RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 LBHQ53QV2 105 aaPredicted RBP5.62□□□□□ -1.51
SMPD3-207ENST00000566466 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
SMPD3-207ENST00000566466 TMEM126AQ9H061 195 aa5.62□□□□□ -1.51
SMPD3-207ENST00000566466 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
SMPD3-207ENST00000566466 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
SMPD3-207ENST00000566466 UBE2BP63146 152 aa5.61□□□□□ -1.51
SMPD3-207ENST00000566466 TAL2Q16559 108 aa5.61□□□□□ -1.51
SMPD3-207ENST00000566466 HIST1H4GQ99525 98 aa5.61□□□□□ -1.51
SMPD3-207ENST00000566466 TNXBP22105 4242 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 PRYO14603 147 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 IGLV7-43P04211 117 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 CFC1BP0CG36 223 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 CFC1P0CG37 223 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 DDTP30046 118 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 HSD52Q0P140 79 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 CEND1Q8N111 149 aa5.6□□□□□ -1.51
SMPD3-207ENST00000566466 BCE1O60756 84 aa5.59□□□□□ -1.51
SMPD3-207ENST00000566466 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
SMPD3-207ENST00000566466 TRAV23DV6A0A075B6W5 121 aa5.58□□□□□ -1.52
SMPD3-207ENST00000566466 A0A1B0GWB2 263 aa5.58□□□□□ -1.52
SMPD3-207ENST00000566466 PLA2G1BP04054 148 aaKnown RBP5.58□□□□□ -1.52
SMPD3-207ENST00000566466 PRLHP81277 87 aa5.58□□□□□ -1.52
SMPD3-207ENST00000566466 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
SMPD3-207ENST00000566466 CTAG1AP78358 180 aa5.57□□□□□ -1.52
SMPD3-207ENST00000566466 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
SMPD3-207ENST00000566466 B5MCH6 92 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 K7ERJ3 54 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
SMPD3-207ENST00000566466 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 SMIM11BQ8TCY0 68 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 Q9BRP9 147 aa5.56□□□□□ -1.52
SMPD3-207ENST00000566466 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
SMPD3-207ENST00000566466 ZNF861PO60384 105 aa5.55□□□□□ -1.52
SMPD3-207ENST00000566466 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
SMPD3-207ENST00000566466 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 TSTD3H0UI37 97 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 H0Y9J4 135 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
SMPD3-207ENST00000566466 Q6ZRX8 168 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
SMPD3-207ENST00000566466 A6NDN8 102 aa5.53□□□□□ -1.52
SMPD3-207ENST00000566466 ELOF1P60002 83 aaKnown RBP5.53□□□□□ -1.52
SMPD3-207ENST00000566466 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
SMPD3-207ENST00000566466 SPINK6Q6UWN8 80 aa5.53□□□□□ -1.52
SMPD3-207ENST00000566466 FAM19A1Q7Z5A9 133 aa5.53□□□□□ -1.52
SMPD3-207ENST00000566466 INAFM2P0DMQ5 153 aa5.52□□□□□ -1.53
SMPD3-207ENST00000566466 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
SMPD3-207ENST00000566466 HINT1P49773 126 aaPredicted RBP5.52□□□□□ -1.53
SMPD3-207ENST00000566466 NHP2Q9NX24 153 aaKnown RBP5.52□□□□□ -1.53
SMPD3-207ENST00000566466 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
SMPD3-207ENST00000566466 UBE2AP49459 152 aa5.51□□□□□ -1.53
SMPD3-207ENST00000566466 DIRC1Q969H9 104 aa5.51□□□□□ -1.53
SMPD3-207ENST00000566466 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
SMPD3-207ENST00000566466 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
SMPD3-207ENST00000566466 TSPAN13O95857 204 aa5.5□□□□□ -1.53
SMPD3-207ENST00000566466 FAM218AQ96MZ4 157 aa5.5□□□□□ -1.53
SMPD3-207ENST00000566466 PRO1854Q9UHT4 67 aa5.5□□□□□ -1.53
SMPD3-207ENST00000566466 COX7BP24311 80 aa5.49□□□□□ -1.53
SMPD3-207ENST00000566466 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
SMPD3-207ENST00000566466 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
SMPD3-207ENST00000566466 H7C2G1 150 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 TRIAP1O43715 76 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 RAB37Q96AX2 223 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 SPRR4Q96PI1 79 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
SMPD3-207ENST00000566466 A0A087X002 238 aa5.47□□□□□ -1.53
SMPD3-207ENST00000566466 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
SMPD3-207ENST00000566466 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.54
SMPD3-207ENST00000566466 M0R143 59 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 LINC00483Q53H64 154 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 LINC00575Q6W349 94 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 LINC01600Q96MT4 127 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
SMPD3-207ENST00000566466 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
SMPD3-207ENST00000566466 TAX1BP3O14907 124 aa5.44□□□□□ -1.54
SMPD3-207ENST00000566466 SPRR1BP22528 89 aa5.44□□□□□ -1.54
SMPD3-207ENST00000566466 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
SMPD3-207ENST00000566466 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
SMPD3-207ENST00000566466 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
SMPD3-207ENST00000566466 IGLV5-48A0A075B6I7 105 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 OXTP01178 125 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 BATFQ16520 125 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 SMIM29Q86T20 159 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 CLEC2BQ92478 149 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 HERC1Q15751 4861 aa5.43□□□□□ -1.54
SMPD3-207ENST00000566466 XP32Q5T750 250 aa5.42□□□□□ -1.54
SMPD3-207ENST00000566466 C3orf22Q8N5N4 141 aa5.42□□□□□ -1.54
SMPD3-207ENST00000566466 PCP4L1A6NKN8 68 aa5.41□□□□□ -1.54
SMPD3-207ENST00000566466 Q1RN00 199 aa5.41□□□□□ -1.54
SMPD3-207ENST00000566466 FAM229BQ4G0N7 80 aa5.41□□□□□ -1.54
SMPD3-207ENST00000566466 Q8N377 158 aa5.41□□□□□ -1.54
SMPD3-207ENST00000566466 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
SMPD3-207ENST00000566466 Q6ZQY7 126 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms