RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 MIEN1Q9BRT3 115 aa8.7□□□□□ -1.02
CDH11-210ENST00000564770 NPC2P61916 151 aa8.69□□□□□ -1.02
CDH11-210ENST00000564770 MT1HP80294 61 aa8.69□□□□□ -1.02
CDH11-210ENST00000564770 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
CDH11-210ENST00000564770 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
CDH11-210ENST00000564770 PLNP26678 52 aa8.68□□□□□ -1.02
CDH11-210ENST00000564770 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
CDH11-210ENST00000564770 JOSD1Q15040 202 aaPredicted RBP8.67□□□□□ -1.02
CDH11-210ENST00000564770 SERF1AO75920 110 aa8.66□□□□□ -1.02
CDH11-210ENST00000564770 NMUP48645 174 aa8.66□□□□□ -1.02
CDH11-210ENST00000564770 PCOTHQ58A44 107 aa8.66□□□□□ -1.02
CDH11-210ENST00000564770 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
CDH11-210ENST00000564770 DPM2O94777 84 aa8.65□□□□□ -1.02
CDH11-210ENST00000564770 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
CDH11-210ENST00000564770 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
CDH11-210ENST00000564770 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
CDH11-210ENST00000564770 HERVK_113P61574 105 aa8.64□□□□□ -1.03
CDH11-210ENST00000564770 IGKCP01834 107 aa8.63□□□□□ -1.03
CDH11-210ENST00000564770 TRGC2P03986 189 aa8.63□□□□□ -1.03
CDH11-210ENST00000564770 SPRR1BP22528 89 aa8.63□□□□□ -1.03
CDH11-210ENST00000564770 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
CDH11-210ENST00000564770 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
CDH11-210ENST00000564770 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
CDH11-210ENST00000564770 FABP4P15090 132 aa8.62□□□□□ -1.03
CDH11-210ENST00000564770 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
CDH11-210ENST00000564770 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
CDH11-210ENST00000564770 LITAFQ99732 161 aa8.59□□□□□ -1.03
CDH11-210ENST00000564770 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
CDH11-210ENST00000564770 E9PLD3 99 aa8.58□□□□□ -1.04
CDH11-210ENST00000564770 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
CDH11-210ENST00000564770 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CDH11-210ENST00000564770 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
CDH11-210ENST00000564770 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
CDH11-210ENST00000564770 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
CDH11-210ENST00000564770 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
CDH11-210ENST00000564770 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
CDH11-210ENST00000564770 Q1RN00 199 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 SLC7A5P1Q8MH63 180 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 DHRS4-AS1Q9P1J3 65 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 LAMTOR3Q9UHA4 124 aa8.54□□□□□ -1.04
CDH11-210ENST00000564770 H7C2G1 150 aa8.53□□□□□ -1.04
CDH11-210ENST00000564770 CBY1Q9Y3M2 126 aa8.53□□□□□ -1.04
CDH11-210ENST00000564770 C6orf99Q4VX62 202 aa8.52□□□□□ -1.05
CDH11-210ENST00000564770 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
CDH11-210ENST00000564770 CD164Q04900 197 aa8.51□□□□□ -1.05
CDH11-210ENST00000564770 COX7BP24311 80 aa8.5□□□□□ -1.05
CDH11-210ENST00000564770 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
CDH11-210ENST00000564770 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
CDH11-210ENST00000564770 TIMM17BO60830 172 aa8.49□□□□□ -1.05
CDH11-210ENST00000564770 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
CDH11-210ENST00000564770 C1orf195Q5TG92 126 aa8.48□□□□□ -1.05
CDH11-210ENST00000564770 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
CDH11-210ENST00000564770 PRO1933Q9H354 126 aa8.48□□□□□ -1.05
CDH11-210ENST00000564770 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
CDH11-210ENST00000564770 RPL37P61927 97 aaKnown RBP8.47□□□□□ -1.05
CDH11-210ENST00000564770 Q5XG85 94 aa8.47□□□□□ -1.05
CDH11-210ENST00000564770 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
CDH11-210ENST00000564770 COLCA2A8K830 154 aa8.46□□□□□ -1.06
CDH11-210ENST00000564770 TAL2Q16559 108 aa8.46□□□□□ -1.06
CDH11-210ENST00000564770 TEX49A0A1B0GTD5 131 aa8.45□□□□□ -1.06
CDH11-210ENST00000564770 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
CDH11-210ENST00000564770 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
CDH11-210ENST00000564770 M0R2T5 61 aa8.42□□□□□ -1.06
CDH11-210ENST00000564770 AKR1D1P51857 326 aa8.42□□□□□ -1.06
CDH11-210ENST00000564770 LINC00518Q8N0U6 118 aa8.42□□□□□ -1.06
CDH11-210ENST00000564770 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
CDH11-210ENST00000564770 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
CDH11-210ENST00000564770 A0A1B0GWB2 263 aa8.39□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
CDH11-210ENST00000564770 PET117Q6UWS5 81 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
CDH11-210ENST00000564770 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
CDH11-210ENST00000564770 A6NDN8 102 aa8.34□□□□□ -1.07
CDH11-210ENST00000564770 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
CDH11-210ENST00000564770 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
CDH11-210ENST00000564770 COA6Q5JTJ3 125 aaKnown RBP8.31□□□□□ -1.08
CDH11-210ENST00000564770 TCL1BO95988 128 aa8.3□□□□□ -1.08
CDH11-210ENST00000564770 IFITM1P13164 125 aa8.3□□□□□ -1.08
CDH11-210ENST00000564770 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
CDH11-210ENST00000564770 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
CDH11-210ENST00000564770 A4D1N5 150 aa8.29□□□□□ -1.08
CDH11-210ENST00000564770 S100A1P23297 94 aa8.29□□□□□ -1.08
CDH11-210ENST00000564770 KRTDAPP60985 99 aa8.28□□□□□ -1.08
CDH11-210ENST00000564770 PCP2Q8IVA1 136 aa8.28□□□□□ -1.08
CDH11-210ENST00000564770 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
CDH11-210ENST00000564770 NHP2Q9NX24 153 aaKnown RBP8.28□□□□□ -1.08
CDH11-210ENST00000564770 ATOH7Q8N100 152 aa8.27□□□□□ -1.09
CDH11-210ENST00000564770 SSPOA2VEC9 5147 aa8.27□□□□□ -1.09
CDH11-210ENST00000564770 USH2AO75445 5202 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms