RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SMIM11BQ8TCY0 68 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 C16orf90A8MZG2 172 aa8.11□□□□□ -1.11
SF3B3-206ENST00000565990 H3BQ85 93 aa8.11□□□□□ -1.11
SF3B3-206ENST00000565990 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
SF3B3-206ENST00000565990 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
SF3B3-206ENST00000565990 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
SF3B3-206ENST00000565990 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
SF3B3-206ENST00000565990 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
SF3B3-206ENST00000565990 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
SF3B3-206ENST00000565990 Q6ZSA8 131 aa8.08□□□□□ -1.12
SF3B3-206ENST00000565990 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
SF3B3-206ENST00000565990 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
SF3B3-206ENST00000565990 BIRC6Q9NR09 4857 aa8.07□□□□□ -1.12
SF3B3-206ENST00000565990 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
SF3B3-206ENST00000565990 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
SF3B3-206ENST00000565990 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
SF3B3-206ENST00000565990 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
SF3B3-206ENST00000565990 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
SF3B3-206ENST00000565990 PFN2P35080 140 aa8.05□□□□□ -1.12
SF3B3-206ENST00000565990 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
SF3B3-206ENST00000565990 PKIGQ9Y2B9 76 aa8.05□□□□□ -1.12
SF3B3-206ENST00000565990 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-206ENST00000565990 A0A087WYN8 130 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 PANO1I0J062 215 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 TMEM256-PLSCR3K7ERE1 68 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 Q6ZRP5 223 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-206ENST00000565990 RYR1P21817 5038 aa8.03□□□□□ -1.12
SF3B3-206ENST00000565990 A0A096LNI7 61 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 CDK2AP2O75956 126 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 GHRHP01286 108 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 Q6JHZ5 121 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 LINC00474Q9P2X8 69 aa8.02□□□□□ -1.13
SF3B3-206ENST00000565990 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
SF3B3-206ENST00000565990 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
SF3B3-206ENST00000565990 CHTF8P0CG12 524 aa7.99□□□□□ -1.13
SF3B3-206ENST00000565990 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
SF3B3-206ENST00000565990 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
SF3B3-206ENST00000565990 CCKP06307 115 aa7.98□□□□□ -1.13
SF3B3-206ENST00000565990 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
SF3B3-206ENST00000565990 CIRBP-AS1Q8TBR5 109 aa7.98□□□□□ -1.13
SF3B3-206ENST00000565990 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
SF3B3-206ENST00000565990 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
SF3B3-206ENST00000565990 ATOX1O00244 68 aa7.97□□□□□ -1.13
SF3B3-206ENST00000565990 PDE6GP18545 87 aa7.97□□□□□ -1.13
SF3B3-206ENST00000565990 RPL18AQ02543 176 aaKnown RBP7.97□□□□□ -1.13
SF3B3-206ENST00000565990 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
SF3B3-206ENST00000565990 PLAC8Q9NZF1 115 aa7.97□□□□□ -1.13
SF3B3-206ENST00000565990 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 UQCRQO14949 82 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 SCXQ7RTU7 201 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 DPH3Q96FX2 82 aa7.96□□□□□ -1.14
SF3B3-206ENST00000565990 A0A1W2PNN7 141 aa7.95□□□□□ -1.14
SF3B3-206ENST00000565990 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
SF3B3-206ENST00000565990 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
SF3B3-206ENST00000565990 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
SF3B3-206ENST00000565990 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
SF3B3-206ENST00000565990 C14orf132Q9NPU4 83 aa7.94□□□□□ -1.14
SF3B3-206ENST00000565990 B5MCH6 92 aa7.93□□□□□ -1.14
SF3B3-206ENST00000565990 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
SF3B3-206ENST00000565990 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
SF3B3-206ENST00000565990 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
SF3B3-206ENST00000565990 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
SF3B3-206ENST00000565990 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
SF3B3-206ENST00000565990 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
SF3B3-206ENST00000565990 BCE1O60756 84 aa7.92□□□□□ -1.14
SF3B3-206ENST00000565990 HAMPP81172 84 aa7.91□□□□□ -1.14
SF3B3-206ENST00000565990 C6orf99Q4VX62 202 aa7.91□□□□□ -1.14
SF3B3-206ENST00000565990 HSPG2P98160 4391 aa7.91□□□□□ -1.14
SF3B3-206ENST00000565990 COX7CP15954 63 aa7.9□□□□□ -1.14
SF3B3-206ENST00000565990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-206ENST00000565990 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.14
SF3B3-206ENST00000565990 LINC00846Q9NV44 126 aa7.9□□□□□ -1.14
SF3B3-206ENST00000565990 IGLV5-37A0A075B6J1 123 aa7.89□□□□□ -1.15
SF3B3-206ENST00000565990 NCR3O14931 201 aa7.89□□□□□ -1.15
SF3B3-206ENST00000565990 SERTAD4-AS1Q5TG53 156 aa7.89□□□□□ -1.15
SF3B3-206ENST00000565990 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
SF3B3-206ENST00000565990 HERC2O95714 4834 aa7.89□□□□□ -1.15
SF3B3-206ENST00000565990 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
SF3B3-206ENST00000565990 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
SF3B3-206ENST00000565990 SMR3BP02814 79 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-206ENST00000565990 CRYGAP11844 174 aa7.87□□□□□ -1.15
SF3B3-206ENST00000565990 VPREB1P12018 145 aa7.87□□□□□ -1.15
SF3B3-206ENST00000565990 Q8NDZ9 215 aa7.87□□□□□ -1.15
SF3B3-206ENST00000565990 FAT1Q14517 4588 aa7.87□□□□□ -1.15
SF3B3-206ENST00000565990 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
SF3B3-206ENST00000565990 M0R378 163 aa7.86□□□□□ -1.15
SF3B3-206ENST00000565990 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-206ENST00000565990 Q8N1X5 172 aa7.86□□□□□ -1.15
SF3B3-206ENST00000565990 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
SF3B3-206ENST00000565990 Q6ZQT0 140 aa7.85□□□□□ -1.15
SF3B3-206ENST00000565990 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms