14.8□□□□□ -0.04
LINC00543-201ENST00000567234 FUSP35637 526 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00543-201ENST00000567234 DHRS4-AS1Q9P1J3 65 aa14.8□□□□□ -0.04
LINC00543-201ENST00000567234 VPS13DQ5THJ4 4388 aa14.8□□□□□ -0.04
LINC00543-201ENST00000567234 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.8□□□□□ -0.04
LINC00543-201ENST00000567234 Q6ZRX8 168 aa14.8□□□□□ -0.04
LINC00543-201ENST00000567234 C9orf163Q8N9P6 203 aa14.8□□□□□ -0.04
LINC00543-201ENST00000567234 ETDCA0A1B0GVM5 59 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms