RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 KRTAP2-3P0C7H8 128 aa8.16□□□□□ -1.1
CLK3-217ENST00000566126 KRTAP2-4Q9BYR9 128 aa8.16□□□□□ -1.1
CLK3-217ENST00000566126 A0A0G2JQZ4 141 aa8.15□□□□□ -1.1
CLK3-217ENST00000566126 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
CLK3-217ENST00000566126 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
CLK3-217ENST00000566126 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
CLK3-217ENST00000566126 OBSCN-AS1Q96MR7 158 aa8.15□□□□□ -1.1
CLK3-217ENST00000566126 NDUFA6P56556 154 aa8.14□□□□□ -1.11
CLK3-217ENST00000566126 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
CLK3-217ENST00000566126 TRAV23DV6A0A075B6W5 121 aa8.13□□□□□ -1.11
CLK3-217ENST00000566126 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
CLK3-217ENST00000566126 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
CLK3-217ENST00000566126 ZNF73O43830 326 aaPredicted RBP8.12□□□□□ -1.11
CLK3-217ENST00000566126 LOC107984156A0A0G2JMH3 177 aa8.11□□□□□ -1.11
CLK3-217ENST00000566126 AKR1D1P51857 326 aa8.11□□□□□ -1.11
CLK3-217ENST00000566126 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
CLK3-217ENST00000566126 ARL17AQ8IVW1 177 aa8.11□□□□□ -1.11
CLK3-217ENST00000566126 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
CLK3-217ENST00000566126 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
CLK3-217ENST00000566126 KRTAP5-9P26371 169 aa8.08□□□□□ -1.12
CLK3-217ENST00000566126 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
CLK3-217ENST00000566126 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
CLK3-217ENST00000566126 TCL1BO95988 128 aa8.06□□□□□ -1.12
CLK3-217ENST00000566126 HERV-K104P63124 156 aa8.05□□□□□ -1.12
CLK3-217ENST00000566126 TCTE3Q8IZS6 198 aa8.05□□□□□ -1.12
CLK3-217ENST00000566126 MPLKIPQ8TAP9 179 aa8.05□□□□□ -1.12
CLK3-217ENST00000566126 A0A096LNJ9 63 aa8.04□□□□□ -1.12
CLK3-217ENST00000566126 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
CLK3-217ENST00000566126 DEFB105AQ8NG35 78 aa8.03□□□□□ -1.12
CLK3-217ENST00000566126 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
CLK3-217ENST00000566126 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
CLK3-217ENST00000566126 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
CLK3-217ENST00000566126 Q96NJ1 140 aa8.02□□□□□ -1.13
CLK3-217ENST00000566126 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
CLK3-217ENST00000566126 HINT1P49773 126 aaPredicted RBP8.01□□□□□ -1.13
CLK3-217ENST00000566126 TAL2Q16559 108 aa8.01□□□□□ -1.13
CLK3-217ENST00000566126 NDUFC2O95298 119 aa8□□□□□ -1.13
CLK3-217ENST00000566126 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
CLK3-217ENST00000566126 PEA15Q15121 130 aa7.99□□□□□ -1.13
CLK3-217ENST00000566126 A8MUU9 505 aa7.98□□□□□ -1.13
CLK3-217ENST00000566126 HRES1P13985 223 aa7.98□□□□□ -1.13
CLK3-217ENST00000566126 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
CLK3-217ENST00000566126 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
CLK3-217ENST00000566126 HBDP02042 147 aa7.97□□□□□ -1.13
CLK3-217ENST00000566126 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
CLK3-217ENST00000566126 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
CLK3-217ENST00000566126 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
CLK3-217ENST00000566126 ANAPC16Q96DE5 110 aa7.94□□□□□ -1.14
CLK3-217ENST00000566126 MIEN1Q9BRT3 115 aa7.94□□□□□ -1.14
CLK3-217ENST00000566126 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
CLK3-217ENST00000566126 SOSTDC1Q6X4U4 206 aa7.92□□□□□ -1.14
CLK3-217ENST00000566126 Q6ZVH6 145 aa7.92□□□□□ -1.14
CLK3-217ENST00000566126 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
CLK3-217ENST00000566126 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
CLK3-217ENST00000566126 PMCHL1Q16048 86 aa7.91□□□□□ -1.14
CLK3-217ENST00000566126 COMMD7Q86VX2 200 aa7.91□□□□□ -1.14
CLK3-217ENST00000566126 URB1-AS1Q96HZ7 61 aa7.91□□□□□ -1.14
CLK3-217ENST00000566126 RPS10P5Q9NQ39 176 aa7.91□□□□□ -1.14
CLK3-217ENST00000566126 A6NN06 94 aa7.9□□□□□ -1.14
CLK3-217ENST00000566126 TSPEAR-AS2P59090 65 aa7.9□□□□□ -1.14
CLK3-217ENST00000566126 CBY1Q9Y3M2 126 aa7.89□□□□□ -1.15
CLK3-217ENST00000566126 IGLV5-48A0A075B6I7 105 aa7.88□□□□□ -1.15
CLK3-217ENST00000566126 A8MWP4 228 aa7.88□□□□□ -1.15
CLK3-217ENST00000566126 GPR98Q8WXG9 6306 aa7.87□□□□□ -1.15
CLK3-217ENST00000566126 COX7BP24311 80 aa7.87□□□□□ -1.15
CLK3-217ENST00000566126 NPC2P61916 151 aa7.87□□□□□ -1.15
CLK3-217ENST00000566126 KRTAP2-2Q9BYT5 123 aa7.85□□□□□ -1.15
CLK3-217ENST00000566126 KRTAP2-1Q9BYU5 128 aa7.85□□□□□ -1.15
CLK3-217ENST00000566126 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
CLK3-217ENST00000566126 hCG_2014768A0A024R1R8 64 aa7.83□□□□□ -1.16
CLK3-217ENST00000566126 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
CLK3-217ENST00000566126 RHEBQ15382 184 aa7.83□□□□□ -1.16
CLK3-217ENST00000566126 OR13C6PQ8NH95 151 aa7.83□□□□□ -1.16
CLK3-217ENST00000566126 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
CLK3-217ENST00000566126 LINC00614P0C842 121 aa7.81□□□□□ -1.16
CLK3-217ENST00000566126 IFITM2Q01629 132 aa7.8□□□□□ -1.16
CLK3-217ENST00000566126 ADAMTSL4-AS1Q5T5F5 129 aa7.8□□□□□ -1.16
CLK3-217ENST00000566126 LEPROTO15243 131 aa7.78□□□□□ -1.16
CLK3-217ENST00000566126 FABP9Q0Z7S8 132 aa7.77□□□□□ -1.17
CLK3-217ENST00000566126 C18orf32Q8TCD1 76 aa7.76□□□□□ -1.17
CLK3-217ENST00000566126 J3QQQ9 107 aa7.74□□□□□ -1.17
CLK3-217ENST00000566126 LST1O00453 97 aa7.74□□□□□ -1.17
CLK3-217ENST00000566126 SPANXDQ9BXN6 97 aa7.74□□□□□ -1.17
CLK3-217ENST00000566126 SPANXCQ9NY87 97 aa7.74□□□□□ -1.17
CLK3-217ENST00000566126 MTURNQ8N3F0 131 aa7.73□□□□□ -1.17
CLK3-217ENST00000566126 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
CLK3-217ENST00000566126 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
CLK3-217ENST00000566126 TRBV7-6A0A0J9YX20 115 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 SPRR2EP22531 72 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 SPRR2BP35325 72 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 SPRR2AP35326 72 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 NMUP48645 174 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 DSCR10P59022 87 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 SEC11CQ9BY50 192 aa7.71□□□□□ -1.18
CLK3-217ENST00000566126 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
CLK3-217ENST00000566126 F8WEM9 126 aa7.69□□□□□ -1.18
CLK3-217ENST00000566126 MT1BP07438 61 aa7.68□□□□□ -1.18
CLK3-217ENST00000566126 Q6JHZ5 121 aa7.68□□□□□ -1.18
CLK3-217ENST00000566126 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
CLK3-217ENST00000566126 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms