RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
RAB40C-209ENST00000565511 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
RAB40C-209ENST00000565511 S100A7L2Q5SY68 101 aa13.28□□□□□ -0.28
RAB40C-209ENST00000565511 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.29
RAB40C-209ENST00000565511 E9PLD3 99 aa13.26□□□□□ -0.29
RAB40C-209ENST00000565511 SSBP3-AS1Q7Z2R9 100 aa13.26□□□□□ -0.29
RAB40C-209ENST00000565511 ASB16-AS1Q495Z4 193 aa13.25□□□□□ -0.29
RAB40C-209ENST00000565511 LITAFQ99732 161 aa13.25□□□□□ -0.29
RAB40C-209ENST00000565511 ZNF73O43830 326 aaPredicted RBP13.24□□□□□ -0.29
RAB40C-209ENST00000565511 RPS29P62273 56 aaKnown RBP13.23□□□□□ -0.29
RAB40C-209ENST00000565511 C9orf153Q5TBE3 101 aa13.2□□□□□ -0.3
RAB40C-209ENST00000565511 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
RAB40C-209ENST00000565511 JOSD1Q15040 202 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-209ENST00000565511 LINC00308Q8TCZ7 52 aa13.18□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 TTTY13Q9BZ97 58 aa13.17□□□□□ -0.3
RAB40C-209ENST00000565511 SLC25A20O43772 301 aa13.16□□□□□ -0.3
RAB40C-209ENST00000565511 LINC01545Q5VT33 79 aa13.14□□□□□ -0.31
RAB40C-209ENST00000565511 SPANXCQ9NY87 97 aa13.13□□□□□ -0.31
RAB40C-209ENST00000565511 TIMM17BO60830 172 aa13.11□□□□□ -0.31
RAB40C-209ENST00000565511 XP32Q5T750 250 aa13.11□□□□□ -0.31
RAB40C-209ENST00000565511 SPRR1BP22528 89 aa13.1□□□□□ -0.31
RAB40C-209ENST00000565511 SEC61BP60468 96 aaKnown RBP13.1□□□□□ -0.31
RAB40C-209ENST00000565511 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
RAB40C-209ENST00000565511 ZNF815PA8K554 130 aa13.09□□□□□ -0.31
RAB40C-209ENST00000565511 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
RAB40C-209ENST00000565511 PET117Q6UWS5 81 aa13.06□□□□□ -0.32
RAB40C-209ENST00000565511 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
RAB40C-209ENST00000565511 SPANXDQ9BXN6 97 aa13.06□□□□□ -0.32
RAB40C-209ENST00000565511 C3orf79P0CE67 100 aa13.05□□□□□ -0.32
RAB40C-209ENST00000565511 HINT1P49773 126 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-209ENST00000565511 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
RAB40C-209ENST00000565511 C6orf99Q4VX62 202 aa13.03□□□□□ -0.32
RAB40C-209ENST00000565511 DHRS4-AS1Q9P1J3 65 aa13.03□□□□□ -0.32
RAB40C-209ENST00000565511 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.33
RAB40C-209ENST00000565511 COX7BP24311 80 aa13.01□□□□□ -0.33
RAB40C-209ENST00000565511 KRTAP9-6A0A140TA67 174 aa12.99□□□□□ -0.33
RAB40C-209ENST00000565511 LINC01547P58512 204 aaPredicted RBP12.99□□□□□ -0.33
RAB40C-209ENST00000565511 Q1RN00 199 aa12.98□□□□□ -0.33
RAB40C-209ENST00000565511 ANKRD39Q53RE8 183 aa12.98□□□□□ -0.33
RAB40C-209ENST00000565511 LCE2CQ5TA81 110 aa12.98□□□□□ -0.33
RAB40C-209ENST00000565511 KRTDAPP60985 99 aa12.97□□□□□ -0.33
RAB40C-209ENST00000565511 LAMTOR3Q9UHA4 124 aa12.96□□□□□ -0.33
RAB40C-209ENST00000565511 KRTAP19-2Q3LHN2 52 aa12.95□□□□□ -0.34
RAB40C-209ENST00000565511 DEFB105AQ8NG35 78 aa12.95□□□□□ -0.34
RAB40C-209ENST00000565511 C9orf92A6NGG3 77 aa12.94□□□□□ -0.34
RAB40C-209ENST00000565511 COA6Q5JTJ3 125 aaKnown RBP12.94□□□□□ -0.34
RAB40C-209ENST00000565511 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
RAB40C-209ENST00000565511 SMIM29Q86T20 159 aa12.94□□□□□ -0.34
RAB40C-209ENST00000565511 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
RAB40C-209ENST00000565511 LIMD2Q9BT23 127 aa12.94□□□□□ -0.34
RAB40C-209ENST00000565511 A0A0G2JQZ4 141 aa12.92□□□□□ -0.34
RAB40C-209ENST00000565511 ATOH7Q8N100 152 aa12.92□□□□□ -0.34
RAB40C-209ENST00000565511 TAL2Q16559 108 aa12.91□□□□□ -0.34
RAB40C-209ENST00000565511 H7C2G1 150 aa12.9□□□□□ -0.34
RAB40C-209ENST00000565511 PCOTHQ58A44 107 aa12.9□□□□□ -0.34
RAB40C-209ENST00000565511 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
RAB40C-209ENST00000565511 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
RAB40C-209ENST00000565511 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
RAB40C-209ENST00000565511 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
RAB40C-209ENST00000565511 MUSTN1Q8IVN3 82 aa12.87□□□□□ -0.35
RAB40C-209ENST00000565511 CD164Q04900 197 aa12.86□□□□□ -0.35
RAB40C-209ENST00000565511 IGLV5-48A0A075B6I7 105 aa12.85□□□□□ -0.35
RAB40C-209ENST00000565511 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
RAB40C-209ENST00000565511 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
RAB40C-209ENST00000565511 A6NDN8 102 aa12.84□□□□□ -0.35
RAB40C-209ENST00000565511 IFITM1P13164 125 aa12.84□□□□□ -0.35
RAB40C-209ENST00000565511 IGLV8-61A0A075B6I0 122 aa12.81□□□□□ -0.36
RAB40C-209ENST00000565511 C20orf202A1L168 122 aa12.81□□□□□ -0.36
RAB40C-209ENST00000565511 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
RAB40C-209ENST00000565511 C1orf195Q5TG92 126 aa12.81□□□□□ -0.36
RAB40C-209ENST00000565511 MT1HP80294 61 aa12.79□□□□□ -0.36
RAB40C-209ENST00000565511 Q5XG85 94 aa12.79□□□□□ -0.36
RAB40C-209ENST00000565511 SMIM11BQ8TCY0 68 aa12.79□□□□□ -0.36
RAB40C-209ENST00000565511 AKR1D1P51857 326 aa12.78□□□□□ -0.36
RAB40C-209ENST00000565511 Q6ZVH6 145 aa12.78□□□□□ -0.36
RAB40C-209ENST00000565511 COPS9Q8WXC6 57 aa12.77□□□□□ -0.37
RAB40C-209ENST00000565511 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
RAB40C-209ENST00000565511 A4D1N5 150 aa12.7□□□□□ -0.38
RAB40C-209ENST00000565511 RPL37P61927 97 aaKnown RBP12.66□□□□□ -0.38
RAB40C-209ENST00000565511 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
RAB40C-209ENST00000565511 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
RAB40C-209ENST00000565511 LINC00575Q6W349 94 aa12.64□□□□□ -0.39
RAB40C-209ENST00000565511 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
RAB40C-209ENST00000565511 FLGP20930 4061 aaPredicted RBP12.64□□□□□ -0.39
RAB40C-209ENST00000565511 FSIP2Q5CZC0 6907 aa12.61□□□□□ -0.39
RAB40C-209ENST00000565511 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
RAB40C-209ENST00000565511 Q6ZQY7 126 aa12.61□□□□□ -0.39
RAB40C-209ENST00000565511 LORP23490 312 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-209ENST00000565511 CRCT1Q9UGL9 99 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms