RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 UBR4Q5T4S7 5183 aa10.84□□□□□ -0.67
RAB40C-210ENST00000566290 A0A087WYN8 130 aa10.84□□□□□ -0.67
RAB40C-210ENST00000566290 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
RAB40C-210ENST00000566290 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
RAB40C-210ENST00000566290 DMBT1Q9UGM3 2413 aaPredicted RBP10.83□□□□□ -0.68
RAB40C-210ENST00000566290 PSCAO43653 123 aa10.83□□□□□ -0.68
RAB40C-210ENST00000566290 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
RAB40C-210ENST00000566290 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 LECT2O14960 151 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 BAALC-AS2P0C853 105 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 C1orf134Q5TEV5 83 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 Q8N814 137 aa10.82□□□□□ -0.68
RAB40C-210ENST00000566290 ZNF73O43830 326 aaPredicted RBP10.81□□□□□ -0.68
RAB40C-210ENST00000566290 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
RAB40C-210ENST00000566290 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
RAB40C-210ENST00000566290 LRCOL1A6NCL2 159 aa10.8□□□□□ -0.68
RAB40C-210ENST00000566290 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
RAB40C-210ENST00000566290 KCNQ1DNQ9H478 68 aa10.8□□□□□ -0.68
RAB40C-210ENST00000566290 ORMDL1Q9P0S3 153 aa10.8□□□□□ -0.68
RAB40C-210ENST00000566290 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
RAB40C-210ENST00000566290 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
RAB40C-210ENST00000566290 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
RAB40C-210ENST00000566290 OBSCN-AS1Q96MR7 158 aa10.79□□□□□ -0.68
RAB40C-210ENST00000566290 DNAH5Q8TE73 4624 aa10.79□□□□□ -0.68
RAB40C-210ENST00000566290 C16orf90A8MZG2 172 aa10.78□□□□□ -0.68
RAB40C-210ENST00000566290 GHRHP01286 108 aa10.78□□□□□ -0.68
RAB40C-210ENST00000566290 VPS25Q9BRG1 176 aa10.78□□□□□ -0.68
RAB40C-210ENST00000566290 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
RAB40C-210ENST00000566290 PRYO14603 147 aa10.77□□□□□ -0.69
RAB40C-210ENST00000566290 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
RAB40C-210ENST00000566290 TNP2Q05952 138 aa10.77□□□□□ -0.69
RAB40C-210ENST00000566290 Q8N1X5 172 aa10.77□□□□□ -0.69
RAB40C-210ENST00000566290 hADV29S1A0JD25 119 aa10.75□□□□□ -0.69
RAB40C-210ENST00000566290 TMEM256-PLSCR3K7ERE1 68 aa10.75□□□□□ -0.69
RAB40C-210ENST00000566290 COX7BP24311 80 aa10.75□□□□□ -0.69
RAB40C-210ENST00000566290 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
RAB40C-210ENST00000566290 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
RAB40C-210ENST00000566290 ACYP1P07311 99 aa10.74□□□□□ -0.69
RAB40C-210ENST00000566290 SPRR1AP35321 89 aa10.74□□□□□ -0.69
RAB40C-210ENST00000566290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.74□□□□□ -0.69
RAB40C-210ENST00000566290 LINC00528Q8N1L1 170 aa10.74□□□□□ -0.69
RAB40C-210ENST00000566290 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
RAB40C-210ENST00000566290 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
RAB40C-210ENST00000566290 JMJD7-PLA2G4BH0Y9G9 81 aa10.72□□□□□ -0.69
RAB40C-210ENST00000566290 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.69
RAB40C-210ENST00000566290 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
RAB40C-210ENST00000566290 GAGE2BQ13066 116 aa10.7□□□□□ -0.7
RAB40C-210ENST00000566290 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
RAB40C-210ENST00000566290 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
RAB40C-210ENST00000566290 C21orf62-AS1Q17RA5 79 aa10.69□□□□□ -0.7
RAB40C-210ENST00000566290 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
RAB40C-210ENST00000566290 A0A096LNI7 61 aa10.68□□□□□ -0.7
RAB40C-210ENST00000566290 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
RAB40C-210ENST00000566290 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
RAB40C-210ENST00000566290 A0A087WTM6 91 aa10.65□□□□□ -0.7
RAB40C-210ENST00000566290 Q6ZRX8 168 aa10.65□□□□□ -0.7
RAB40C-210ENST00000566290 FAM168BA1KXE4 195 aa10.64□□□□□ -0.71
RAB40C-210ENST00000566290 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
RAB40C-210ENST00000566290 Q6ZQY7 126 aa10.64□□□□□ -0.71
RAB40C-210ENST00000566290 MYCBP2O75592 4640 aa10.64□□□□□ -0.71
RAB40C-210ENST00000566290 FAT1Q14517 4588 aa10.63□□□□□ -0.71
RAB40C-210ENST00000566290 KRTAP10-2P60368 255 aa10.63□□□□□ -0.71
RAB40C-210ENST00000566290 SIGMAR1Q99720 223 aa10.63□□□□□ -0.71
RAB40C-210ENST00000566290 B5MCH6 92 aa10.62□□□□□ -0.71
RAB40C-210ENST00000566290 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
RAB40C-210ENST00000566290 SRRM2Q9UQ35 2752 aaKnown RBP10.62□□□□□ -0.71
RAB40C-210ENST00000566290 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.61□□□□□ -0.71
RAB40C-210ENST00000566290 PDE6GP18545 87 aa10.61□□□□□ -0.71
RAB40C-210ENST00000566290 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■□□ 19.1
RAB40C-210ENST00000566290 SCGB1A1P11684 91 aa10.6□□□□□ -0.71
RAB40C-210ENST00000566290 LOC110117498A0A087WWA1 95 aa10.59□□□□□ -0.71
RAB40C-210ENST00000566290 ETDCA0A1B0GVM5 59 aa10.59□□□□□ -0.71
RAB40C-210ENST00000566290 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
RAB40C-210ENST00000566290 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
RAB40C-210ENST00000566290 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
RAB40C-210ENST00000566290 H0Y9J4 135 aa10.57□□□□□ -0.72
RAB40C-210ENST00000566290 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
RAB40C-210ENST00000566290 CCKP06307 115 aa10.56□□□□□ -0.72
RAB40C-210ENST00000566290 XGP55808 180 aa10.56□□□□□ -0.72
RAB40C-210ENST00000566290 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
RAB40C-210ENST00000566290 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
RAB40C-210ENST00000566290 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
RAB40C-210ENST00000566290 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
RAB40C-210ENST00000566290 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
RAB40C-210ENST00000566290 Q9BRP9 147 aa10.53□□□□□ -0.72
RAB40C-210ENST00000566290 TRBV7-4A0A0J9YYF1 115 aa10.52□□□□□ -0.73
RAB40C-210ENST00000566290 Q6Q795 121 aa10.52□□□□□ -0.73
RAB40C-210ENST00000566290 LINC00643Q86TS7 51 aa10.52□□□□□ -0.73
RAB40C-210ENST00000566290 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
RAB40C-210ENST00000566290 GAGE2AQ6NT46 116 aa10.51□□□□□ -0.73
RAB40C-210ENST00000566290 Q6ZQT0 140 aa10.51□□□□□ -0.73
RAB40C-210ENST00000566290 LAMTOR3Q9UHA4 124 aa10.51□□□□□ -0.73
RAB40C-210ENST00000566290 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
RAB40C-210ENST00000566290 CHTF8P0CG12 524 aa10.49□□□□□ -0.73
RAB40C-210ENST00000566290 IMUPQ9GZP8 106 aa10.49□□□□□ -0.73
RAB40C-210ENST00000566290 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
RAB40C-210ENST00000566290 TRBV7-7A0A0K0K1E9 115 aa10.48□□□□□ -0.73
RAB40C-210ENST00000566290 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
RAB40C-210ENST00000566290 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms