RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SACSQ9NZJ4 4579 aa9.94□□□□□ -0.82
COMMD4-210ENST00000564587 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
COMMD4-210ENST00000564587 hADV29S1A0JD25 119 aa9.94□□□□□ -0.82
COMMD4-210ENST00000564587 ELOF1P60002 83 aaKnown RBP9.94□□□□□ -0.82
COMMD4-210ENST00000564587 SDIM1Q6ZPB5 146 aa9.94□□□□□ -0.82
COMMD4-210ENST00000564587 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
COMMD4-210ENST00000564587 ORMDL1Q9P0S3 153 aa9.94□□□□□ -0.82
COMMD4-210ENST00000564587 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
COMMD4-210ENST00000564587 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
COMMD4-210ENST00000564587 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
COMMD4-210ENST00000564587 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
COMMD4-210ENST00000564587 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
COMMD4-210ENST00000564587 TMEM256-PLSCR3K7ERE1 68 aa9.9□□□□□ -0.82
COMMD4-210ENST00000564587 RTL8CO15255 209 aa9.9□□□□□ -0.82
COMMD4-210ENST00000564587 SPRR1AP35321 89 aa9.89□□□□□ -0.83
COMMD4-210ENST00000564587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-210ENST00000564587 LINC00528Q8N1L1 170 aa9.89□□□□□ -0.83
COMMD4-210ENST00000564587 A0A1W2PNN7 141 aa9.88□□□□□ -0.83
COMMD4-210ENST00000564587 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 IGLV5-52A0A0A0MRZ9 124 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 LYSTQ99698 3801 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 DHRS4-AS1Q9P1J3 65 aa9.87□□□□□ -0.83
COMMD4-210ENST00000564587 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
COMMD4-210ENST00000564587 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
COMMD4-210ENST00000564587 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
COMMD4-210ENST00000564587 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
COMMD4-210ENST00000564587 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
COMMD4-210ENST00000564587 LCE6AA0A183 80 aa9.84□□□□□ -0.83
COMMD4-210ENST00000564587 EPM2AB3EWF7 344 aa9.84□□□□□ -0.83
COMMD4-210ENST00000564587 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-210ENST00000564587 TNP2Q05952 138 aa9.84□□□□□ -0.83
COMMD4-210ENST00000564587 Q6ZRX8 168 aa9.84□□□□□ -0.83
COMMD4-210ENST00000564587 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
COMMD4-210ENST00000564587 TEX49A0A1B0GTD5 131 aa9.83□□□□□ -0.84
COMMD4-210ENST00000564587 B5MCH6 92 aa9.83□□□□□ -0.84
COMMD4-210ENST00000564587 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
COMMD4-210ENST00000564587 UBE2BP63146 152 aa9.82□□□□□ -0.84
COMMD4-210ENST00000564587 Q6ZQY7 126 aa9.82□□□□□ -0.84
COMMD4-210ENST00000564587 OBSCN-AS1Q96MR7 158 aa9.8□□□□□ -0.84
COMMD4-210ENST00000564587 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
COMMD4-210ENST00000564587 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
COMMD4-210ENST00000564587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
COMMD4-210ENST00000564587 RYR1P21817 5038 aa9.77□□□□□ -0.84
COMMD4-210ENST00000564587 H0Y9J4 135 aa9.77□□□□□ -0.85
COMMD4-210ENST00000564587 HERC2O95714 4834 aa9.77□□□□□ -0.85
COMMD4-210ENST00000564587 FAM240AA0A1B0GVK7 77 aa9.76□□□□□ -0.85
COMMD4-210ENST00000564587 ACYP1P07311 99 aa9.76□□□□□ -0.85
COMMD4-210ENST00000564587 C21orf62-AS1Q17RA5 79 aa9.76□□□□□ -0.85
COMMD4-210ENST00000564587 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
COMMD4-210ENST00000564587 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
COMMD4-210ENST00000564587 PANO1I0J062 215 aa9.75□□□□□ -0.85
COMMD4-210ENST00000564587 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
COMMD4-210ENST00000564587 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
COMMD4-210ENST00000564587 LAMTOR3Q9UHA4 124 aa9.75□□□□□ -0.85
COMMD4-210ENST00000564587 PDE6GP18545 87 aa9.73□□□□□ -0.85
COMMD4-210ENST00000564587 Q9BRP9 147 aa9.73□□□□□ -0.85
COMMD4-210ENST00000564587 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
COMMD4-210ENST00000564587 RBM3P98179 157 aaKnown RBP9.72□□□□□ -0.85
COMMD4-210ENST00000564587 BCE1O60756 84 aa9.71□□□□□ -0.86
COMMD4-210ENST00000564587 IGLV5-48A0A075B6I7 105 aa9.7□□□□□ -0.86
COMMD4-210ENST00000564587 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
COMMD4-210ENST00000564587 KRTAP10-2P60368 255 aa9.7□□□□□ -0.86
COMMD4-210ENST00000564587 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
COMMD4-210ENST00000564587 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
COMMD4-210ENST00000564587 UBE2AP49459 152 aa9.69□□□□□ -0.86
COMMD4-210ENST00000564587 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
COMMD4-210ENST00000564587 DSCR8Q96T75 97 aa9.68□□□□□ -0.86
COMMD4-210ENST00000564587 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
COMMD4-210ENST00000564587 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
COMMD4-210ENST00000564587 CCKP06307 115 aa9.67□□□□□ -0.86
COMMD4-210ENST00000564587 PRLHP81277 87 aa9.66□□□□□ -0.86
COMMD4-210ENST00000564587 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
COMMD4-210ENST00000564587 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
COMMD4-210ENST00000564587 Q8N377 158 aa9.66□□□□□ -0.86
COMMD4-210ENST00000564587 DNAH17Q9UFH2 4485 aa9.65□□□□□ -0.86
COMMD4-210ENST00000564587 LINC01547P58512 204 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-210ENST00000564587 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.86
COMMD4-210ENST00000564587 HIGD2AQ9BW72 106 aa9.65□□□□□ -0.86
COMMD4-210ENST00000564587 ERC2-IT1O76042 136 aa9.64□□□□□ -0.87
COMMD4-210ENST00000564587 Q6ZSA8 131 aa9.64□□□□□ -0.87
COMMD4-210ENST00000564587 CDIP1Q9H305 208 aa9.64□□□□□ -0.87
COMMD4-210ENST00000564587 TRBV7-4A0A0J9YYF1 115 aa9.62□□□□□ -0.87
COMMD4-210ENST00000564587 Q6ZQT0 140 aa9.62□□□□□ -0.87
COMMD4-210ENST00000564587 KRTAP13-1Q8IUC0 172 aa9.62□□□□□ -0.87
COMMD4-210ENST00000564587 ST20-AS1Q8NBB2 130 aa9.61□□□□□ -0.87
COMMD4-210ENST00000564587 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
COMMD4-210ENST00000564587 A0A1B0GV72 72 aa9.6□□□□□ -0.87
COMMD4-210ENST00000564587 SPRR1BP22528 89 aa9.6□□□□□ -0.87
COMMD4-210ENST00000564587 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
COMMD4-210ENST00000564587 PSORS1C2Q9UIG4 136 aa9.6□□□□□ -0.87
COMMD4-210ENST00000564587 F8WEM9 126 aa9.59□□□□□ -0.87
COMMD4-210ENST00000564587 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
COMMD4-210ENST00000564587 FAM30AQ9NZY2 134 aa9.58□□□□□ -0.88
COMMD4-210ENST00000564587 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
COMMD4-210ENST00000564587 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
COMMD4-210ENST00000564587 C1orf137Q5JT78 98 aa9.57□□□□□ -0.88
COMMD4-210ENST00000564587 A0A1B0GW54 56 aa9.56□□□□□ -0.88
COMMD4-210ENST00000564587 ZNF861PO60384 105 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms